prot_L-elsbetiae_contig6591.15296.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6591.15296.1
Unique Nameprot_L-elsbetiae_contig6591.15296.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length179
Homology
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BLAST of mRNA_L-elsbetiae_contig6591.15296.1 vs. uniprot
Match: D7G6N7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6N7_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 5.470e-35
Identity = 73/115 (63.48%), Postives = 87/115 (75.65%), Query Frame = 0 
Query:    1 MRLVSFSKVSAFLLAATLISAPMADAGQKGEEGMDKAKEAVTELVAEE-VTEGFGVGERP-IHRHGAKMKAHKPRMATMGVRQTWDDCVGMDVEEAMEVIKAARPDMKRIVRVKE 113
            MR  SF K +A LLAATL SAPMA+AG  GE GM+KAKEA +  +AEE VTE   VGE P  H H  + K  KPRMATMGV+QTW +CVGMDVEEA+E+IKAARPD+++I +V E
Sbjct:    1 MRFASFPKATALLLAATLPSAPMAEAGHAGEAGMEKAKEASSRGLAEEGVTEEVMVGELPRSHPHEKEKKQRKPRMATMGVQQTWKECVGMDVEEAVEMIKAARPDLRKITKVPE 115
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6591.15296.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6N7_ECTSI5.470e-3563.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.10.10coord: 74..119
e-value: 2.9E-5
score: 26.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 144..163
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 164..178
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..143
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.724

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6591contigL-elsbetiae_contig6591:1497..3980 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6591.15296.1mRNA_L-elsbetiae_contig6591.15296.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6591 1497..4433 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6591.15296.1 ID=prot_L-elsbetiae_contig6591.15296.1|Name=mRNA_L-elsbetiae_contig6591.15296.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=179bp
MRLVSFSKVSAFLLAATLISAPMADAGQKGEEGMDKAKEAVTELVAEEVT
EGFGVGERPIHRHGAKMKAHKPRMATMGVRQTWDDCVGMDVEEAMEVIKA
ARPDMKRIVRVKEVSQSQYKSPFAAGTLAIIGKILASACVRACVRAFGVS
VCVCVCVCLPLLYRASSASSRSALLLFS*
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