prot_L-elsbetiae_contig6581.15286.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6581.15286.1
Unique Nameprot_L-elsbetiae_contig6581.15286.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length633
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6581.15286.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 147..225
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 308..312
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 379..398
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 247..283
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 75..124
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 313..336
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 399..632
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 337..347
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 284..307
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 226..246
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 368..378
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 348..367
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..146
NoneNo IPR availableTMHMMTMhelixcoord: 46..68
NoneNo IPR availableTMHMMTMhelixcoord: 225..247
NoneNo IPR availableTMHMMTMhelixcoord: 377..399
NoneNo IPR availableTMHMMTMhelixcoord: 345..367
NoneNo IPR availableTMHMMTMhelixcoord: 284..306
NoneNo IPR availableTMHMMTMhelixcoord: 316..338
NoneNo IPR availableTMHMMTMhelixcoord: 124..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6581contigL-elsbetiae_contig6581:3035..5067 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6581.15286.1mRNA_L-elsbetiae_contig6581.15286.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6581 2708..5308 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6581.15286.1 ID=prot_L-elsbetiae_contig6581.15286.1|Name=mRNA_L-elsbetiae_contig6581.15286.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=633bp
MFEWFVMEFVGLGDLVSDLTLVATTPSSDDVDDGSHPVTLWLLWGGTLIS
CIPLVALLIGICTGLVVVVGATLGAATKSAEGTRVLKSNFDQTRILLRYA
LSDSKTITRFVVFFAEGVPRKWDNAATLVAGFCLYVPLFPVAYPLVQALK
FWVDFVTRQNGVRAVDGPSREPAEAEEEEDAEEEEVPGLLWCLPLVFIQN
IGTFMTLAHSINVAVSLRDEILSEAIAAPVASIVFGIYFLWVSFLAPKKG
ESRESIMEQSFEQRMRNQAFADEEIIGVVRSRKFWLSFPAAVAGLAVLAL
PFVGLYFSQTASYHTLGVILASVGFALLGLLCWLALKGSFKTIGARLAFL
LSVPALISVGVGLVFHITRGYSDRNGNLFAGGLLVLLFSVPYGVREYFFS
STAALQAKEEEEQARWREFVEKLAADQEEPRQAERHERRQAAEKDEPQAR
ENQARRGKQEAEHAKRMEMTVKAMEEAMNPMNLTPGLVGDDEASKIDNEA
STKQAVEASKAYAKVWADICKQYTEGVGNQASRSAGGEPSTAFVEASTAS
VSRASMAASETCAESVRDQAPENAIEASMAAMAAMMEASKHCGETIGDQA
PEKAMESFMAAMAVMTEASTKYAENGKETRDG*
back to top