prot_L-elsbetiae_contig657.15272.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig657.15272.1
Unique Name	prot_L-elsbetiae_contig657.15272.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	207

Homology

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BLAST of mRNA_L-elsbetiae_contig657.15272.1 vs. uniprot
Match: A0A6H5L1Z1_9PHAE (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1Z1_9PHAE)

HSP 1 Score: 331 bits (848), Expect = 5.260e-113
Identity = 163/208 (78.37%), Postives = 177/208 (85.10%), Query Frame = 0

Query:    1 MRVRGSSLLCLSVAAHSQAFLIAPPASSRGSLGDACRSPARASAAPPLMAYDVKYSPNRWRDEGDIVPGFGGVWPGDPDAETHHVTYVNKAGEEVASLDVPVDRYIFFATEDAEVDVPIVNKKRMCRNGCCTTCAVKVLEGK--VKQEGALGLMKSLKQEGYALSCCSYPKSDLVLQLQEEDDVYMKQFGDDFEAGGVEWGGVFLDED 206
            MR R  +L+ L +A  S+AFL+AP          A    AR SAA PLMAYDVKYSPN+W DE DIVPGFGG+WPGDPDAETHHVTYVNKAGEEVAS DVPVDRYIFFATEDA VDVPI+NKKRMCRNGCCTTCAVKVLEGK  VKQEGALGL+K+L+QEGYAL+CCSYPKSDLV+QLQEEDDVYMKQFG+DFE GGVEWGG FLDED
Sbjct:   28 MRARAGALVWLLMAVQSRAFLVAPAVGGGVCRPRAAAGAARTSAASPLMAYDVKYSPNKWWDEDDIVPGFGGIWPGDPDAETHHVTYVNKAGEEVASADVPVDRYIFFATEDAGVDVPIINKKRMCRNGCCTTCAVKVLEGKARVKQEGALGLLKNLRQEGYALTCCSYPKSDLVVQLQEEDDVYMKQFGNDFEGGGVEWGGFFLDED 235

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BLAST of mRNA_L-elsbetiae_contig657.15272.1 vs. uniprot
Match: A0A835Z8Q8_9STRA (Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q8_9STRA)

HSP 1 Score: 219 bits (557), Expect = 4.720e-69
Identity = 115/218 (52.75%), Postives = 149/218 (68.35%), Query Frame = 0

Query:    1 MRVRGSSLLCLSVAAHSQAFLIAPPASSRGSLGDACRSPARASAAPP-----LMAYDVKYSPNRWRDEGDIVPGFGGVWPGDPDAETH-------HVTYVNKAGEEVASLDVPVDRYIFFATEDAEVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKQEGALGLMKSLKQEGYALSCCSYPKSDLVLQLQEEDDVYMKQFGDDFEAGGVEWGGVFLDED 206
            MR  G S++ LS+A+  Q F+  P A   G L  A   P  A+          MAYDV+YSPN W ++  + PG GG+WPGDP+A+TH        VT  NKAGE VA +DVP DRYI+FA ED   D+P+ N +RMCRNGCCTTCA+ V EGKVK EG LGL+K L+++G+ L+CCSY  +D+ LQLQ+ED+VY+KQ+G+ FE+GGVEWGG   +ED
Sbjct:    1 MRWIGGSVVALSLASCCQGFV--PAAVPAGRLCAAAAGPNTAARQKHPRHTCRMAYDVRYSPNSWPNQ-PLEPGVGGIWPGDPNAQTHKAMRLPLQVTIKNKAGEVVAQMDVPDDRYIYFAFEDEGHDLPLQNGRRMCRNGCCTTCAMHVQEGKVKMEGGLGLLKDLRRDGWTLTCCSYATTDVTLQLQDEDEVYLKQWGETFESGGVEWGGFLPEED 215

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BLAST of mRNA_L-elsbetiae_contig657.15272.1 vs. uniprot
Match: A0A4D9CSH6_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSH6_9STRA)

HSP 1 Score: 209 bits (533), Expect = 2.200e-65
Identity = 101/173 (58.38%), Postives = 132/173 (76.30%), Query Frame = 0

Query:   38 SPARASAAPP---LMAYDVKYSPNRWRDEGD-IVPGFGGVWPGDPDAETHHVTYVNKAGEEVASLDVPVDRYIFFATEDAEVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKQEGALGLMKSLKQEGYALSCCSYPKSDLVLQLQEEDDVYMKQFGDDFEAGGVEWGGVFLDED 206
            SPA   A+PP    +   ++ SPNRW+  G  + PG GG+WPG PDA+ + VT V+   +   ++DVP DRYIFFA ED+ VD+P+VN KRMCRNGCCTTCAVK+ EGKVK E ALGL++ +K +GYALSCCS P+SD+V +LQ+ED+VY++Q+G+ FE+GGVEWGG FL ED
Sbjct:   45 SPAALHASPPKRLTVTEQLQLSPNRWKRNGQPLEPGVGGIWPGKPDAKKYKVTVVDPRTKTNYTMDVPEDRYIFFAFEDSGVDLPMVNGKRMCRNGCCTTCAVKMKEGKVKMEAALGLLRDMKNKGYALSCCSLPRSDIVCELQDEDEVYVRQWGETFESGGVEWGG-FLPED 216

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BLAST of mRNA_L-elsbetiae_contig657.15272.1 vs. uniprot
Match: A0A7S2V5A4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5A4_9STRA)

HSP 1 Score: 205 bits (521), Expect = 4.890e-63
Identity = 98/162 (60.49%), Postives = 124/162 (76.54%), Query Frame = 0

Query:   46 PPLMAYDVKYSPNRWRDEGDIVPGFGGVWPGDPDAETHHVTYVN-KAGEEVASLDVPVDRYIFFATEDAEVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKQEGALGLMKSLKQEGYALSCCSYPKSDLVLQLQEEDDVYMKQFGDDFEAGGVEWGGVFLDED 206
            P   AYD + SPN+W     I PGFGG WPGDP+A T +V   N   GEEV  +DVP DRYI+FA EDA +++P++NK+R CRNGCCTTCAVK  EGK+K +  LGL+K +K++GY L CCSYP+SDLV+++Q+ED+VY KQ+GD FE+GGVEWGG FL ED
Sbjct:   96 PIKSAYDWRTSPNKWGRGIPIEPGFGGPWPGDPNAPTFNVKVRNVDTGEEV-EMDVPADRYIYFAFEDAGIELPLINKERACRNGCCTTCAVKTKEGKMKMDPQLGLLKEMKKQGYGLLCCSYPRSDLVVEVQKEDEVYRKQWGDTFESGGVEWGG-FLPED 255

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BLAST of mRNA_L-elsbetiae_contig657.15272.1 vs. uniprot
Match: A0A7S3YL42_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YL42_HETAK)

HSP 1 Score: 191 bits (486), Expect = 3.180e-58
Identity = 99/172 (57.56%), Postives = 126/172 (73.26%), Query Frame = 0

Query:   41 RASAAPPLMA-YDVKYSPNRWR-DEGDIVPGFGGVWPGDPDAETHHVTYVN-KAGEEVASLDVPVDRYIFFATEDAEVDVPIVNKKR---MCRNGCCTTCAVKVLEGKVKQEGALGLMKSLKQEGYALSCCSYPKSDLVLQLQEEDDVYMKQFGDDFEAGGVEWGGVFLDED 206
            R S + PL A YD + SPN+W   +    PGFGG WPGDP+A    VT  N   G EV  + VP+DRYIFF  E+ ++ VPI++ +R   MCRNGCCTTCAVKV+EGKVKQ+  +GLMK L++EGYAL CC+YP+SDLVL++  ED+ Y+KQ+G+ FE+GGVEWGG FL ED
Sbjct:   50 RDSDSGPLFAKYDWRRSPNKWTVTDKPAEPGFGGPWPGDPNAPKFKVTVKNVDEGTEVTHM-VPIDRYIFFQFEEDDIPVPIISGQRGERMCRNGCCTTCAVKVVEGKVKQDAQIGLMKELRKEGYALMCCAYPRSDLVLEVTAEDECYIKQWGESFESGGVEWGG-FLPED 219

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BLAST of mRNA_L-elsbetiae_contig657.15272.1 vs. uniprot
Match: W7TUL4_9STRA (Ferredoxin (2fe-2s) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUL4_9STRA)

HSP 1 Score: 181 bits (458), Expect = 5.150e-54
Identity = 86/150 (57.33%), Postives = 112/150 (74.67%), Query Frame = 0

Query:   38 SPARASAAPP---LMAYDVKYSPNRWRDEGD-IVPGFGGVWPGDPDAETHHVTYVNKAGEEVASLDVPVDRYIFFATEDAEVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKQEGALGLMKSLKQEGYALSCCSYPKSDLVLQLQEEDDVY 183
            SPA   A+PP    +   ++ SPNRW+  G  + PG GG+WPG PDA+ + VT V+   +   ++DVP DRYIFFA ED+ VD+P+VN KRMCRNGCCTTCAVK+ EGKVK E ALGL++ +K +GYALSCCS P+SD+V +LQ+ED+VY
Sbjct:   45 SPAALHASPPKRLTVTEQLQLSPNRWKRNGQPLEPGVGGIWPGKPDAKKYKVTVVDPRTKTNYTMDVPEDRYIFFAFEDSGVDLPMVNGKRMCRNGCCTTCAVKMKEGKVKMEAALGLLRDMKNKGYALSCCSLPRSDIVCELQDEDEVY 194

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BLAST of mRNA_L-elsbetiae_contig657.15272.1 vs. uniprot
Match: A0A482T133_9ARCH (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T133_9ARCH)

HSP 1 Score: 176 bits (445), Expect = 2.830e-52
Identity = 85/161 (52.80%), Postives = 110/161 (68.32%), Query Frame = 0

Query:   50 AYDVKYSPNR---WRDEGDIVPGFGGVWPGDPDAETHHVTYVNK-AGEEVASLDVPVDRYIFFATEDAEVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKQEGALGLMKSLKQEGYALSCCSYPKSDLVLQLQEEDDVYMKQFGDDFEAGGVEWGGVFLDED 206
            A D + +P R   W       PG GG+WPGDP A+ + VT  +K  GEE   + VP DRYI+F  E+  V++PI NK RMCR GCCT C VKV EGKVK +  LGL+K  + +GYALSCC+YPKSD+V +LQ+ED++Y+KQ+ + FE GGV WGGV  + D
Sbjct:   42 AVDEEGNPIRSGAWAKRRGFKPGVGGIWPGDPSAKKYQVTVKSKKTGEEFVQM-VPEDRYIYFYFEEQGVELPIHNKARMCRQGCCTICTVKVSEGKVKMDAPLGLLKEFRNDGYALSCCAYPKSDVVCELQDEDEMYIKQWAEGFEGGGVIWGGVLPEHD 201

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BLAST of mRNA_L-elsbetiae_contig657.15272.1 vs. uniprot
Match: A0A0G4HZN2_9ALVE (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HZN2_9ALVE)

HSP 1 Score: 159 bits (403), Expect = 2.670e-45
Identity = 74/149 (49.66%), Postives = 107/149 (71.81%), Query Frame = 0

Query:   51 YDVKYSPNRWRDEGDIVPGFGGVWPGDPDAETHHVTYVNKAGEEVASLDVPVDRYIFFATEDAEVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKQEGALGLMKSLKQEGYALSCCSYPKSDLVLQLQEEDDVYMKQFGDDFEAGGVEWG 199
            +D+  SP RW+ +  +VP  GG +PGDPDA+ ++VT ++    E  SLDV  DRYIFFA E+A + +PI N K+MCRNGCCTTC V++ EG V+ +  +GL+K + + GY LSC S P+SD+V + Q+ED+VY+KQ+ + FE G V++G
Sbjct:   98 FDLNKSPMRWQGQ-TLVPPKGGAFPGDPDAKKYNVTLIDSKTGESYSLDVAEDRYIFFAFEEAGIKLPIRNIKKMCRNGCCTTCTVRMREGDVEMDPQIGLVKEMTKNGYRLSCVSMPRSDVVAEFQDEDEVYVKQWAESFEKGKVDFG 245

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BLAST of mRNA_L-elsbetiae_contig657.15272.1 vs. uniprot
Match: A0A0G4ELQ0_VITBC (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ELQ0_VITBC)

HSP 1 Score: 159 bits (403), Expect = 6.550e-45
Identity = 74/142 (52.11%), Postives = 102/142 (71.83%), Query Frame = 0

Query:   52 DVKYSPNRWRDEGDIVPGFGGVWPGDPDAETHHVTYVNKAGEEVASLDVPVDRYIFFATEDAEVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKQEGALGLMKSLKQEGYALSCCSYPKSDLVLQLQEEDDVYMKQFGDDFEA 193
            D   +P +W     I P  GG WPGDP+A+T+ VT ++    E  + DVP DRYIFF+ E++    PI N K+MCRNGCCTTCAV+V EG+VK +  +GL + +++ GYAL+C SYP+SD+VL+LQ+ED+VY KQFGD F++
Sbjct:  129 DADDTPMKWEMGDRIKPYKGGPWPGDPNAKTYKVTIIDPVSGERHTQDVPEDRYIFFSFEESRNLPPIKNIKKMCRNGCCTTCAVRVREGEVKMDPQIGLTREMERAGYALTCVSYPRSDVVLELQDEDEVYKKQFGDTFDS 270

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BLAST of mRNA_L-elsbetiae_contig657.15272.1 vs. uniprot
Match: A0A7S1ER34_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ER34_9RHOD)

HSP 1 Score: 153 bits (387), Expect = 6.230e-44
Identity = 75/135 (55.56%), Postives = 99/135 (73.33%), Query Frame = 0

Query:   72 GVWPGDPDAETHHVTYVNKAGEEVASLDVPVDRYIFFATEDAEVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKQEGALGLMKSLKQEGYALSCCSYPKSDLVLQLQEEDDVYMKQFGDDFEAGGVEWGGVFLDED 206
            G  PGD +A+ + VT  + A     S++VPVDRYI+ + E+   D+P       CR+GCCTTCAV++ +G V QE ALGLMK+L+++GYAL C SYP+SDLV  LQ+ D+VY+KQFG+ FE+GG EWGGVFLDED
Sbjct:   40 GNLPGDVNAKKYKVTIKDPAKNVTHSVEVPVDRYIWHSMEEQGYDIPA-----SCRHGCCTTCAVRIEQGSVDQEEALGLMKALREQGYALLCVSYPESDLVATLQDADEVYVKQFGNSFESGGKEWGGVFLDED 169

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig657.15272.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig657.15272.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L1Z1_9PHAE	5.260e-113	78.37	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A835Z8Q8_9STRA	4.720e-69	52.75	Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 Re...	[more]
A0A4D9CSH6_9STRA	2.200e-65	58.38	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A7S2V5A4_9STRA	4.890e-63	60.49	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S3YL42_HETAK	3.180e-58	57.56	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
W7TUL4_9STRA	5.150e-54	57.33	Ferredoxin (2fe-2s) n=1 Tax=Nannochloropsis gadita...	[more]
A0A482T133_9ARCH	2.830e-52	52.80	2Fe-2S iron-sulfur cluster binding domain-containi...	[more]
A0A0G4HZN2_9ALVE	2.670e-45	49.66	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A0G4ELQ0_VITBC	6.550e-45	52.11	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A7S1ER34_9RHOD	6.230e-44	55.56	Hypothetical protein n=1 Tax=Timspurckia oligopyre...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 81..190 e-value: 6.4E-21 score: 76.0
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 121..169 e-value: 2.9E-9 score: 36.8
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 83..180 score: 9.317
None	No IPR available	PANTHER	PTHR43112:SF10	FERREDOXIN C 2, CHLOROPLASTIC	coord: 78..197
None	No IPR available	PANTHER	PTHR43112	FAMILY NOT NAMED	coord: 78..197
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..33
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 5..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..4
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 34..206
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..33
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..19 score: 0.544
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 74..184

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig657	contig	L-elsbetiae_contig657:6609..10000 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig657.15272.1	mRNA_L-elsbetiae_contig657.15272.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig657 6343..10007 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig657.15272.1 ID=prot_L-elsbetiae_contig657.15272.1|Name=mRNA_L-elsbetiae_contig657.15272.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=207bp
MRVRGSSLLCLSVAAHSQAFLIAPPASSRGSLGDACRSPARASAAPPLMA
YDVKYSPNRWRDEGDIVPGFGGVWPGDPDAETHHVTYVNKAGEEVASLDV
PVDRYIFFATEDAEVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKQEGALG
LMKSLKQEGYALSCCSYPKSDLVLQLQEEDDVYMKQFGDDFEAGGVEWGG
VFLDED*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012675	Beta-grasp_dom_sf
IPR001041	2Fe-2S_ferredoxin-type
IPR036010	2Fe-2S_ferredoxin-like_sf