prot_L-elsbetiae_contig6562.15263.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6562.15263.1
Unique Nameprot_L-elsbetiae_contig6562.15263.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length456
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig6562.15263.1 vs. uniprot
Match: D8LTU0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTU0_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 2.400e-11
Identity = 40/48 (83.33%), Postives = 44/48 (91.67%), Query Frame = 0 
Query:  191 MQVVP-HYLSLMGSRRTSAEDFLSLLQDSEELQAREVPAMPEEMRDDN 237
            MQVVP HYLSLMGSRRTSAEDFLSLLQDSEELQAREVP+M +E  +D+
Sbjct:   18 MQVVPQHYLSLMGSRRTSAEDFLSLLQDSEELQAREVPSMQDEEPEDS 65
[Close]
BLAST of mRNA_L-elsbetiae_contig6562.15263.1 vs. uniprot
Match: A0A6H5K231_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K231_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 2.320e-8
Identity = 66/195 (33.85%), Postives = 76/195 (38.97%), Query Frame = 0 
Query:   44 AGNAAFGFDQDGGPVPRVQSLNSLPLNASMSGSLSVQDLAMLLGMNGGXXXXXXXXXXXXXXXSAQLPGNIPTPADLGGIMGMGGMRSTPSSAFLRSSFGQLTDLQVESMHQLQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAMQVVP-HYLSLMGSRRTSAEDFLSLLQDSEELQAREVPAMPEEMRDDN 237
            AGNAAFGFDQDGGPVPR Q+LNSLP N SM+GSLSVQ                                               G  S+ +  F                                                     + VVP H+LSLMG+RRTSAEDFLSLLQ      AREVP+M +E  DD+
Sbjct:  412 AGNAAFGFDQDGGPVPRAQTLNSLPSN-SMTGSLSVQ-----------------------------------------------GRISSRAMVF----------------------------------------------------RLPVVPQHFLSLMGARRTSAEDFLSLLQ------AREVPSMQDEESDDS 500
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6562.15263.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTU0_ECTSI2.400e-1183.33Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K231_9PHAE2.320e-833.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001103Androgen receptorPFAMPF02166Androgen_recepcoord: 17..310
e-value: 3.4E-7
score: 29.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6562contigL-elsbetiae_contig6562:589..5305 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6562.15263.1mRNA_L-elsbetiae_contig6562.15263.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6562 382..5843 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6562.15263.1 ID=prot_L-elsbetiae_contig6562.15263.1|Name=mRNA_L-elsbetiae_contig6562.15263.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=456bp
MLGPAGPPPGHSGHNQHLFQQQQQHHHHQQQQQQQQQQQQLAAAGNAAFG
FDQDGGPVPRVQSLNSLPLNASMSGSLSVQDLAMLLGMNGGGGGGGADSA
GGSGSGSAQLPGNIPTPADLGGIMGMGGMRSTPSSAFLRSSFGQLTDLQV
ESMHQLQHQHQHVAAAALAGGTAASGAGGGGGAGANGSGAMQVVPHYLSL
MGSRRTSAEDFLSLLQDSEELQAREVPAMPEEMRDDNQSPPPPPPTSHAL
LPPPARVFSGPQNSSSARSSSLSAPATSTPHAPQGVSAAAAAAAATTGGG
GGGSSISGGSRSVFAGSGQSPLLSVASKGTGGGSDDAGRTSRSGPTAGTT
GDAASADGGAGGSLAADGEGKAAGAAAAAEEDNSAVDMYLIGEGAEGEEE
EEEEGDDNGDAEEEGASVSPNGVAHDRAEGRAAESGTAAAVAAEQLDAKR
QRVEA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001103Andrgn_rcpt