prot_L-elsbetiae_contig644.15114.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig644.15114.1
Unique Nameprot_L-elsbetiae_contig644.15114.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length156
Homology
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BLAST of mRNA_L-elsbetiae_contig644.15114.1 vs. uniprot
Match: A0A6H5KS19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS19_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.430e-7
Identity = 44/74 (59.46%), Postives = 46/74 (62.16%), Query Frame = 0 
Query:    1 MSDD-GGDQEASSQ--GRWLGAVRSWVGSAPPQGAEAPAASPSP------ALSADEIRRRRLERMGGSNTQQPE 65
            MSD  GGD  A  Q  GRWLGAVRSW+  A     EAPA           ALSADEIRRRRLERMGGSN  QP+
Sbjct:    1 MSDPTGGDNAAEDQQQGRWLGAVRSWIRGAE---GEAPAXXXXXXXXXXXALSADEIRRRRLERMGGSNMDQPQ 71
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig644.15114.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KS19_9PHAE1.430e-759.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig644contigL-elsbetiae_contig644:8172..9646 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig644.15114.1mRNA_L-elsbetiae_contig644.15114.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig644 8006..9646 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig644.15114.1 ID=prot_L-elsbetiae_contig644.15114.1|Name=mRNA_L-elsbetiae_contig644.15114.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=156bp
MSDDGGDQEASSQGRWLGAVRSWVGSAPPQGAEAPAASPSPALSADEIRR
RRLERMGGSNTQQPERQQQKQSPSPSPPRAPDSDSTPSSGPVAMDVEPPA
PATAATAAKPAAPLAAAAAVAAAAPTAAPAAAGAAERGSLKAGGGGGGGG
GGGGVA
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