prot_L-elsbetiae_contig6378.15042.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6378.15042.1
Unique Nameprot_L-elsbetiae_contig6378.15042.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length695
Homology
BLAST of mRNA_L-elsbetiae_contig6378.15042.1 vs. uniprot
Match: D7FPY5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPY5_ECTSI)

HSP 1 Score: 998 bits (2580), Expect = 0.000e+0
Identity = 529/691 (76.56%), Postives = 574/691 (83.07%), Query Frame = 0
Query:   17 MRRAR--SATPLWACPFCSSWKSLVLTCLALSQVVTIYLLLHIAS---KREQRQEAATLLDADLLDRDPAAAPRPPSTRKCLRRVLSVTESSS-----VSTGTKKTCVPQTVSPGQCSDEARAVQRPGQDKRDTCAFDLDETEVVFGVWHSLATEDRLQPLLETWGRRVQVVLLASSVGVRDSKLFREGAPGSRPHLLDTGVEQDDYFSTLGKAFVGLRLMLEAYPAKKWFVVLGDDNYVLLDNYVNVLSAFDPEQPWALSRMVHRNKFGCKVAGGASVITSRAMTQQLSPHLEPWYEGIVERSGGDVNKAAEEDKFHDIAFQKLVEHVGHSWVHLDELPHEPPGYYFDPRLGTPRGGAGGGGMA-----IPERSALFHYVPGKYMHYLDFVSSRACTCGDLTAAETTAALSEVAVGVYSPTRRLSKLDEKRIESAWGKQGAGLAPRQRRMLAASGREHAGVRGDLARLRELSEAFPDAGWLLLLPVEHYLVAANLAARVRELDADKSPGRRGLMVYGPPGDASAXXXXXXXXX-QSDEFPEDEENAENVPGEGALLVGKDLVETILFFGESLAGGVFPAQRQPRDRYLVEWARTLSPVTVVQDEGFVRRLPGPSRAARGTEEEEKEEGEKGYVVGCPATFPMEPDLADLKPEFTMSEGDAVMSVTAFLLRASAEKKTCATELKTTEVDVY 691
            MRR R  SA+P W  PF SSWKSLVLTCLALSQV+TIYLLL IA    + EQ Q        D    D +A P PPSTRK LRRVLSV  SS+           + CVP+T+SPG CSDE R V+RP Q+KR+TC F+LD+TEVVFGVWHSLATE RLQPLLETWGRR QVVLLASSVGVR+SKLFREG PGSRPHLLDTG+EQDDYFSTLGKAFVGLRLML+AYP KKWFVVLGDDNYVLLDNY+N LSAFDPE+P ALSRMVHRNKFGCKVAGGASVITSRAMT+QLSPHLEPWY+GIVERSGGDVNKA EEDKFHDIAFQKLVEH+GHSWVHLDELPHEPPGYYFDPRLG  R   G          IPERSALFHYVPGKYMHYLDFVS RACTCGD+T A+T  ALSEVA+GVYSPTRRLSKLDEKRIE+AWG+ G GL  RQRRMLAASGREHAGVRGDLARLRELSEAFPDAGWLLLLPVEHYLVAANLAAR+R L+ADKSPGRRGL+VYGPPG+A  XXXXXXX     D F E+EENAE++PGEGALL+GKDLVET L+FGESLAGGVFPA+RQP DR+LVEWARTLS VTVVQD GFVRRLP  + A               +VVGCPATFPMEPDLADLKPEFTMSEGDAVM+VT FLLRASAE+ +C  +L+  E+DVY
Sbjct:    1 MRRHRLASASPPWMSPFFSSWKSLVLTCLALSQVITIYLLLRIAGNGGRDEQPQHPVYTEGVDPDYHDRSAGPIPPSTRKSLRRVLSVAGSSASXXXXXXXXXPRACVPRTISPGVCSDEERGVRRPEQNKRETCVFELDKTEVVFGVWHSLATEGRLQPLLETWGRRAQVVLLASSVGVRESKLFREGVPGSRPHLLDTGIEQDDYFSTLGKAFVGLRLMLDAYPTKKWFVVLGDDNYVLLDNYINALSAFDPEEPLALSRMVHRNKFGCKVAGGASVITSRAMTRQLSPHLEPWYQGIVERSGGDVNKATEEDKFHDIAFQKLVEHLGHSWVHLDELPHEPPGYYFDPRLGVSRAVGGXXXXXXXXAMIPERSALFHYVPGKYMHYLDFVSWRACTCGDMTPAQTAEALSEVAIGVYSPTRRLSKLDEKRIEAAWGRPGGGL--RQRRMLAASGREHAGVRGDLARLRELSEAFPDAGWLLLLPVEHYLVAANLAARIRTLEADKSPGRRGLLVYGPPGNAXXXXXXXXXRQILGDNFTEEEENAEDLPGEGALLIGKDLVETTLYFGESLAGGVFPARRQPGDRFLVEWARTLSAVTVVQDSGFVRRLPA-APAGXXXXXXXXXXXXXXHVVGCPATFPMEPDLADLKPEFTMSEGDAVMAVTGFLLRASAERTSCTPKLEMAEIDVY 688          
BLAST of mRNA_L-elsbetiae_contig6378.15042.1 vs. uniprot
Match: A0A836CKM8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKM8_9STRA)

HSP 1 Score: 372 bits (956), Expect = 1.670e-117
Identity = 239/606 (39.44%), Postives = 313/606 (51.65%), Query Frame = 0
Query:  113 CVPQTVSPGQCSDEARAVQRPGQDKRDTCAFDLDETEVVFGVWHSLATEDRLQPLLETWGRRVQVVLLASSVGVRDSKLFR-EGAPGSRPHLLDTGVEQDDYFSTLGKAFVGLRLMLEAYPAKKWFVVLGDDNYVLLDNYVNVLSAFDPEQPWALSRMVHRNKFGCKVAGGASVITSRAMTQQLSPHLEPWYEGIVERSGGDVNKAAEEDKFHDIAFQKLVEHVGHSWVHLDELPHEPPGYYFDPRLGTPRGGAGGGGMAIPERSALFHYVPGKYMHYLDFVSSRACTCGDLTAAETTAALSEVAVGVYSPTRRLSKLDEKRIESAWGK----------QGAGLAPRQRRMLAASGRE-------------------HAGVRGDLARLRELSEAFPDAGWLLLLPVEHYLVAANLAARVRELDADKSPGRRGLMVYGPPG-DASAXXXXXXXXXQSDEFPEDEENAENVPGEGALLVGKDLVETILFFGESLAGGVFPAQRQPRDRYLVEWARTLSPVTVVQDEGFVRRLPGPSRAARGTEEEEKEEGEKGYVVGCPATFPMEPDLADLKPEFTMSEGDAVMSVTAFLLRASAEKKTCATELKTTE 687
            C P  +S G C D AR         RD CA  L  ++VVFGVWHSLATE RL P+L+TW +  Q+VLLAS  G   ++LF    APGS P LLDTGV +DDYFSTLGKAF+GL +M   +P  KWFVVLGDDNYVLL NYV  LSAFDP+QPWAL+RMV+RN F CK                          GI +RSGGDV KAA+EDKFHDIAFQ++VE +G+S+ H++E  HEPPGYYF PR G   GG     +A+P R A+ HYVPG YM +L  +++  CTC      +    L  VAVGVYS  RRL+  D +R+ + WGK                 +QR   + SGR                    H G R  L+RL +L    P   WLLL+ ++ Y++AANLA R+  L A     R  + + G  G DA+A                           G +L+ + L E +L   E            P    L++ A+++    +V D  F          ARG+++     G        P    + PD++DL+PEF  +E    +SV  +L+RA A +  C+  L  T+
Sbjct:   25 CAPSRISFGTC-DNARKSIVAAASPRDACAHALAPSDVVFGVWHSLATEARLVPMLQTWAQSAQIVLLASRAGTSGTRLFHGSDAPGSNPLLLDTGVLEDDYFSTLGKAFIGLAMMHARFPRAKWFVVLGDDNYVLLANYVAALSAFDPQQPWALTRMVYRNAFQCK--------------------------GIYQRSGGDVKKAAQEDKFHDIAFQRMVEGLGYSFTHVNEFLHEPPGYYFSPRTGQAHGG-----VALPARPAVLHYVPGSYMQHLHALTAEICTCDSSAHMDL---LKTVAVGVYSDYRRLTAEDRQRVNNTWGKAFDVELVECESEQDSDAQQRGAASLSGRRLQDLFSHQKGLGSNAQQIPHVGGRCHLSRLDQLLTHHPGKQWLLLVDIDSYVIAANLAVRLAALGA-----REPICLVGVTGGDAAATLDYRA---------------------GDVLLSRALAERVLEEREQSDAEQAADPSAP----LLQLAQSIDAQALVVDATF----------ARGSDDSGGSGGAAAAGCTAPVVVQLRPDVSDLRPEFEKTEEGCKLSVAHYLVRAVAARSGCSARLDMTK 555          
BLAST of mRNA_L-elsbetiae_contig6378.15042.1 vs. uniprot
Match: A0A7S2D4F5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D4F5_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 5.830e-12
Identity = 40/111 (36.04%), Postives = 59/111 (53.15%), Query Frame = 0
Query:  140 TCAFDLDETEVVFGVWHSLATEDRLQPLLETWGRRVQVVLLASSVGVRDSKLFREGAPGSRPH----LLDTGVEQDDYFSTLGKAFVGLRLMLEAYPAKKWFVVLGDDNYV 246
            +C + L+ ++V+ GV  S  T DR  P++++W  R+  V L                 G   H    +L TGV++DDY STLGK F+GL  M   YP KKW+ +L DD ++
Sbjct:   20 SCTYPLNGSDVLIGVTVSEGTIDRAGPIIQSWYERISTVFL-----------------GHHAHKGMDILITGVDRDDYRSTLGKGFLGLYEMHRQYPDKKWYALLDDDCFL 113          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6378.15042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FPY5_ECTSI0.000e+076.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CKM8_9STRA1.670e-11739.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2D4F5_9STRA5.830e-1236.04Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003378Fringe-likePFAMPF02434Fringecoord: 161..270
e-value: 4.5E-5
score: 23.0
NoneNo IPR availableGENE3D3.90.550.50coord: 139..303
e-value: 7.0E-9
score: 37.0
NoneNo IPR availablePANTHERPTHR23033BETA1,3-GALACTOSYLTRANSFERASEcoord: 32..412
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..55
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..694

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6378contigL-elsbetiae_contig6378:4817..7997 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6378.15042.1mRNA_L-elsbetiae_contig6378.15042.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6378 4817..7997 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6378.15042.1 ID=prot_L-elsbetiae_contig6378.15042.1|Name=mRNA_L-elsbetiae_contig6378.15042.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=695bp
KRTNLIHLPCQYRVVKMRRARSATPLWACPFCSSWKSLVLTCLALSQVVT
IYLLLHIASKREQRQEAATLLDADLLDRDPAAAPRPPSTRKCLRRVLSVT
ESSSVSTGTKKTCVPQTVSPGQCSDEARAVQRPGQDKRDTCAFDLDETEV
VFGVWHSLATEDRLQPLLETWGRRVQVVLLASSVGVRDSKLFREGAPGSR
PHLLDTGVEQDDYFSTLGKAFVGLRLMLEAYPAKKWFVVLGDDNYVLLDN
YVNVLSAFDPEQPWALSRMVHRNKFGCKVAGGASVITSRAMTQQLSPHLE
PWYEGIVERSGGDVNKAAEEDKFHDIAFQKLVEHVGHSWVHLDELPHEPP
GYYFDPRLGTPRGGAGGGGMAIPERSALFHYVPGKYMHYLDFVSSRACTC
GDLTAAETTAALSEVAVGVYSPTRRLSKLDEKRIESAWGKQGAGLAPRQR
RMLAASGREHAGVRGDLARLRELSEAFPDAGWLLLLPVEHYLVAANLAAR
VRELDADKSPGRRGLMVYGPPGDASAAAAAAERRRQSDEFPEDEENAENV
PGEGALLVGKDLVETILFFGESLAGGVFPAQRQPRDRYLVEWARTLSPVT
VVQDEGFVRRLPGPSRAARGTEEEEKEEGEKGYVVGCPATFPMEPDLADL
KPEFTMSEGDAVMSVTAFLLRASAEKKTCATELKTTEVDVYEFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003378Fringe-like