prot_L-elsbetiae_contig6329.14975.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6329.14975.1
Unique Nameprot_L-elsbetiae_contig6329.14975.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length642
Homology
BLAST of mRNA_L-elsbetiae_contig6329.14975.1 vs. uniprot
Match: D7FXN8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXN8_ECTSI)

HSP 1 Score: 590 bits (1521), Expect = 8.190e-193
Identity = 341/544 (62.68%), Postives = 397/544 (72.98%), Query Frame = 0
Query:   13 PYGAPSLLRLAWKRPPQALAEAAAPATAGSSPGDDIRVDISPADFVSLTFPVYKAMFAYMPNMTGLKTGRAELVRAMTLPNHYTSASFMRLLALAERQLRLSPKHFEAVLGAMMQKSGLMLASNWMQEQMALFHALDLTPIRPSPGEPGAPLDTRRVVLLVPHSGIKLLRAFSLPEIFLSLSG--GTFDNHFVSIHTTFVRVRRGRSGXXXXXXXXXSDEGDGVDSGWRSLNGHLCVRDTGEDDPAGELMVSALVPSFIFALVPLSEIEVRLRPRDSMEMMQAPAEIMRKMGGQLLKTFYRASLTDENRTAILIPGWESLDGKSRSGSSSTXXXXXXXSTVALACPDSAVTDRRRSCPASSAPPQGRASSAPVQALHRTVHGASIVDQSIELIGSREAGRAGGAAAARLVFRVKFAMANAEAREALAATAAPVLRETRDPCCVRVALGGGGGADLLTLVALLPFPANRNALDMKFSKRQGFVVFTVPPLQGSLHIPSVLQRVPGGEGRVVPSNLWWPPCAPLSSLPRLDFNAEWAHDKASGQRS 554
            P GAPSLLRLAW+RP QA A+A    T GSSP     +DISP+DFVSL  PVYKAMFA +  + G + GR E +RA+T P HYTSASF+RLLALA RQLRL  +HFEA L AM+  SGL++ASN MQEQMALFHA+DL PIRPSP EPGAP+DTRRVVLLVPHSG+ LLRAFSLPEI+LSL+G  GTFDNHF S+H  FVRVRRGRSG         S +G G D+GWRSL+ HLCVRDT  DDPA ELM+SALVPSF F+L PLSE EVRLRPRDS+EMM+AP ++M KMGG L K F++A+LTD++RTAIL PG +   G+S  GSS           V LACP +AVTDR +  P+S+A  +   +      LHR V G S VD+S+ELI +  AG+ G A   R V+R+KF M    AREAL  +A P + E+ DPCCVRV LG G    LLTLVA LPFP NRNA+DMKFS+RQGFV+FTVPPL GSLHIPS L       G  VPSN+WWPPCAPLSSLPRLDFNAEW+ DK  G  S
Sbjct:  578 PGGAPSLLRLAWRRPAQAFAQATVHTT-GSSP---TNIDISPSDFVSLVLPVYKAMFANV-GLLGSR-GREESIRALTTPMHYTSASFIRLLALAGRQLRLDTRHFEAALKAMIVGSGLIMASNMMQEQMALFHAMDLIPIRPSPNEPGAPVDTRRVVLLVPHSGLMLLRAFSLPEIYLSLAGTRGTFDNHFSSLHMGFVRVRRGRSGGG-------SRDG-GNDNGWRSLSDHLCVRDTQSDDPAAELMISALVPSFAFSLAPLSETEVRLRPRDSVEMMRAPKDVMNKMGGMLWKCFFKANLTDKDRTAILTPGGDDPFGESGGGSSIG---------VLLACPKTAVTDRLQEAPSSTASTKSEPA-----LLHRIVDGKSTVDRSVELICNGPAGKTGDA---RFVYRIKFIMITDLAREALT-SATPAVAESLDPCCVRVTLGKG----LLTLVAHLPFPVNRNAVDMKFSRRQGFVLFTVPPLGGSLHIPSTLTACVADGGGTVPSNIWWPPCAPLSSLPRLDFNAEWSFDKVMGGMS 1085          
BLAST of mRNA_L-elsbetiae_contig6329.14975.1 vs. uniprot
Match: A0A6H5JFV6_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFV6_9PHAE)

HSP 1 Score: 380 bits (977), Expect = 2.520e-115
Identity = 243/532 (45.68%), Postives = 320/532 (60.15%), Query Frame = 0
Query:   44 PGDDIRVDISPADFVSLTFPVYKAMFAYMPNMTGLKTGRAEL-----VRAMTLPNHYTSASFMRLLALAERQLRLSPKHFEAVLGAMMQKSGLMLASNWMQEQMALFHALDLTPIRPSPGEP-GAPLDTRRVVLLVPHSGIKLLRAFSLPEIFLSLSGGT--FDNHFVSIHTTFVRVRRGRSGXXXXXXXXXSDEGDGVDSGWRSLNGHLCVRDTGEDDPAGELMVSALVPSFIFALVPLSEIEVRLRPRDSMEMMQAPAEIMRKMGGQLLKTFYRASLTDENRTAILIPGWESLDGKSRSGSSSTXXXXXXXSTVALACPDS-AVTDRRRSCPASSAPPQGRASSAPVQALHRTVHGASIVDQSIELIGSREAGRAGGAAAARLVFRVKFAMANAEAREALAATAAPVLRETRDPCCVRVALGGGGGADLLTLVALLPFPANRNALDMKFSKRQGFVVFTVPPLQGSLHIPSVLQR--VPGGEGRVVPSNLWWPPCAPLSSLPRLDFNAEWAHDKASGQRSLALPPICCRY 564
            P +++ VDISP DFV+LT PVYK MF +MP  + L + +  L     +R+ TL  +YTS SF RLL+LA R+LRL   HF++VLGA++  SGL+LA N MQEQMA+FHAL L PIR   G     P D RRVVLLVP +G+ LLR F+ PE++L+L+G    F+N FVS+HT FVRVRRG               G     GW SLN HL VRDT E DP  ELMVSA+VPSF   + P +  E++LRPRD +E+ QAP  ++R++GG   K F++A+L + ++TA+LIPG            ++        S    +CPD  A  D+  S P+   PP GR     V   HR +HG + +DQ++EL+  ++AG   G A  RLV+RV   MAN EAR+ LAA  APVL    DP  VRVALG G G         LPFP  +  + M++SKRQG+V++TVPP++  L+ P       + G    V+PS  +W P  PLSSLPRLDF AEWAH K   +  LA+    C +
Sbjct:  394 PSNNVLVDISPRDFVNLTLPVYKEMFGHMPKTSMLASRKFHLPANEALRSATLLKYYTSVSFGRLLSLAGRRLRLRVAHFDSVLGAIIDNSGLILAPNLMQEQMAVFHALGLAPIRQPIGAMFPIPRDLRRVVLLVPKAGLSLLREFTQPELYLALAGTLEPFENFFVSVHTVFVRVRRG-----------GKCRGQEDLDGWSSLNSHLMVRDTREQDPEAELMVSAMVPSFALMMAPPAFTELQLRPRDGIEVFQAPKSVIRRLGGYFKKHFFKATLDNADKTAVLIPG------------ATGDILHGGVSRPRFSCPDRVACPDQNSSRPS---PPMGRGLRKAVD-THRFMHGDAAIDQAVELV--QQAGSTSGDA--RLVYRVTLVMANDEARQCLAAGGAPVLETLHDPFSVRVALGEGLGH-----ATGLPFPIEQRRVQMEYSKRQGYVIYTVPPVRQPLNFPLAWTGLDIEGVGKAVLPSMPFWSPAVPLSSLPRLDFQAEWAHQK---EEILAIISTACEH 886          
BLAST of mRNA_L-elsbetiae_contig6329.14975.1 vs. uniprot
Match: D8LNQ8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNQ8_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 1.130e-114
Identity = 257/558 (46.06%), Postives = 321/558 (57.53%), Query Frame = 0
Query:   16 APSLLRLAWKRPPQALAEAAAPATAGSSPGDDIRVDISPADFVSLTFPVYKAMFAYMPNMTGLKTGRAELVRAMTLPNHYTSASFMRLLALAERQLRLSPKHFEAVLGAMMQKSGLMLASNWMQEQMALFHALDLTPIRPSP-GEPGAPLDTRRVVLLVPHSGIKLLRAFSLPEIFLSLSGGT----FDNHFVSIHTTFVRVRRGRSGXXXXXXXXXSDEGDGVDSGWRSLNGHLCVRDTGEDDPAGELMVSALVPSFIFALVPLSEIEVRLRPRDSMEMMQAPAEIMRKMGGQLLKTFYRASLTDENRTAILIPGWESLDGKSRSGSSSTXXXXXXXSTVALACPDSAVTDRRRSCPASSAPPQGRASSAPVQALHRTVHGASIVDQSIELIGSREAGRAGGAAAARLVFRVKFAMANAEAREALAAT-AAPVLRETRDPCCVRVALGGGGGADLLTLVALLPFP-ANRNALDMKFSKRQGFVVFTVPPLQGSLHIP---SVLQRVPGGEGRVVPSNLWWPPCAPLSSLPRLDFNAEWAHDKASGQRSLALPPICCR 563
            APS  RL WKRP  AL         G S   +  +DISPAD VSLT PVYK M + M    G+   R  ++   T  NHYTS SF+RLL  A R+LRLS  H+ AVL A+M  SG+MLASN  QEQMALFHALDL  +RP   G    PLDTRRVVLLVP SG+ LLR F LP ++LS++G T    FDNHF   H  +VRV RG              EG G D GWRSLN HL VRD  EDDP  ELMVSAL+P+    L   S  E++LRPR+S+E++ AP +I +++GG   K FY+A ++D +R A+L PG     GKS   + S            LACP   V        ++ +    R S++   ALHR +HG S +DQS+ELI      +AG  +   L ++V   MAN  AR  LAA   AP +  +RDPC +RV L  G     L   A LPFP A R+A+ +KFSK +G++  T P L+G L  P   +V     G   R +PS ++WPPCAPLSSLPRLDF AEW H K  G+ SL    +  R
Sbjct:  603 APSQFRLVWKRPSAAL---------GESVAAEASMDISPADLVSLTLPVYKNM-SPMAGPFGMT--REMIISMATTANHYTSVSFIRLLVGAGRRLRLSATHYRAVLHALMNNSGMMLASNLSQEQMALFHALDLARMRPCDLGSGPIPLDTRRVVLLVPKSGLSLLRHFQLPGVYLSVTGATTQQPFDNHFTCAHMAYVRVHRGGG---------LGGEGGGGD-GWRSLNKHLSVRDAREDDPEAELMVSALLPTIALVLAVPSVTELQLRPRESIEVINAPKDIKKRLGGDH-KVFYKAGISDADRVAVLTPGEA---GKSVMAAESPPP---------LACPQIGVACIPDQATSAYSAQLVRKSTSEAAALHRALHGDSAIDQSVELIN-----QAGRGSDVLLAYKVTLVMANDHARARLAAAEGAPAVELSRDPCSIRVKLEEG-----LRHTARLPFPVAKRSAMKIKFSKSKGYLCVTAPLLKGPLQAPFSLTVYSNTEGAGHRAIPSTVFWPPCAPLSSLPRLDFKAEWIHRKVMGEFSLTHAEVLMR 1115          
BLAST of mRNA_L-elsbetiae_contig6329.14975.1 vs. uniprot
Match: D8LCP4_ECTSI (MYND-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP4_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 1.660e-107
Identity = 231/496 (46.57%), Postives = 302/496 (60.89%), Query Frame = 0
Query:   68 MFAYMPNMTGLKTGRA-----ELVRAMTLPNHYTSASFMRLLALAERQLRLSPKHFEAVLGAMMQKSGLMLASNWMQEQMALFHALDLTPIRPSPGEPGAPL--DTRRVVLLVPHSGIKLLRAFSLPEIFLSLSGGT--FDNHFVSIHTTFVRVRRGRSGXXXXXXXXXSDEGDGVDSGWRSLNGHLCVRDTGEDDPAGELMVSALVPSFIFALVPLSEIEVRLRPRDSMEMMQAPAEIMRKMGGQLLKTFYRASLTDENRTAILIPGWESLDGKSRSGSSSTXXXXXXXSTVALACPDS-AVTDRRRSCPASSAPPQGRASSAPVQALHRTVHGASIVDQSIELIGSREAGRAGGAAAARLVFRVKFAMANAEAREALAATAAPVLRETRDPCCVRVALGGGGGADLLTLVALLPFPANRNALDMKFSKRQGFVVFTVPPLQGSLHIPSVLQRVP-GGEGR-VVPSNLWWPPCAPLSSLPRLDFNAEWAHDKASG 551
            MF +MP  +   T +      E++R+ T+P +YTS SF RLL+LA R+LRL   HF +VLGA++  SGL+LA N  QEQ+A+FHAL L PIR   G P  P+  D RR+VLLVP SG+ LLR F+ PE++L+L+G    F+N FVS+HT FVRVRRG               G     GWRSLN HL VRDT E  P  ELMVSA+VPSF   + P +  E++LRPRD +EM +AP +++R++GG   K F++A+L + ++TA+LIPG  +  G    G           ST   +CPD  A  DR    P+   P  GR  S  V   HR +HG + +DQ++EL+   +AG   G A  RLV+RV   MAN EARE LAA  APVL    DPC V+VALG G     L+    LPFP  R  +  ++SKRQG+V++TVPP++  L++P     +   G GR V+PS   W P  PLSSLPRLDF AEWAH+K  G
Sbjct:    1 MFGHMPKTSMTATRKFDRPANEVLRSATMPKYYTSVSFGRLLSLAGRRLRLRVAHFHSVLGAIINNSGLILAPNLQQEQIAVFHALGLVPIRQHFG-PMLPIPGDLRRLVLLVPKSGLSLLREFTQPELYLALAGTLEPFENFFVSVHTAFVRVRRGSK-----------YRGQEDLDGWRSLNSHLMVRDTREQAPEAELMVSAMVPSFALMMAPPAFTELQLRPRDGIEMYRAPKDVLRRLGGYFNKHFFKATLGNADKTAVLIPG--ATGGILHGG----------VSTRRFSCPDRVACPDRDLLRPS---PRTGRCLSKAVD-THRFMHGDAAIDQTVELV--EQAGSNSGDA--RLVYRVTLVMANDEAREGLAAGGAPVLETLHDPCSVQVALGEG-----LSHAVSLPFPIERRRVQREYSKRQGYVIYTVPPIRLPLNLPLAWIGLDIKGVGRAVLPSMPSWSPAVPLSSLPRLDFQAEWAHEKVMG 459          
BLAST of mRNA_L-elsbetiae_contig6329.14975.1 vs. uniprot
Match: D8LNQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ6_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 6.330e-19
Identity = 69/170 (40.59%), Postives = 92/170 (54.12%), Query Frame = 0
Query:  386 LHRTVHGASIVDQSIELIGSREAGRAGGAAAARLVFRVKFAMANAEAREALAATAAPVLRETRDPCCVRVALGGGGGADLLTLVALLPFPANRNALDMKFSKRQGFVVFTVPPLQGSLHIPSVLQRVPGGEGRVVPSNLWWPPCAPLSSLPRLDFNAEWAHDKASGQRSL 555
            LH +     +VD SIELI  R+     G+    LV++V   MA+  AR+ LAA  A V  +    C V V LGG  G          PFP  ++A+++K SKRQG  +FTVPP      IP  +  + G     +PS+L+W PC PL+SLPRLDF AEW H +  G  S+
Sbjct:  564 LHHSTRSDFVVDHSIELI--RDVWMIEGSG---LVYKVTLRMADDGARDVLAAGGAAVDEKAGGLCSVCVKLGGRFGH-----FTHFPFPVKKSAINLKVSKRQGHAIFTVPPSGSPAQIP--VTALAG-----LPSSLFWSPCVPLASLPRLDFQAEWTHGQVMGGMSI 716          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6329.14975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FXN8_ECTSI8.190e-19362.68MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JFV6_9PHAE2.520e-11545.68MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LNQ8_ECTSI1.130e-11446.06MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
D8LCP4_ECTSI1.660e-10746.57MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LNQ6_ECTSI6.330e-1940.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 588..609
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 610..641
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..587
NoneNo IPR availableTMHMMTMhelixcoord: 587..609

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6329contigL-elsbetiae_contig6329:605..5092 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6329.14975.1mRNA_L-elsbetiae_contig6329.14975.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6329 521..8034 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6329.14975.1 ID=prot_L-elsbetiae_contig6329.14975.1|Name=mRNA_L-elsbetiae_contig6329.14975.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=642bp
MMPETFSPSPDLPYGAPSLLRLAWKRPPQALAEAAAPATAGSSPGDDIRV
DISPADFVSLTFPVYKAMFAYMPNMTGLKTGRAELVRAMTLPNHYTSASF
MRLLALAERQLRLSPKHFEAVLGAMMQKSGLMLASNWMQEQMALFHALDL
TPIRPSPGEPGAPLDTRRVVLLVPHSGIKLLRAFSLPEIFLSLSGGTFDN
HFVSIHTTFVRVRRGRSGGGGGGSGGGSDEGDGVDSGWRSLNGHLCVRDT
GEDDPAGELMVSALVPSFIFALVPLSEIEVRLRPRDSMEMMQAPAEIMRK
MGGQLLKTFYRASLTDENRTAILIPGWESLDGKSRSGSSSTAAAPPAAST
VALACPDSAVTDRRRSCPASSAPPQGRASSAPVQALHRTVHGASIVDQSI
ELIGSREAGRAGGAAAARLVFRVKFAMANAEAREALAATAAPVLRETRDP
CCVRVALGGGGGADLLTLVALLPFPANRNALDMKFSKRQGFVVFTVPPLQ
GSLHIPSVLQRVPGGEGRVVPSNLWWPPCAPLSSLPRLDFNAEWAHDKAS
GQRSLALPPICCRYMLRKRGRFACRLTSHSPATSAAAAVSWVLATLTIRC
AFGMGLFVARVRARAMVAGDGWPLVHARREVFAGRLLRAQE*
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