prot_L-elsbetiae_contig6300.14938.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6300.14938.1
Unique Nameprot_L-elsbetiae_contig6300.14938.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length416
Homology
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BLAST of mRNA_L-elsbetiae_contig6300.14938.1 vs. uniprot
Match: A0A6H5KJM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM5_9PHAE)

HSP 1 Score: 474 bits (1219), Expect = 2.820e-163
Identity = 248/392 (63.27%), Postives = 296/392 (75.51%), Query Frame = 0 
Query:   26 QPEFREDGAGGM-TASEDKRGSHADFLKKKFGRAMNHAAAFLSLGLFLEVAASFWTLGQAIASGVFVEADCGVRALSLYHNQELPRGCQQLDDSVVWFDEARTFSTFTSCGGDRLQGPNIEQLCDCSKYDKVFGGCAWAAAASTRDAIEGLCVAVPVIQLNEEHQEEFGTTYEWVLDSSELEFQDDCRPLNPEGFGDITIALLVVSLVIGIVEAYVGYKRWKDPLRGADLVVFGSLVEAAGVLSIWGLLVFAPQGIVQAQTDDNPQVSEHQFSFLVTLLGLVPIMTVVGTLAEVVFHRSAAAHGRLPYLGVLGNALIWLAAGVTEVLVTAYLVWRLQFWKSEEDEAEADKENWPVLVGAVVGLIVLEAVALLSVWAARFFFARAKSMLLGAK 416
            QP+F  DG     T SE KR   A  LKK+  R M HAAAFLSLGLFLE+ A+FWTL QAIASGVF EADCGVRALSLYHN  LP  C+QLD SVVWFDE RT STFTSC G  L+ P I+QLCDC++YD+V  GC W +A+STRD IEGLCVAVPVI L  + QEE+GTTY+W+LDSSELE+QDDCRPL+PEGFGDITIALLVVSL + +VEAYVGYKRW++PL    LVV  S++E  G+ SIW LL F P GI++ +      VSE+Q+ FL  +L  V ++T  GTLAE+VF+ SA   GR  YLGVLGN+L WLA+ +TEV+VTAYLVWRLQ+W++ ++ A  D+E WPVLV AV+GL+VLE  ALL +W AR   ARA S LL AK
Sbjct:    7 QPDFDADGTAATGTVSEGKRNHRAACLKKQAIRGMKHAAAFLSLGLFLEIGATFWTLAQAIASGVFDEADCGVRALSLYHNDRLPSNCEQLDSSVVWFDEDRTVSTFTSCSG--LEDPPIDQLCDCARYDRVSTGCTWTSASSTRDEIEGLCVAVPVIALTSDLQEEYGTTYDWLLDSSELEYQDDCRPLSPEGFGDITIALLVVSLSLELVEAYVGYKRWRNPLSVRGLVVVASVLEGVGLFSIWCLLRFLPGGILETE------VSENQYKFLNIMLYGVLVVTFGGTLAEIVFYFSAP--GRFRYLGVLGNSLTWLASALTEVVVTAYLVWRLQWWENADETA--DEETWPVLVAAVIGLVVLEVAALLVLWIARVLIARATSALLTAK 386
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6300.14938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJM5_9PHAE2.820e-16363.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 296..320
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 332..357
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 277..295
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 321..331
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 82..221
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 222..242
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 402..416
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 243..253
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 377..401
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 254..276
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 358..376
NoneNo IPR availableTMHMMTMhelixcoord: 254..276
NoneNo IPR availableTMHMMTMhelixcoord: 298..320
NoneNo IPR availableTMHMMTMhelixcoord: 377..399
NoneNo IPR availableTMHMMTMhelixcoord: 62..81
NoneNo IPR availableTMHMMTMhelixcoord: 340..362
NoneNo IPR availableTMHMMTMhelixcoord: 219..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6300contigL-elsbetiae_contig6300:3278..5599 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6300.14938.1mRNA_L-elsbetiae_contig6300.14938.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6300 3278..5599 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6300.14938.1 ID=prot_L-elsbetiae_contig6300.14938.1|Name=mRNA_L-elsbetiae_contig6300.14938.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=416bp
MHRSQSNGRATATMSVQQDQTPAVPQPEFREDGAGGMTASEDKRGSHADF
LKKKFGRAMNHAAAFLSLGLFLEVAASFWTLGQAIASGVFVEADCGVRAL
SLYHNQELPRGCQQLDDSVVWFDEARTFSTFTSCGGDRLQGPNIEQLCDC
SKYDKVFGGCAWAAAASTRDAIEGLCVAVPVIQLNEEHQEEFGTTYEWVL
DSSELEFQDDCRPLNPEGFGDITIALLVVSLVIGIVEAYVGYKRWKDPLR
GADLVVFGSLVEAAGVLSIWGLLVFAPQGIVQAQTDDNPQVSEHQFSFLV
TLLGLVPIMTVVGTLAEVVFHRSAAAHGRLPYLGVLGNALIWLAAGVTEV
LVTAYLVWRLQFWKSEEDEAEADKENWPVLVGAVVGLIVLEAVALLSVWA
ARFFFARAKSMLLGAK
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