prot_L-elsbetiae_contig6285.14907.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6285.14907.1
Unique Nameprot_L-elsbetiae_contig6285.14907.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length438
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6285.14907.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 65..98
e-value: 9.2E-5
score: 22.5
coord: 253..294
e-value: 1.1E-7
score: 31.9
coord: 99..140
e-value: 3.1E-6
score: 27.2
coord: 219..250
e-value: 9.1E-6
score: 25.7
coord: 165..205
e-value: 2.1E-4
score: 21.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 164..325
e-value: 6.6E-7
score: 30.1
NoneNo IPR availablePANTHERPTHR32134:SF98coord: 261..416
coord: 142..322
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 142..322
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 261..416
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 65..276
NoneNo IPR availablePANTHERPTHR32134:SF98coord: 65..276
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 64..412

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6285contigL-elsbetiae_contig6285:4707..6020 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6285.14907.1mRNA_L-elsbetiae_contig6285.14907.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6285 4528..6453 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6285.14907.1 ID=prot_L-elsbetiae_contig6285.14907.1|Name=mRNA_L-elsbetiae_contig6285.14907.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=438bp
MDAPARKACSTTRPNAARVPAIRAYEVTWKLSALALRSMGSPLSRVKRFT
FDIWYDGDVRGVEWPRGLEELSFGYAFNQPIAAVAWPQSLLTLAFGEKFN
QPIDKIDWPPSLENLDLGDDFNQPVAGVKWPPCLKALFLGGKFNRAVEMV
TWPGSLKRMKFGFYFNRPISEVQWPASLEQLAFGYAFNQPVDGVQWPASL
QQLTFDGNFRHLVGDTSWPSSLQRLELGRHFNRPVNQVSWPHSIQQLEFG
LHFDQPIAAVTWPQSLRQLTFGYSFNKPIAAVSWPPSLQQLAFGHQFNQT
IFEVAWPASLQQLSFGDHFNQPINGERKPARDHFNQSVRGVPLGQRDNFN
QPVNKVRWPPSLLKVEFGECFDQPVDGAAWPASLRELTFSRDFSLPSENF
EWPASLEKLTIACRSNEPLPSWPGVRVSRIWRVYWGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf