prot_L-elsbetiae_contig6168.14745.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6168.14745.1
Unique Nameprot_L-elsbetiae_contig6168.14745.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length354
Homology
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BLAST of mRNA_L-elsbetiae_contig6168.14745.1 vs. uniprot
Match: D7FLR2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLR2_ECTSI)

HSP 1 Score: 213 bits (543), Expect = 2.240e-63
Identity = 113/171 (66.08%), Postives = 126/171 (73.68%), Query Frame = 0 
Query:    1 MDFLWRASNCLSLASPAVSRTYSDQLRKLCAQHEALSSAGDGPLLPEWVSDSLCGSCGAVLTPGVNCRVRIRHRSLASPSVKRVK--TRAKGKKEAKRLNEVVMTCLACGGVNARGGTERRAHDKKRRRRGG-----HVAGHSPEDMETPAGKKRARVATNLRGNFIPLGG 164
            MDFLWRASNCL L SPAVSR YSDQLRKLCA++EA    G GPLLPEWVSDSLC SCG +LTPG+ CR+R+RHRSLASPSVK+ K  TR +     K  NEVV TCL CGG+N RGGTER+A DKKRRRRGG          S E +E   GKKR R A  LRG++IPLGG
Sbjct:   45 MDFLWRASNCLRLVSPAVSRIYSDQLRKLCAEYEA-RRPGSGPLLPEWVSDSLCNSCGGILTPGITCRIRVRHRSLASPSVKKAKAKTRVEKTNTNKCRNEVVTTCLTCGGINTRGGTERQARDKKRRRRGGSRGRKQAVRDSGEGIEALKGKKRNRDAATLRGDYIPLGG 214
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BLAST of mRNA_L-elsbetiae_contig6168.14745.1 vs. uniprot
Match: A0A835Z2F4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2F4_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.440e-10
Identity = 44/130 (33.85%), Postives = 69/130 (53.08%), Query Frame = 0 
Query:    1 MDFLWRASNCLSLASPAVSRTYSDQLRKLCAQHEALSSAGDGPLLPEWVSDSLCGSCGAVLTPGVNCRVRIRHRSLASPSVKRVKTRAKGKKEAKR-----LNEVVMTCLACGGVNARGGTERRAHDKKR 125
            +DFLWRA+   +   P ++R Y+ Q + L A+ E  S  G      ++ +  LCG C + L PGVNC VR+RHRS  SP  +++  +++G    ++      N++VMTC  CG      G  + A   +R
Sbjct:   25 LDFLWRAAGAYAQPCPTLARRYAAQFKSL-ARVELHSIVGS-----DFFATDLCGHCHSRLEPGVNCTVRVRHRSKRSPLSRKLTAKSRGGAAPEQGLGRPQNQLVMTCALCGASTRLPGCTKSARQARR 148
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6168.14745.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLR2_ECTSI2.240e-6366.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z2F4_9STRA1.440e-1033.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007175RNAse P, Rpr2/Rpp21 subunitPFAMPF04032Rpr2coord: 1..108
e-value: 1.5E-17
score: 63.7
NoneNo IPR availableGENE3D2.20.25.200coord: 52..84
e-value: 1.6E-5
score: 26.5
NoneNo IPR availablePANTHERPTHR14742RIBONUCLEASE P SUBUNIT P21coord: 1..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6168contigL-elsbetiae_contig6168:3159..9884 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6168.14745.1mRNA_L-elsbetiae_contig6168.14745.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6168 3135..10284 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6168.14745.1 ID=prot_L-elsbetiae_contig6168.14745.1|Name=mRNA_L-elsbetiae_contig6168.14745.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=354bp
MDFLWRASNCLSLASPAVSRTYSDQLRKLCAQHEALSSAGDGPLLPEWVS
DSLCGSCGAVLTPGVNCRVRIRHRSLASPSVKRVKTRAKGKKEAKRLNEV
VMTCLACGGVNARGGTERRAHDKKRRRRGGHVAGHSPEDMETPAGKKRAR
VATNLRGNFIPLGGTNPSHAPATINTSAKDKYSSRPSPSVPPPPKKSGGS
RDGGACSSGNDSGRTSSKGRRGRAGTVARIGFSSGGGGDPTGPAAAIVAG
YNGEDSRRGNNTAGSNGPRQPIGGDCGGSKGGVSVGNPMRNADGDASGGG
ACAGGGGGDGRRGQEVSPPALSLLERIRRDAKKKRRQDAAAATAAAVAQN
GWR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007175Rpr2