prot_L-elsbetiae_contig616.14731.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig616.14731.1
Unique Nameprot_L-elsbetiae_contig616.14731.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length332
Homology
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BLAST of mRNA_L-elsbetiae_contig616.14731.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 2.350e-13
Identity = 113/178 (63.48%), Postives = 132/178 (74.16%), Query Frame = 0 
Query:   97 LDLIAQVLTAKQWAELLKAPLECAARQGNRGLAQKLLGAGAECGDSLHAATRGGHEGIANDLLENGAPVSAKGAYRYTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVILPCGYLETSVLHIAAEGGLVDIMRAAIERGADVNTGDANQNT 274
            +D I ++LT++Q AELL+A LE AA +GN+ LAQ+L+ AGAE GD+LH A  GGH  I +DLLE+ A ++A      TP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   L     +    H AA  G V+I+RA IE GADV+  DA Q T
Sbjct:    2 VDFIFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGDALHRAVDGGHREIVSDLLESEASLAATDMDGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRSTQFKCPATHAAALEGHVEILRAIIEHGADVDAVDAQQRT 179
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig616.14731.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KXK5_9PHAE2.350e-1363.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 172..187
score: 40.28
coord: 320..332
score: 36.48
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 271..300
e-value: 0.0034
score: 26.6
coord: 142..167
e-value: 4000.0
score: 0.5
coord: 304..331
e-value: 13.0
score: 14.7
coord: 171..200
e-value: 5.6E-6
score: 35.9
coord: 238..267
e-value: 1.0
score: 18.4
coord: 204..233
e-value: 12.0
score: 14.9
coord: 112..141
e-value: 280.0
score: 9.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 304..332
score: 13.01
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 238..270
score: 10.499
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 271..303
score: 12.823
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 171..203
score: 13.998
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 89..238
e-value: 2.6E-28
score: 100.6
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 239..332
e-value: 6.0E-28
score: 99.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 115..330
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 143..231
e-value: 2.6E-13
score: 50.3
coord: 243..331
e-value: 2.3E-14
score: 53.7
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 143..332
score: 57.352
NoneNo IPR availablePANTHERPTHR24134:SF3ANKYRIN REPEAT FAMILY PROTEINcoord: 243..305
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 243..305
NoneNo IPR availablePANTHERPTHR24134:SF3ANKYRIN REPEAT FAMILY PROTEINcoord: 269..331
coord: 142..212
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 142..212
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 269..331

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig616contigL-elsbetiae_contig616:15135..16130 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig616.14731.1mRNA_L-elsbetiae_contig616.14731.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig616 15135..16130 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig616.14731.1 ID=prot_L-elsbetiae_contig616.14731.1|Name=mRNA_L-elsbetiae_contig616.14731.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=332bp
HNTRARGKIPSVFSSASSRFVSLRWSFSRPTRCCCHIHRLYVVQQAPERE
RSTLEKLQSKPQQPRLPPKVRTGWITQGDMTNRDRREALRGAEEETLDLI
AQVLTAKQWAELLKAPLECAARQGNRGLAQKLLGAGAECGDSLHAATRGG
HEGIANDLLENGAPVSAKGAYRYTPLHVAAEKGKTEMVQLLLLHGADKDA
LDNREWTPLGVAAWHGHVAAALALLAGGADVILPCGYLETSVLHIAAEGG
LVDIMRAAIERGADVNTGDANQNTPLHIAACYNRVQAIDVLMEAGANIQT
RNDDGSTPLHLAAGDASLKAVLALLKHGADVK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom