prot_L-elsbetiae_contig6122.14684.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6122.14684.1
Unique Nameprot_L-elsbetiae_contig6122.14684.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length246
Homology
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BLAST of mRNA_L-elsbetiae_contig6122.14684.1 vs. uniprot
Match: D7G4G0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G0_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 7.000e-9
Identity = 77/123 (62.60%), Postives = 85/123 (69.11%), Query Frame = 0 
Query:   76 GRYSHLPSLASIGEGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRLGQPRGGNSAXXXXXXXXXXAKPGAGPEEDRALTADEFIVKRLLDQGKLGRMEAAQMMLEFQQAAVPGKDPAG 198
            GRYS LPSLASIGE +XXXXXXXXXXXXXXXXXXXXXXXXXXX     PR  Q  GG  A              A  E ++ LTADEFI+K+LLD+GKLGRMEAAQMMLE +  A  G+ P G
Sbjct:   75 GRYSSLPSLASIGEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQ--PRRAQSVGGVPAE-------------AEAEGEKPLTADEFIIKKLLDEGKLGRMEAAQMMLECRSDAGVGRLPEG 182
[Close]
BLAST of mRNA_L-elsbetiae_contig6122.14684.1 vs. uniprot
Match: A0A6H5L1X2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1X2_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 6.530e-8
Identity = 68/112 (60.71%), Postives = 75/112 (66.96%), Query Frame = 0 
Query:   76 GRYSHLPSLASIGEGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRLGQPRGGNSAXXXXXXXXXXAKPGAGPEEDRALTADEFIVKRLLDQGKLGRMEAAQMMLEFQ 187
            GRYS LPSLASIGE +XXXXXXXXXXXXXXXXXXXXX           PR  Q  GG  A              A  E ++ LTADEFI+K+LLD+GKLGRMEAAQMMLEF+
Sbjct:  384 GRYSSLPSLASIGEEDXXXXXXXXXXXXXXXXXXXXXRWRQRGQRQ--PRRAQSVGGVPAE-------------AEAEGEKPLTADEFIIKKLLDEGKLGRMEAAQMMLEFE 480
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6122.14684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4G0_ECTSI7.000e-962.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1X2_9PHAE6.530e-860.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 7..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..246
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6122contigL-elsbetiae_contig6122:6181..7971 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6122.14684.1mRNA_L-elsbetiae_contig6122.14684.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6122 6181..7971 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6122.14684.1 ID=prot_L-elsbetiae_contig6122.14684.1|Name=mRNA_L-elsbetiae_contig6122.14684.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=246bp
MSPEEQAEQAAAAAAAAAASAEALQQRRAAAAARFRARQQLDPQQAREKE
EEEEEEVEGRAEEGHGDGESDAESDGRYSHLPSLASIGEGNEDADDDDDS
VSSDYDSEGKDNNRGGGSSRARRPRLGQPRGGNSAQGAGAGGGGGAKPGA
GPEEDRALTADEFIVKRLLDQGKLGRMEAAQMMLEFQQAAVPGKDPAGGR
SGGDPVEQGGGEQGTEAGEVDVGGENESGLAPPGLARLAGDDTAPP
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