prot_L-elsbetiae_contig6115.14672.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6115.14672.1
Unique Nameprot_L-elsbetiae_contig6115.14672.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length192
Homology
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BLAST of mRNA_L-elsbetiae_contig6115.14672.1 vs. uniprot
Match: D8LI55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI55_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 1.770e-28
Identity = 71/154 (46.10%), Postives = 89/154 (57.79%), Query Frame = 0 
Query:   39 NLRSSTATALSDPGQP-EKGVGSPGVNTSPYRIYKVETPNEDPMLEVVVSFSTKSTAAPISTAKTTAKAKHHCAKDAPQTPSCPCVKVSSDGGSIIMEHEPAAKGGDGDRDGATAGAVRGRFMLNLPQKVVPGTAMSFFWQGDLIVRATLVGVE 191
            N+ ++ A A  +  Q  EK   +P  +   YRIYK+E P EDP +E+V SFS  + AAPISTA+              +   CP VK+SSDG   ++E  PAA  GDG  DG    A +GRF L LPQ+VVP TAMSFF +G L VRATL   E
Sbjct:   98 NVSNAAANASRNHEQDDEKATDAPATSRPEYRIYKIEMPGEDPTVEIVCSFSDGNLAAPISTARKK------------RLSGCPSVKISSDGRKFVVERNPAADAGDGGGDGV---AEKGRFRLQLPQRVVPTTAMSFFRKGQLTVRATLATSE 236
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6115.14672.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LI55_ECTSI1.770e-2846.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6115contigL-elsbetiae_contig6115:8926..9739 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6115.14672.1mRNA_L-elsbetiae_contig6115.14672.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6115 8926..9739 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6115.14672.1 ID=prot_L-elsbetiae_contig6115.14672.1|Name=mRNA_L-elsbetiae_contig6115.14672.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=192bp
DYIQPKPRRIRIQLEDDDDDDNDDDDDDDDDDKTNRGWNLRSSTATALSD
PGQPEKGVGSPGVNTSPYRIYKVETPNEDPMLEVVVSFSTKSTAAPISTA
KTTAKAKHHCAKDAPQTPSCPCVKVSSDGGSIIMEHEPAAKGGDGDRDGA
TAGAVRGRFMLNLPQKVVPGTAMSFFWQGDLIVRATLVGVE*
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