prot_L-elsbetiae_contig6111.14670.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6111.14670.1
Unique Nameprot_L-elsbetiae_contig6111.14670.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length813
Homology
BLAST of mRNA_L-elsbetiae_contig6111.14670.1 vs. uniprot
Match: A0A6H5L6Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Y7_9PHAE)

HSP 1 Score: 354 bits (909), Expect = 6.660e-102
Identity = 405/854 (47.42%), Postives = 468/854 (54.80%), Query Frame = 0
Query:    1 RLRKLVSGDARRTSAPPPSKSSSPSENPVPLLGCASSPNGVLVAFLEFCPPERSTRKAVQHIARKDTHCKVVLTPMVSAAAERAATAEGGRDSSWNFPLVRGALSTDWAWFLRAATLGNAAVHSGHEDVGSFSLIPTLRRALEDALMTVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTWS----ASPPGGLLWDLLRLHHLFVATAASVARCQASVHEPPLADNGDGPGGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLSEDVEDGEESWSRGRPVVAPPAPPPGPASQLLMPPSA-LSTPRKPNVKFAPRPTGNSSS-SRPKRVRNETSLDRKAAATMAKVKKIQRLQNAADRVSAAELAARASAVEAATRNRLVLLRAWERLPAVPESAEQGSGTVSNG-------------GNAGAGSDXXXXXXXXXXXXXXXXPVPGASAMTAQRTASSERWLREACWLARSRAGAVPGRPGQEAAQQPAVGAGAAGXXXXXXXXXXXXXXXXCLAGPLATPVMDLPREADVEVAL-----------SLLAEGRDDRESEIRRAG----EGSPRAPGA-AKKTSSASCSDDEECLLCGASVLSIGDRAAASVDAGAGVFGAKPGEDTGSSGA----QAPPAEAAXXXXXXXXXEKSGNVDVRAVAGGXXXXXXGGAVGATE----AAGALELPGWAVCRRGHRLRRCMDTLEPTLGVGYRRCEVCRCV-LVSPESFPGPEASEGGXXXXGGEERGVLSPGRGIASWMREESACVFCNVLLAPSSSAVNW 810
            RLRK VS   +R          SP +NP PLLGC++SPNGVLVA LEFC PERSTRKAVQ+ ARK THC+VVLTPM+  AAERAAT  GGRDSSWNFPL  G L TDWAW++RAA LG+A VHS  ED+  FSLIPT+R ALEDA++  A A                      XXXXXXXXXX         XXXXXXXXXXXXXX        +S    LLWDLLRLHH+F+ATAASVA CQA VH PP+ADNGDG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 XXXXXXXXX   S D     ++    +P + P               S  +  P+K   +FA    GN  + SRP+R RNE+ LD+K+AA+MA VKKI+R ++AADRVSAAE+AARAS   +A R+RL L+RAWE++   P     G G  +                N      XXXXXXXXXXXXXXXX      A+  QR A++ER LR AC LA +R+ +  GR G           G AG                 LAGPLATPV+DLP E DV  AL           + +  GRDD    + R G     G   AP   A      S + +E CLLCGA +LS  D AAA              +D  + G       P    A XXXXXXXX    +  V +   G                    GALELPGW VCRRGHR RR MDTL P  GVGYRRCEVCRCV  +SP      E    G    GG    + SP         + S CVFCNV+LA   SAV+W
Sbjct:  661 RLRKTVSRMTKRGEQ-------SPLKNPPPLLGCSASPNGVLVASLEFCRPERSTRKAVQNTARKGTHCRVVLTPMMPPAAERAATVTGGRDSSWNFPLSSGVLLTDWAWYIRAAILGDAVVHSTREDITPFSLIPTVRNALEDAILKAAEAARQGAPTGATRSRPRLKTTTEAXXXXXXXXXXNDVLPKASNXXXXXXXXXXXXXXXXXXXXXXSSRTPALLWDLLRLHHVFLATAASVAGCQADVHVPPVADNGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDSEISGVGSRDGKGVEXXXXXXXXXTAGSLDAASSRKAAPTRKPGMPPXXXXXXXXXXXXXXSSKQVPPPKKNTTRFA----GNCPAPSRPRRYRNESELDKKSAASMATVKKIKRRKSAADRVSAAEMAARASTAASAARSRLALMRAWEQVRLPPGDVTGGVGRATPAKVPKDVVSATPAADNXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAKQR-AAAERCLRAACGLASARSRSALGRTG-----------GTAGGF---------------LAGPLATPVIDLPLEQDVRAALLEPKGSGKMLDNRVRHGRDD----VSRGGVEGVAGQAAAPVLIASSAGPHSSAGEETCLLCGAPILS--DTAAAXXXXXXXXXXXXGADDPRARGTISIVSIPAGVGASXXXXXXXXXXXXDGKVGSRTAGEENASTSXXXXXXXXXXIVTGALELPGWVVCRRGHRFRRSMDTLAPIPGVGYRRCEVCRCVRALSPSCRD--EGDGLGVGGSGGSTAELASP--------PDTSTCVFCNVMLASCGSAVSW 1460          
BLAST of mRNA_L-elsbetiae_contig6111.14670.1 vs. uniprot
Match: D7FKE5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE5_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 9.670e-41
Identity = 191/463 (41.25%), Postives = 230/463 (49.68%), Query Frame = 0
Query:  385 RPKRVRNETSLDRKAAATMAKVKKIQRLQNAADRVSAAELAARASAVEAATRNRLVLLRAWERLPAVPESAEQGSGTVSNG------GNAGA----GSDXXXXXXXXXXXXXXXXPVPGASAMTAQRTASSERWLREACWLARSRAGAVPGRPGQEAAQQPAVGAGAAGXXXXXXXXXXXXXXXXCLAGPLATPVMDLPREADVEVAL-----------SLLAEGRDDRESEIRRAG----EGSPRAPGAAKKTSSA---SCSDDEECLLCGASVLSIGDRAAASVDAGAGVFGAKPGEDT---GSSGAQAPPAEAAXXXXXXXXXEKSGNVDVRA---VAGGXXXXXXGGAVGATE---AAGALELPGWAVCRRGHRLRRCMDTLEPTLGVGYRRCEVCRCVLVSPESFPGPEASEGGXXXXGGEERGVLSPGRGIASWMREESACVFCNVLLAPSSSAVNW 810
            RP+R RNE+ LD+K+AA+MA VK+I+R ++AADRVSAAE+AARA    +A R+RL L+RAWE++  +P     G GT +          A A       XXXXXXXXXXXXXXXX      A  A++ A++ER LR AC LA +R+ +  GR G           G AG                 LAGPLATPV+DLP E DV  AL           + +  GRDD    + R G     G    P  A  +SSA   S + +E CLLCGA +LS  D A                +D    G+S   + PA       XXXXX        +     AG              E    AGALELPGW VCRRGHR RR MDTL P  GVGYRRCEVCRCV     S    E   G     GG    + SP  G        S CVFCNV+LA S SAV+W
Sbjct:   83 RPRRYRNESELDKKSAASMATVKRIKRRKSAADRVSAAEMAARAXXXASAARSRLALMRAWEQVRLLPGDVAGGVGTPATVPKDAVLATAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVAKQRAAAERCLRAACGLASARSRSALGRTG-----------GTAGGF---------------LAGPLATPVIDLPLERDVRAALLEPEGSGKMHVNGVRHGRDD----VSRGGVQGVAGQAATP--ALFSSSAGPHSSAGEETCLLCGAPILS--DAAXXXXXXXXXXXXXXXADDPRARGTSSIVSTPAGVGASPTXXXXXXXXXXXXXKVGSRTAGEENVSTSXXXXXXXEDRVVAGALELPGWVVCRRGHRFRRSMDTLAPIPGVGYRRCEVCRCVRSLSRSCRDEEDGLG-VGGSGGSSAELASPPDG--------STCVFCNVMLASSGSAVSW 502          
BLAST of mRNA_L-elsbetiae_contig6111.14670.1 vs. uniprot
Match: D7FKE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE4_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 8.380e-38
Identity = 83/122 (68.03%), Postives = 93/122 (76.23%), Query Frame = 0
Query:    1 RLRKLVSGDARRTSAPPPSKSSSPSENPVPLLGCASSPNGVLVAFLEFCPPERSTRKAVQHIARKDTHCKVVLTPMVSAAAERAATAEGGRDSSWNFPLVRGALSTDWAWFLRAATLGNAAV 122
            RLRK VS   +R          SP +NP PLLGC++SPNGVLVA LEFC PERSTRKAVQ+ ARK THC+VVLTPM+  AAERAAT  GGRDSSWNFPL  G L TDWAW++RAA LG+AAV
Sbjct:  476 RLRKTVSRLTKRGQQ-------SPLKNPPPLLGCSASPNGVLVASLEFCRPERSTRKAVQNTARKGTHCRVVLTPMIPPAAERAATVTGGRDSSWNFPLSSGVLLTDWAWYIRAAILGDAAV 590          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6111.14670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L6Y7_9PHAE6.660e-10247.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKE5_ECTSI9.670e-4141.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FKE4_ECTSI8.380e-3868.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6111contigL-elsbetiae_contig6111:795..4445 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6111.14670.1mRNA_L-elsbetiae_contig6111.14670.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6111 795..4445 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6111.14670.1 ID=prot_L-elsbetiae_contig6111.14670.1|Name=mRNA_L-elsbetiae_contig6111.14670.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=813bp
RLRKLVSGDARRTSAPPPSKSSSPSENPVPLLGCASSPNGVLVAFLEFCP
PERSTRKAVQHIARKDTHCKVVLTPMVSAAAERAATAEGGRDSSWNFPLV
RGALSTDWAWFLRAATLGNAAVHSGHEDVGSFSLIPTLRRALEDALMTVA
TAAAAAPAATSTAEDRSSAAARSRPRCKPTPPPGAAVAVAAATARGGEAA
GGGGGSGQTWSASPPGGLLWDLLRLHHLFVATAASVARCQASVHEPPLAD
NGDGPGGTDDDDDDDDDGDGDHGGGDGGGGASDGNEGSSASAAVENGGGG
GGGVSSGKRKGKSKSKGKGKGKGKLSEDVEDGEESWSRGRPVVAPPAPPP
GPASQLLMPPSALSTPRKPNVKFAPRPTGNSSSSRPKRVRNETSLDRKAA
ATMAKVKKIQRLQNAADRVSAAELAARASAVEAATRNRLVLLRAWERLPA
VPESAEQGSGTVSNGGNAGAGSDGGGAPGAAALQQHHHPPVPGASAMTAQ
RTASSERWLREACWLARSRAGAVPGRPGQEAAQQPAVGAGAAGANGAGGG
GASVVGGGGCLAGPLATPVMDLPREADVEVALSLLAEGRDDRESEIRRAG
EGSPRAPGAAKKTSSASCSDDEECLLCGASVLSIGDRAAASVDAGAGVFG
AKPGEDTGSSGAQAPPAEAAAAGDDGGGGEKSGNVDVRAVAGGGGEGKKG
GAVGATEAAGALELPGWAVCRRGHRLRRCMDTLEPTLGVGYRRCEVCRCV
LVSPESFPGPEASEGGGGGAGGEERGVLSPGRGIASWMREESACVFCNVL
LAPSSSAVNWLG*
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