prot_L-elsbetiae_contig611.14667.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig611.14667.1
Unique Nameprot_L-elsbetiae_contig611.14667.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length767
Homology
BLAST of mRNA_L-elsbetiae_contig611.14667.1 vs. uniprot
Match: A0A6H5KZN5_9PHAE (tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZN5_9PHAE)

HSP 1 Score: 776 bits (2003), Expect = 1.150e-270
Identity = 468/802 (58.35%), Postives = 529/802 (65.96%), Query Frame = 0
Query:    1 SLLASSLSLTSKAWSTIKRAGACACCAARLAGCRDPAIYACNERHLRVQLDARFREAASNDAVDDGDGVALEGAGEGCCPLCLGLLQAEITIRMAPRPQRSSEVHGDHNRACEQAGVPTQQPPSLPRANDKGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAPDN-------------GFSRARMVDAIAECITTRGYSVTSFEITAAVPACLVLRDAAFLETGLG---VSPAVTSDETKP---------------SASTTPPXXXXXXXXVKEALKVGLNRALQNRFLTRNEVPAAEVEGFSAQGSPAASASELGSDFLVEVTAKAPEADAHAMTALLGGPAPSRP-AGAKQHAW-RGGGKWAKKRQRREEQRNPGLTVGAVKKGLAGLDDAGRERMRRWVEGLMGEEKWGEGGSEGGEALVTDKGQACVGEEAGRGGGESSNRGAAAVVGVDKAADADEREDPDTAGNGVAAVPPTPPEEAVIANSNSDGIDAVA--SSAVTAAVDRPPPNPRGGASGSTDASPGSTPRMEATCEVAVRRRSIHFWGRYTKHSRSVPQTPWIRGFFSVQEAVSEPFEAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVDSLRTVDEVAARLPSLEAAINAAGGCKNAGGGVAVSRLRVAGPAELPSDVQAVGEGKRKHYRCVVWVSRAVRREEVVKML-RDAPEELVVQQATPIRVLHRRTLLDRPRSIFDMRAEWINEHFFQLDLTTSAGTYIKEFVHGDLGRTVPSIGSLLNCRADILQLDVTDVEDKWSAEE 766
            SLLA SLSLTS AWS IKR GACACCAARL  CRDPA+YAC+ER LR QLDARFR   S +A ++G       A E CCPLCLGLLQ E+ IR+A RP+ SSEVHGDHNR+CEQA +P   PP+   A+D                                          AAP N             G+ R+RM +AI ECIT RGY+VTSF +TAAVPACL +R+AAFLE GLG   +SP  +  +                  + +            VKEALK+GL R L+    TR E  AA      A      +     SDF+VEVTA+APEADAHA TALLGGPAPS   AG     W  GGG+WAKKRQRREEQRNPGLTVGAVKKGL  +DDAGRERMRRWV+GL+ E + G          + +   A +G   G     S  R A  V G D   DA+ +   D+ G  V  V  TP    V+     +G  A A   + V  A   PPP+     +     S G+    EA CEVA+RR+SIHFWGRYTK SRSVPQTPW +GF+SVQEAVSEPF+AFSGCVEGLLHGAGREDV+VRMLGKGRPFCLELVDSLR+VDE+AARLPSL  A+N AGG KN GGGVAVSRLRVAGP ELPSDVQAVGEGKRKHYRCVVWVSR V +EE+VK L  DAPEELVVQQATPIRVLHRRTLLDRPRSIF MRAEWINEHFFQL+L TSAGTYIKEFVHGDLGRTVPSIGSLL+CRADILQLDVT+VED+WSA E
Sbjct:   21 SLLAGSLSLTSGAWSAIKRTGACACCAARLVACRDPAVYACDERALRAQLDARFR---STNAANEGSAAVTSTARERCCPLCLGLLQHEVPIRIAARPRPSSEVHGDHNRSCEQASLP--MPPAA-GASDTQSQEIAPPPVFAEKTEAPGSTTAMAIDRCERQALDETATAVAAPGNSNGSSTSDTCRNTGYCRSRMAEAIVECITARGYTVTSFGVTAAVPACLAVRNAAFLEAGLGGCDLSPEPSHQQXXXXXXXXXXXXXXXXXAAPTRAGQISRQAVVPVKEALKIGLARTLRAHLQTRQEAAAAVXXXXXA----VVTVDHQDSDFMVEVTARAPEADAHAATALLGGPAPSHSGAGKPPRGWPAGGGRWAKKRQRREEQRNPGLTVGAVKKGLNEMDDAGRERMRRWVQGLIQERRTG--------GEIEEVPVASLGGITGAADSSSGGRAAEVVRGGDGVVDAEPK---DSTGQAVDGV--TPVSGTVVGGDAREGSPAAAPAEAPVVRAAGVPPPSATPSDASIHPTSGGA----EALCEVAIRRKSIHFWGRYTKLSRSVPQTPWFKGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVDVRMLGKGRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNVGGGVAVSRLRVAGPGELPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLLDCRADILQLDVTNVEDRWSAAE 795          
BLAST of mRNA_L-elsbetiae_contig611.14667.1 vs. uniprot
Match: D8LRA8_ECTSI (tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA8_ECTSI)

HSP 1 Score: 625 bits (1612), Expect = 1.250e-214
Identity = 371/607 (61.12%), Postives = 425/607 (70.02%), Query Frame = 0
Query:  184 MVDAIAECITTRGYSVTSFEITAAVPACLVLRDAAFLETGLG---VSPAVTSDETKP---------------SASTTPPXXXXXXXXVKEALKVGLNRALQNRFLTRNEVPAAEVEGFSAQGSPAASASELGSDFLVEVTAKAPEADAHAMTALLGGPAPSRP-AGAKQHAW-RGGGKWAKKRQRREEQRNPGLTVGAVKKGLAGLDDAGRERMRRWVEGLMGEEKWGEGGSEGGEALVTDKGQACVGEEAGRGGGESSNRGAAAVVGVDKAADADEREDPDTAGNGVAAVPPTPPEEAVIANSNSDGIDAV--ASSAVTAAVDRPPPNPRGGASGSTDASPGSTPRMEATCEVAVRRRSIHFWGRYTKHSRSVPQTPWIRGFFSVQEAVSEPFEAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVDSLRTVDEVAARLPSLEAAINAAGGCKNAGGGVAVSRLRVAGPAELPSDVQAVGEGKRKHYRCVVWVSRAVRREEVVKML-RDAPEELVVQQATPIRVLHRRTLLDRPRSIFDMRAEWINEHFFQLDLTTSAGTYIKEFVHGDLGRTVPSIGSLLNCRADILQLDVTDVEDKWSAEEE 767
            M +AI EC+TTRGY+VTSF +TAAVPACL +R+AAFLE GLG   +SP  +                     + +            VKEALK+GL   L+    TR E    E    +A  +   +     SDF+VEVTA+APEADAHA TALLGGPAPSR  AG     W  GGG+WAKKRQRRE+QRNPGLTVGAVKKGL  +DDAGRERMRRWV+GL+ E + G G  EG    + ++  A +G                 V G D   DA+ +   D+ G  V  V  TP    V      +G  A   A + V  A   PPP+     + +   S G+    EA CEVA+RR+ IHFWGRYTK SRSVPQTPW +GF+SVQEAVSEPF+AFSGCVEGLLHGAGREDV+VRMLGKGRPFCLELVDSLR+VDE+AARLPSL  A+N AGG KNAGGGVAVSRL+V+GP ELPSDVQAVGEGKRKHYRCVVWVSR V +EE+VK L  DAPEELVVQQATPIRVLHRRTLLDRPRSIF MRAEWINEHFFQL+L TSAGTYIKEFVHGDLGRTVPSIGSLL+CRADILQLDVT+VED+WSA E+
Sbjct:    1 MAEAIVECVTTRGYTVTSFGVTAAVPACLAVRNAAFLEAGLGGCDLSPKPSHQXXXXXXXXXXXXXXXXXXXAPTRAGQISRQAVVPVKEALKIGLAHVLKAHLQTRQE----EAAAVAAVTAAVVTVDHQDSDFMVEVTARAPEADAHAATALLGGPAPSRSGAGKPPRGWPAGGGRWAKKRQRREQQRNPGLTVGAVKKGLNEMDDAGRERMRRWVQGLIEERRTGGGIEEG----IEEEPVASIGGATRAXXXXXXXXXXXVVGGGDGVVDAEPK---DSTGQAVDGV--TPVSGTVAGGDAREGSPAAIPAEAPVVRAAGPPPPSATPSDASTHPTSAGA----EALCEVAIRRKPIHFWGRYTKLSRSVPQTPWFKGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVDVRMLGKGRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNAGGGVAVSRLQVSGPGELPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLLDCRADILQLDVTNVEDRWSAAED 590          
BLAST of mRNA_L-elsbetiae_contig611.14667.1 vs. uniprot
Match: A0A836CNG6_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNG6_9STRA)

HSP 1 Score: 245 bits (626), Expect = 2.790e-67
Identity = 139/264 (52.65%), Postives = 177/264 (67.05%), Query Frame = 0
Query:  513 CEVAVRRRSIHFWGRYTKHSRSVPQTPW--------IR-GFFSVQEAVSEPFEAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVDSLRTVDEVAARLPSLEAAINAAGGCKNAGGGVAVSRLRVAGPAELPSDVQAVGEGKRKHYRCVVWVSRAVRREEVVKMLRDAPE--ELVVQQATPIRVLHRRTLLDRPRSIFDMRAEWINEHFFQLDLTTSAGTYIKEFVHGDLGRTVPSIGSLLNCRADILQLDVTDVEDKWSAE 765
            C  A+ R+  + +GRY K SRSVPQ+PW        +R G  SVQE V+ P EA + C E  L GAGRED++VRMLG GRPF LE++DS  T  ++A  LP L+  +NA  G  N+ G V VS  ++ G  ++ S +Q   EGKRKHYRCVVW SR V + E+   L   P   +L V+Q+TP+RVLHRR  L R +++  +RA  +   FF L LTTSAGTY+KEFVHGDLGRTVPS+G+LL CRADILQLDV  V+D+WS E
Sbjct:  417 CAAALERQPQYVFGRYRKLSRSVPQSPWTVGRGADAVRIGDASVQEIVAAPLEALARCREVKLAGAGREDMDVRMLGNGRPFVLEVIDSKVTAQQLADALPRLQREVNACTGL-NSEGAVEVSDFKLVG-RDIYSQIQEGAEGKRKHYRCVVWTSRDVSQAELDAALHAHPPGADLEVRQSTPVRVLHRRAALTRVKTVRALRAARVAPRFFVLSLTTSAGTYVKEFVHGDLGRTVPSVGALLGCRADILQLDVVGVDDRWSQE 678          
BLAST of mRNA_L-elsbetiae_contig611.14667.1 vs. uniprot
Match: A0A8J5Y2V0_DIALT (tRNA pseudouridine(55) synthase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y2V0_DIALT)

HSP 1 Score: 208 bits (530), Expect = 1.240e-55
Identity = 125/259 (48.26%), Postives = 158/259 (61.00%), Query Frame = 0
Query:  513 CEVAVR--RRSIHFWGRYTKHSRSVPQTPWI-----RGFFSVQEAVSEPFEAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVDS--LRTVDEVAARLPSLEAAINAAGGCKNAGGGVAVSRLRVAGPAELPSDVQAVGEGK-RKHYRCVVWVSRAVRREEVVKMLRDAPEELVVQQATPIRVLHRRTLLDRPRSIFDMRAEWINEHFFQLDLTTSAGTYIKEFVHGDLGRTVPSIGSLLNCRADILQLDVTDVEDK 761
            C  ++R     +   GRY K+SR +PQTPW      RG  SVQE +    +        + HGAGREDV+VRMLG GRPF +E+ +   L     V   L  LEAAIN A         V VS+LRV  P+    D+   GE + RK YRCVVW+SR V   EV   L D   E++++Q TPIRVLHRR LL RPR+++ MR+E +N H+  LDL T +GTY+KEFVHGD GRT P++GSLL C ADILQLDV  + D+
Sbjct:  241 CSASLRASHAPVCIGGRYNKYSREMPQTPWWLDNEKRGISSVQEELQTVLQPAYAASATVFHGAGREDVDVRMLGSGRPFVIEMQEPACLEPGTAVGTPLAELEAAINLASEH------VQVSQLRVV-PSSSIGDLVREGESEHRKAYRCVVWLSRRVSAREVADKL-DGAGEVLLEQRTPIRVLHRRPLLTRPRTVYSMRSELLNGHYLMLDLVTQSGTYVKEFVHGDFGRTHPNVGSLLGCSADILQLDVLSILDE 491          
BLAST of mRNA_L-elsbetiae_contig611.14667.1 vs. uniprot
Match: A0A0D2WJ29_CAPO3 (tRNA pseudouridine(55) synthase n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WJ29_CAPO3)

HSP 1 Score: 208 bits (530), Expect = 2.090e-54
Identity = 125/253 (49.41%), Postives = 163/253 (64.43%), Query Frame = 0
Query:  519 RRSIHFWGRYTKHSRSVPQTPWI-----RGFFSVQEAVSEPFEAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVDSLRTVDEVAARLPSLEAAINAAGGCKNAGGGVAVSRLRVAGPAELPSDVQAVGEG---KRKHYRCVVWVSRAVRREEVVKMLRDAPEELVVQQATPIRVLHRRTLLDRPRSIFDMRAEWINEHFFQLDLTTSAGTYIKEFVHGDLGRTVPSIGSLL-NCRADILQLDVTDVEDKW 762
            R  I   GRY K+SR V Q+P+I     +G  SV E ++ P  A+ G  E  L  +GRED++VRMLG+GRPF LE+ D+ R+      +L  L+A +N A     AGG V +  L VA  A++P    A+ EG   K+K Y  V+WVSR +  E++  + R  PEE+VVQQ TP+RV+HRR +  RPRS++ MRA  INEH+  L L+T AGTYIKEF HGD GRT PSIGSLL NC ADI+QLDV D++  W
Sbjct:  392 RDPIFIGGRYNKYSRVVSQSPYIVGEERKGDTSVHELIAAPMLAYCGASEIKLSSSGREDMDVRMLGRGRPFVLEIADARRS-SLTPDKLAHLQALVNDA-----AGGRVHIRDLIVAQRADIP----ALNEGEDDKKKLYGAVIWVSRPITAEDIAALTR--PEEMVVQQMTPLRVMHRRAICTRPRSVYWMRAHQINEHYLLLCLSTQAGTYIKEFAHGDFGRTAPSIGSLLGNCEADIVQLDVLDIDMPW 632          
BLAST of mRNA_L-elsbetiae_contig611.14667.1 vs. uniprot
Match: A0A7S2DMJ9_9EUKA (tRNA pseudouridine(55) synthase n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DMJ9_9EUKA)

HSP 1 Score: 194 bits (494), Expect = 1.930e-52
Identity = 117/259 (45.17%), Postives = 157/259 (60.62%), Query Frame = 0
Query:  503 PGSTPRMEATCEVAVRRRSIHFWGRYTKHSRSVPQTPWI-----RGFFSVQEAVSEPFEAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVDSLRTVDEVAARLPSLEAAINAAGGCKNAGGGVAVSRLRVAGPAELPSDVQAVGEGKRKHYRCVVWVSRAVRREEVVKMLRDAPEELVVQQATPIRVLHRRTLLDRPRSIFDMRAEWINEHFFQLDLTTSAGTYIKEFVHGDLGRTVPSIGSLLNCRADILQLDVT 756
            P   P +  +  V+V R ++   GRY K+SR +PQ+PWI     +   SV E +++      G  EG  H AGREDV+VRMLG GRPF +EL+ + RT    AA++  L+  INA G        + +  LR    A + S ++   E  RK YRCVV +SR +   ++ K+  ++  ELV +Q TP+RVLHRRTL+ R R+I  + A  +     QLDLTT AGTY+KEFVHGD GRT PS+GSLL C ADI+QLDVT
Sbjct:   65 PPPIPTVPCSVSVSVDRDAVTLTGRYRKYSRMLPQSPWIVEGGRKCAGSVAECITDLAVPLFGASEGKFHSAGREDVDVRMLGTGRPFMVELL-APRTPYRTAAQIAELQENINACGL-------IEIEGLRECSHAVVSSIMKEGEEAHRKDYRCVVCLSRTLTPADIEKI--NSTRELVTKQLTPMRVLHRRTLMIRERTIHRLDAVVLGPRMLQLDLTTQAGTYVKEFVHGDFGRTDPSLGSLLGCEADIMQLDVT 313          
BLAST of mRNA_L-elsbetiae_contig611.14667.1 vs. uniprot
Match: A0A8K1C5Y9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5Y9_PYTOL)

HSP 1 Score: 194 bits (492), Expect = 3.550e-50
Identity = 115/256 (44.92%), Postives = 155/256 (60.55%), Query Frame = 0
Query:  508 RMEATCEVAVRRRSIHFWGRYTKHSRSVPQTPWI-----RGFFSVQEAVSE---PFEAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVDSLRTVDEVAARLPSLEAAINAAGGCKNAGGGVAVSRLRVAGPAELPSDVQAVGEGKRKHYRCVVWVSRAVRREEVVKMLRDAPEELVVQQATPIRVLHRRTLLDRPRSIFDMRAEWINEHFFQLDLTTSAGTYIKEFVHGDLGRTVPSIGSLLNCRADILQLDV 755
            + + TC V + R  ++  GRY K+ R + QTPW+      G  SV+E + E   PF   SG      H AGREDV+VRMLG GRPF LE++D+ ++     A    L+AA+N         G V +  ++ A   E    +QA  + KRK Y CVVW  + +  + V K+  DA  +L +QQ TPIRVLHRRTL+ RP+ I   + E +N+H+  L LTTSAGTY+KEFVHGD GRTVP++ ++L C ADILQLDV
Sbjct:  262 QSQPTCGVVLERDPVYIQGRYLKYKRGLSQTPWVLDGVRMGDSSVEECIGEVGLPFFKGSGY---KFHTAGREDVDVRMLGNGRPFILEILDAKKS-KLTPAEYEQLQAAVNT-----THQGAVEIREVK-ASTKEYFGKLQAGADSKRKTYCCVVWSEKELTPDLVAKL--DAIHDLTIQQQTPIRVLHRRTLMTRPKVIHATKCEVLNKHYMLLRLTTSAGTYVKEFVHGDRGRTVPNVSTILECEADILQLDV 505          
BLAST of mRNA_L-elsbetiae_contig611.14667.1 vs. uniprot
Match: A0A5D6XHV3_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHV3_9STRA)

HSP 1 Score: 191 bits (486), Expect = 1.280e-49
Identity = 113/264 (42.80%), Postives = 155/264 (58.71%), Query Frame = 0
Query:  502 SPGSTPRMEATCEVAVRRRSIHFWGRYTKHSRSVPQTPWI-----RGFFSVQEAVSEPFEAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVDSLRTVDEVAARLPSLEAAINAAGGCKNAGGGVAVSRLRVAGPAELPSDVQAVGEGKRKHYRCVVWVSRAVRREEVVKMLRDAPEELVVQQATPIRVLHRRTLLDRPRSIFDMRAEWINEHFFQLDLTTSAGTYIKEFVHGDLGRTVPSIGSLLNCRADILQLDVTDVED 760
            SP S      T  V + R  ++  GRY K  R + Q+PW+      G  SV+EA+ +    +        H AGREDV+VRMLG GRPF LE++D+ +  +  AA    +E  +NAA        G+   R   A   E  + +QA  + K+K Y CVVW    +  E V K+  DA ++L +QQ TP+RVLHRRTL+ RP+ I   + E +N+H+  L LTTSAGTY+KEFVHGD GRT+P++ S+L C ADILQLDV ++ D
Sbjct:  226 SPPSLLSSRPTVVVTLERDPVYLQGRYLKFKRGLSQSPWVLEGVRMGESSVEEAIGDIALPYFRGASYKFHTAGREDVDVRMLGNGRPFILEVIDA-KKANLTAAEYKEVEDVVNAANV------GIVEIRHTKASTKEYFAGLQAGADSKKKTYCCVVWSEAELTPEAVAKL--DAIQDLTIQQETPVRVLHRRTLMTRPKVIHSAKCEVLNKHYMLLRLTTSAGTYVKEFVHGDRGRTLPNVSSILGCDADILQLDVENLLD 480          
BLAST of mRNA_L-elsbetiae_contig611.14667.1 vs. uniprot
Match: A0A5A8CYU0_CAFRO (tRNA pseudouridine(55) synthase n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CYU0_CAFRO)

HSP 1 Score: 186 bits (473), Expect = 3.880e-49
Identity = 124/272 (45.59%), Postives = 156/272 (57.35%), Query Frame = 0
Query:  503 PGSTPRMEATCEVAVRRRSIHFWGRYTKHSRSVPQTPW-IRG----FFSVQEAVSEPFEAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVD------SLRTVDEVAARLPSLEAAINAAGGCKNAGGGVAVSRLRVAGPAELPSDVQAVGEG---KRKHYRCVVWVSRAVRREEVVKMLRDAPEELVVQQATPIRVLHRRTLLDRPRSIFDMRAEWINEHFFQLDLTTSAGTYIKEFVHGDLGRTVPSIGSLLNCR--ADILQLDVTDV 758
            P   P   A   VAVRR S+   GRY+K +R V QT W + G    + SV+E  ++      G  +  LHG+GREDV+VRMLG GRPF LEL        S   +D+ A R+               +  GV V+ LR+A      SDV AV  G   KRK Y  +V    AV  E + + L DA +EL V Q TP+RVLHRR+L+DRP+ I  MR  W+N H+F L L TSAG Y+KEFVHGDLGRT P++G+LL     ADILQLDV +V
Sbjct:   55 PPKCPAEPAEGWVAVRRESLFVRGRYSKTARGVSQTAWRLEGQEGLYRSVEEVAADHLAPLFGAADSRLHGSGREDVDVRMLGGGRPFVLELKQPRISSVSQAAIDQAAMRI-------------NRSPEGVTVTELRLA----TTSDVDAVTAGAGDKRKEYAALVRCRAAVTPEFLRERL-DAVKELAVCQTTPVRVLHRRSLMDRPKVIHGMRTRWVNAHWFVLRLVTSAGAYVKEFVHGDLGRTQPNVGALLGDEGGADILQLDVLNV 308          
BLAST of mRNA_L-elsbetiae_contig611.14667.1 vs. uniprot
Match: A0A3P3YJ11_PLABS (tRNA pseudouridine(55) synthase n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YJ11_PLABS)

HSP 1 Score: 188 bits (477), Expect = 2.470e-48
Identity = 113/267 (42.32%), Postives = 154/267 (57.68%), Query Frame = 0
Query:  503 PGSTPRMEATCEVAVRRRSIHFWGRYTKHSRSVPQTPWI-----RGFFSVQEAVSEPFEAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVD-----SLRTVDEVAARLPSLEAAINAAGGCKNAGGGVAVSRLRVAGP-AELPSDVQAVGEGKRKHYRCVVWVSRAVRREEVVKMLRDAPEELVVQQATPIRVLHRRTLLDRPRSIFDMRAEWINEHFFQLDLTTSAGTYIKEFVHGDLGRTVPSIGSLLNCRADILQLDVTDV 758
            P  T        + V R+ +   G+Y K  R + Q+PW+     +   SVQE +++   AF  C +   H AGREDV+VRMLG GR F LE++D     SL+ ++E+  R+              N+   + V  L VA   A+    +QA  + KRK YR ++W S A+  E V  +   AP E  +QQ TPIRVLHRR+LL RPR+I+++    IN+HF  LDL   AGTYIKEFVHGD GRT PS+G +L C+ADI+QLDV D+
Sbjct:  232 PAKTTVAPCVIAITVSRQPVLITGKYRKFCRLLSQSPWVIDNKRKTESSVQELIADQVTAFIKCSDIKFHSAGREDVDVRMLGDGRHFVLEMIDPRRVPSLKELEELCLRI-------------NNSTDRIEVHSLSVAPDYAKEFKTLQAGADSKRKSYRAIMWTSAALTDEAVRTLQGSAPIE--IQQKTPIRVLHRRSLLSRPRTIYELSITRINKHFAVLDLVAQAGTYIKEFVHGDRGRTTPSVGDILTCQADIVQLDVMDL 483          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig611.14667.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZN5_9PHAE1.150e-27058.35tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus... [more]
D8LRA8_ECTSI1.250e-21461.12tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus... [more]
A0A836CNG6_9STRA2.790e-6752.65tRNA pseudouridine(55) synthase n=1 Tax=Tribonema ... [more]
A0A8J5Y2V0_DIALT1.240e-5548.26tRNA pseudouridine(55) synthase n=1 Tax=Diacronema... [more]
A0A0D2WJ29_CAPO32.090e-5449.41tRNA pseudouridine(55) synthase n=2 Tax=Capsaspora... [more]
A0A7S2DMJ9_9EUKA1.930e-5245.17tRNA pseudouridine(55) synthase n=1 Tax=Haptolina ... [more]
A0A8K1C5Y9_PYTOL3.550e-5044.92Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XHV3_9STRA1.280e-4942.80tRNA pseudouridine(55) synthase n=1 Tax=Pythium br... [more]
A0A5A8CYU0_CAFRO3.880e-4945.59tRNA pseudouridine(55) synthase n=3 Tax=Cafeteria ... [more]
A0A3P3YJ11_PLABS2.470e-4842.32tRNA pseudouridine(55) synthase n=2 Tax=Plasmodiop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.2510coord: 521..647
e-value: 6.3E-22
score: 80.0
NoneNo IPR availableGENE3D3.30.70.3190coord: 649..759
e-value: 9.8E-40
score: 136.5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..767
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
IPR039894tRNA pseudouridine synthase Pus10-likePANTHERPTHR21568UNCHARACTERIZEDcoord: 11..762
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 645..759

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig611contigL-elsbetiae_contig611:27237..30073 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig611.14667.1mRNA_L-elsbetiae_contig611.14667.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig611 27237..30073 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig611.14667.1 ID=prot_L-elsbetiae_contig611.14667.1|Name=mRNA_L-elsbetiae_contig611.14667.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=767bp
SLLASSLSLTSKAWSTIKRAGACACCAARLAGCRDPAIYACNERHLRVQL
DARFREAASNDAVDDGDGVALEGAGEGCCPLCLGLLQAEITIRMAPRPQR
SSEVHGDHNRACEQAGVPTQQPPSLPRANDKGPPPAAATAATAPTIAVED
DKLPASDHAAASAAGDRASTTAAAPDNGFSRARMVDAIAECITTRGYSVT
SFEITAAVPACLVLRDAAFLETGLGVSPAVTSDETKPSASTTPPTTPPAV
VPVKEALKVGLNRALQNRFLTRNEVPAAEVEGFSAQGSPAASASELGSDF
LVEVTAKAPEADAHAMTALLGGPAPSRPAGAKQHAWRGGGKWAKKRQRRE
EQRNPGLTVGAVKKGLAGLDDAGRERMRRWVEGLMGEEKWGEGGSEGGEA
LVTDKGQACVGEEAGRGGGESSNRGAAAVVGVDKAADADEREDPDTAGNG
VAAVPPTPPEEAVIANSNSDGIDAVASSAVTAAVDRPPPNPRGGASGSTD
ASPGSTPRMEATCEVAVRRRSIHFWGRYTKHSRSVPQTPWIRGFFSVQEA
VSEPFEAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVDSLRTVDEVA
ARLPSLEAAINAAGGCKNAGGGVAVSRLRVAGPAELPSDVQAVGEGKRKH
YRCVVWVSRAVRREEVVKMLRDAPEELVVQQATPIRVLHRRTLLDRPRSI
FDMRAEWINEHFFQLDLTTSAGTYIKEFVHGDLGRTVPSIGSLLNCRADI
LQLDVTDVEDKWSAEEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039894Pus10-like
IPR020103PsdUridine_synth_cat_dom_sf