prot_L-elsbetiae_contig611.14666.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig611.14666.1
Unique Nameprot_L-elsbetiae_contig611.14666.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length140
Homology
BLAST of mRNA_L-elsbetiae_contig611.14666.1 vs. uniprot
Match: D8LK28_ECTSI (VWFA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK28_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 2.040e-18
Identity = 56/115 (48.70%), Postives = 77/115 (66.96%), Query Frame = 0
Query:    1 MSMEIVTGHAASQAGNMASKGAYQSARVSMRAWSHLMQRTATTPEAEAQVQQYAVQMTALDNEVIRAQRSESFVQ--DMGGSVNSATEGARFGKSRKAARSRNDGFSHQVYSSKA 113
            M M +V GHA+S +G +ASKGAYQS RV+MRAW++LM R  T  E  AQV+ Y + M ALD+EV++AQRSE        GG+V+   E    G++RK+ARS ND  S+  + +K+
Sbjct:  733 MEMAVVAGHASSASGVLASKGAYQSTRVTMRAWNNLMSRNQTR-ETRAQVETYGMAMQALDSEVVQAQRSEGGAGFGHAGGAVDDVLESLVHGRARKSARSGNDSLSYNAFRAKS 846          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig611.14666.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LK28_ECTSI2.040e-1848.70VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig611contigL-elsbetiae_contig611:20028..25094 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig611.14666.1mRNA_L-elsbetiae_contig611.14666.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig611 19672..25220 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig611.14666.1 ID=prot_L-elsbetiae_contig611.14666.1|Name=mRNA_L-elsbetiae_contig611.14666.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=140bp
MSMEIVTGHAASQAGNMASKGAYQSARVSMRAWSHLMQRTATTPEAEAQV
QQYAVQMTALDNEVIRAQRSESFVQDMGGSVNSATEGARFGKSRKAARSR
NDGFSHQVYSSKATNFKGKGGQSLKSKQQEHSEQPTIGT*
back to top