prot_L-elsbetiae_contig611.14665.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig611.14665.1
Unique Nameprot_L-elsbetiae_contig611.14665.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length214
Homology
BLAST of mRNA_L-elsbetiae_contig611.14665.1 vs. uniprot
Match: D8LK28_ECTSI (VWFA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK28_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 4.930e-31
Identity = 76/159 (47.80%), Postives = 89/159 (55.97%), Query Frame = 0
Query:   58 AAALPEARTWMRKIDTNILNVDMAALSDEAPCATGDPTVCRGCQACLSAVSILTPVDIVGGS--SDAYDWACEYCHAVNRVVLDDMEKPVDGVLSVNHLIEGAPAAADKPDAGGAGXXXXXXXXXXXXTGTRKGKGKRSGKPKEDTSAVLFVIDTSDSM 214
            A A P +RTW RK+DTNILNVDMAAL + AP ATGD T+C  C+ACLSAVS+L PV    G+   D YDW CE+CH  NRV L   E PV G  SV++++E APA A                                    +D SAVLFVIDTS SM
Sbjct:  173 APAPPRSRTWTRKVDTNILNVDMAALGNAAPYATGDATICNDCRACLSAVSVLAPVSDDSGAVVEDVYDWTCEFCHKTNRVELGRGELPVVGQDSVDYVLEAAPATAAAXXX------------------------XXXXXXDQDESAVLFVIDTSGSM 307          
BLAST of mRNA_L-elsbetiae_contig611.14665.1 vs. uniprot
Match: A0A6T7CTJ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7CTJ1_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.690e-17
Identity = 56/148 (37.84%), Postives = 78/148 (52.70%), Query Frame = 0
Query:   67 WMRKIDTNILNVDMAALSDEAPCATGDPTVCRGCQACLSAVSILTPVDIVGGSSDAYDWACEYCHAVNRVVLDDMEKPVDGVLSVNHLIEGAPAAADKPDAGGAGXXXXXXXXXXXXTGTRKGKGKRSGKPKEDTSAVLFVIDTSDSM 214
            + RK+DTN++N+++  ++  A  ATG+   C GC AC S +S LT +     S D Y+W CE+C A   + LD+ E P  GV SV+++IE  PAAA +   GGAG                   G  +G        VLFV+DTS SM
Sbjct:  102 YHRKVDTNVMNINLGTITSTAAIATGEANECSGCGACASNLSTLTKLK---ASDDTYEWKCEFCGASQVLELDEAELPAAGVNSVDYIIE--PAAATEVGTGGAGGAVDA--------------GADAG------GLVLFVVDTSGSM 224          
BLAST of mRNA_L-elsbetiae_contig611.14665.1 vs. uniprot
Match: J9IES7_9SPIT (Type A von Willebrand factor domain-containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IES7_9SPIT)

HSP 1 Score: 63.9 bits (154), Expect = 2.650e-8
Identity = 33/95 (34.74%), Postives = 49/95 (51.58%), Query Frame = 0
Query:   65 RTWMRKIDTNILNVDMAALSDEAPCATGDPTVCRGCQACLSAVSILTPVDIVGGSSDAYDWACEYCHAVNRVVLDDMEKPVDGVLSVNHLIEGAP 159
            R + +++DTN+  + M  L + A  ATGDP  C GCQA  +  S +          D   W CE+C+  N + L+  E P     +VN++IE AP
Sbjct:  265 RKYKQEVDTNVFQISMKCLKENAEIATGDPVYCEGCQAMFNKHSQIEK------DGDKQVWICEFCNHKNNIQLEQEEIPKTD--TVNYIIEAAP 351          
BLAST of mRNA_L-elsbetiae_contig611.14665.1 vs. uniprot
Match: A0A8J8P035_HALGN (VWFA domain-containing protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8P035_HALGN)

HSP 1 Score: 60.5 bits (145), Expect = 3.630e-7
Identity = 42/149 (28.19%), Postives = 69/149 (46.31%), Query Frame = 0
Query:   67 WMRKIDTNILNVDMAALSDEAP-CATGDPTVCRGCQACLSAVSILTPVDIVGGSSDAYDWACEYCHAVNRVVLDDMEKPVDGVLSVNHLIEGAPAAADKPDAGGAGXXXXXXXXXXXXTGTRKGKGKRSGKPKEDTSAVLFVIDTSDSM 214
            + +K+DTN+  V MA L D+A   ATGDP  C  C   L+   + + + + G +     W CE+C+  N V ++  EKP    +S  +++E AP  ++                        K + K +G   +D S ++F +D S SM
Sbjct:   23 FRQKVDTNVFQVSMACLKDQATEIATGDPITCSACSGILN---VYSEIKVEGDAQQV--WICEFCNTRNVVNIEPEEKPKTDAVS--YILEAAPVKSE----------------------AEKKEEKTTGGVNKDIS-IVFCVDVSGSM 141          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig611.14665.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LK28_ECTSI4.930e-3147.80VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6T7CTJ1_9STRA1.690e-1737.84Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
J9IES7_9SPIT2.650e-834.74Type A von Willebrand factor domain-containing pro... [more]
A0A8J8P035_HALGN3.630e-728.19VWFA domain-containing protein n=1 Tax=Halteria gr... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig611contigL-elsbetiae_contig611:12041..14873 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig611.14665.1mRNA_L-elsbetiae_contig611.14665.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig611 11993..14873 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig611.14665.1 ID=prot_L-elsbetiae_contig611.14665.1|Name=mRNA_L-elsbetiae_contig611.14665.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=214bp
MNFGSKFALHDDSGEEQIVREEDMAAGPLGAPTPIPPAQAGDAVLPPAPP
QPRATGAAAALPEARTWMRKIDTNILNVDMAALSDEAPCATGDPTVCRGC
QACLSAVSILTPVDIVGGSSDAYDWACEYCHAVNRVVLDDMEKPVDGVLS
VNHLIEGAPAAADKPDAGGAGGAAASAATAAATTGTRKGKGKRSGKPKED
TSAVLFVIDTSDSM
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