prot_L-elsbetiae_contig611.14664.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig611.14664.1
Unique Nameprot_L-elsbetiae_contig611.14664.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length643
Homology
BLAST of mRNA_L-elsbetiae_contig611.14664.1 vs. uniprot
Match: D8LRA9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRA9_ECTSI)

HSP 1 Score: 411 bits (1057), Expect = 3.540e-132
Identity = 245/315 (77.78%), Postives = 257/315 (81.59%), Query Frame = 0
Query:  125 STMPAWMTHPDAPGGLQESGNSSGTGGRGGHRSTAEKSPPRFTRSSGPLPPEPTMANGGIAGXXXXXXXRGWTSNGGRHYXXXXXXXXXXXXXXXXXEPEKLPAVYSVHKGEVVKTETFGAFVKLDGYRKHGLVHCSQMASYRVEDVTDICKEGDTVYAKVIEVTDGAEPREQRIALSMKLVNQADGADLDPSNAEAETDVQRRKPMGG-DRAPVKLEAVFNTTCTKCGVQGHLSIDCFSRGGKKYDLVDEEDPRGASAMAANGG-GGGMRGVHREAPRDGVPAAGRGRGREATMPAWMTAAGLADKLRKKSHRK 437
            ST+PAWMTHP  PGGLQES      G RG  R + +KSPPRF RS+GPLPPEPTMANGGI G  XXXXX           XXXXXXXXXXXXXXXXX PEKLP V+SVHKGEVVKTETFGAF+KLDGYRKHGLVHCSQMASYRVEDVTD+CK GDTVYAKVIEVTDGA+PREQRIALSMKLVNQADG DLDPSNAEAETD QR++P GG DRAPV+LEAVFNTTCTKCGV GHLSIDCFSRGGKKY+LVDEEDPR      A GG G GMRGVHRE P  G   AG GRGR ATMPAWM   GL DKL KKSHRK
Sbjct:  142 STIPAWMTHPGGPGGLQESDR----GDRGDGRPSKDKSPPRFARSAGPLPPEPTMANGGITGGRXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXPEKLPEVFSVHKGEVVKTETFGAFIKLDGYRKHGLVHCSQMASYRVEDVTDVCKVGDTVYAKVIEVTDGADPREQRIALSMKLVNQADGKDLDPSNAEAETDAQRKRPAGGGDRAPVQLEAVFNTTCTKCGVHGHLSIDCFSRGGKKYELVDEEDPRDNGRGGAGGGTGNGMRGVHREPPHGGGALAG-GRGRGATMPAWMNDLGLVDKLNKKSHRK 446          
BLAST of mRNA_L-elsbetiae_contig611.14664.1 vs. uniprot
Match: A0A835YH79_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH79_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.550e-42
Identity = 109/282 (38.65%), Postives = 143/282 (50.71%), Query Frame = 0
Query:  224 EKLPAVYSVHKGEVVKTETFGAFVKLDGYRKHGLVHCSQMASYRVEDVTDICKEGDTVYAK------------------------------------VIEVTDGAEPREQRIALSMKLVNQADGADLDPSNAEAETDVQRRKPMGGDR-------------APVKLEAVFNTTCTKCGVQG-------------------HLSIDCFSRGGKKYDLVDEEDPRGASAMAANGGGGGMRGVHREAPRDGVPAAGRGRGREATMPAWMTAAGLADKLRKKSHRK 437
            + LPA+YSVH GEV   + FG FV   G+RKHGLVH SQ+A YRVEDV D    GD V+ K                                    VI+V +GA PRE ++A+SMKLV+Q+ G DLDP+N EA+ +  RR   GG R              P++L AVFNT C+KCG                      H+S+DCFSRGG+KY+LV E+   G  A       GGM+GV +  P    P+   GRG+ AT+P+WMT+    +    K+ +K
Sbjct:  283 DTLPALYSVHHGEVASVQDFGCFVSAPGHRKHGLVHKSQLAQYRVEDVADAVAVGDKVWVKYQXXXXXXXXXXXXXXXXXXKGGXXXXXXXXXXXXKVIDVQEGATPRESKVAMSMKLVDQSTGKDLDPTNEEAQDEAARRMGGGGXRXXXXXXXXXXAPKGPIELGAVFNTVCSKCGAXXXXXXXXXXXXXXXXXXXXXHMSVDCFSRGGQKYELVTEDLEGGEPA-------GGMKGVAKP-PDVPPPSVSMGRGKAATLPSWMTSGPAVEVDVPKAEKK 556          
BLAST of mRNA_L-elsbetiae_contig611.14664.1 vs. uniprot
Match: UPI001ED8BBBA (nucleolar protein of 40 kDa-like n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8BBBA)

HSP 1 Score: 150 bits (380), Expect = 9.160e-38
Identity = 78/150 (52.00%), Postives = 104/150 (69.33%), Query Frame = 0
Query:  229 VYSVHKGEVVKTETFGAFVKLDGYRKHGLVHCSQMASYRVEDVTDICKEGDTVYAKVIEVTDGAEPREQRIALSMKLVNQADGADLDPSNAEAETDVQRRKP-MGGDRAPVKLEAVFNTTCTKCGVQGHLSIDCF-SRGGKKYDLVDEED 376
            V ++  GEV   +++GAFV++ G  K GL+H SQ++S  V+DV+D+   GD VY KVI VTDG      +IALSMKLVNQ  G DLDP+  + + D  RRK  + G R  ++LEAVFNTTC+KCG +GH++ DCF S GGK Y+L+ EED
Sbjct:    8 VNTIFIGEVATVQSYGAFVRIPGISKQGLIHRSQVSSAPVDDVSDVLNRGDRVYCKVISVTDG------KIALSMKLVNQGSGKDLDPNGVQLQKDELRRKTFVPGTRKKIELEAVFNTTCSKCGTRGHMARDCFKSPGGKIYELLPEED 151          
BLAST of mRNA_L-elsbetiae_contig611.14664.1 vs. uniprot
Match: A0A1S3Q0U9_SALSA (nucleolar protein of 40 kDa n=11 Tax=Protacanthopterygii TaxID=41705 RepID=A0A1S3Q0U9_SALSA)

HSP 1 Score: 149 bits (377), Expect = 2.460e-37
Identity = 77/153 (50.33%), Postives = 103/153 (67.32%), Query Frame = 0
Query:  226 LPAVYSVHKGEVVKTETFGAFVKLDGYRKHGLVHCSQMASYRVEDVTDICKEGDTVYAKVIEVTDGAEPREQRIALS--MKLVNQADGADLDPSNAEAETDVQRRKPM-GGDRAPVKLEAVFNTTCTKCGVQGHLSIDCFSRGGKKYDLVDEE 375
            LPA+YS+ KGEV   +T+GAF+K+ GYRK GLVH S++++ RVE+V ++   G+ V+ KVI    G E R+ ++ LS  MK VNQ  G DLDP+N  AE D +RR+    G    + LEAV NTTC KCG +GH + DCFS  G +YDL+ EE
Sbjct:   17 LPAMYSIVKGEVASVQTYGAFIKIPGYRKQGLVHISELSACRVENVAEVVDVGEQVWIKVI----GREMRDDKVKLSFSMKAVNQGTGKDLDPNNVIAEQDERRRRQFKDGTGRRITLEAVLNTTCKKCGCKGHFAKDCFSAPGLQYDLIPEE 165          
BLAST of mRNA_L-elsbetiae_contig611.14664.1 vs. uniprot
Match: A0A3B4X9C6_SERLL (Zinc finger CCHC-type containing 17 n=2 Tax=Carangaria TaxID=1489904 RepID=A0A3B4X9C6_SERLL)

HSP 1 Score: 147 bits (371), Expect = 3.970e-37
Identity = 80/156 (51.28%), Postives = 105/156 (67.31%), Query Frame = 0
Query:  226 LPAVYSVHKGEVVKTETFGAFVKLDGYRKHGLVHCSQMASYRVEDVTDICKEGDTVYAKVIEVTDGAEPREQRIALS--MKLVNQADGADLDPSNAEAETDVQRRKPMG---GDRAPVKLEAVFNTTCTKCGVQGHLSIDCFSRGGKKYDLVDEED 376
            LP +YS+ KGEVV  +T+GAFV+L GY+K GLVH S+M++ RVE+ ++I   G+ V+ KVI    G E R  ++ LS  MK VNQ  G DLDP+N  AE D +RRK      G+R  + LEAV NTTC+KCG +GH + DCFS  G +Y L+ EED
Sbjct:   16 LPPLYSISKGEVVSVQTYGAFVRLPGYKKEGLVHVSEMSATRVENASEIVDVGEQVWIKVI----GKEIRGDKVKLSFSMKAVNQGTGRDLDPNNVMAEQDARRRKQFRDQTGNR--ITLEAVLNTTCSKCGCKGHFTKDCFSAPGLQYALLPEED 165          
BLAST of mRNA_L-elsbetiae_contig611.14664.1 vs. uniprot
Match: A0A1A7YY55_9TELE (Zinc finger, CCHC domain containing 17 n=2 Tax=Nothobranchiidae TaxID=405002 RepID=A0A1A7YY55_9TELE)

HSP 1 Score: 147 bits (370), Expect = 3.980e-37
Identity = 79/155 (50.97%), Postives = 105/155 (67.74%), Query Frame = 0
Query:  226 LPAVYSVHKGEVVKTETFGAFVKLDGYRKHGLVHCSQMASYRVEDVTDICKEGDTVYAKVIEVTDGAEPREQRIALS--MKLVNQADGADLDPSNAEAETDVQRRKPM---GGDRAPVKLEAVFNTTCTKCGVQGHLSIDCFSRGGKKYDLVDEE 375
            LP +YS+ KGEVV  +T+GAFV+L GYRK GLVH S+M++ RVE  ++I   G+ V+ KVI    G E + +++ LS  MK VNQ  G DLDP+N +AE D +RR+     G +R  + LEAV NTTC+KCG +GH + DCFS  G +Y LV EE
Sbjct:   17 LPPMYSIAKGEVVSVQTYGAFVRLPGYRKEGLVHVSEMSATRVESASEIVDVGEQVWIKVI----GREIQGEKVKLSFSMKAVNQGTGRDLDPNNVQAEQDARRRRQFRDQGSNR--ITLEAVLNTTCSKCGCKGHFTKDCFSAPGLQYALVPEE 165          
BLAST of mRNA_L-elsbetiae_contig611.14664.1 vs. uniprot
Match: UPI001404228E (nucleolar protein of 40 kDa isoform X1 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001404228E)

HSP 1 Score: 149 bits (377), Expect = 4.620e-37
Identity = 83/165 (50.30%), Postives = 107/165 (64.85%), Query Frame = 0
Query:  224 EKLPAVYSVHKGEVVKTETFGAFVKLDGYRKHGLVHCSQMASYRVEDVTDICKEGDTVYAKVIEVTDGAEPREQRIALSMKLVNQADGADLDPSNAEAETDVQRRKPM---GGDRAPVKLEAVFNTTCTKCGVQGHLSIDCFS-RGGKKYDLV--DEEDPRGASA 382
            E LP +YS+ +GEV     +GAFVKL G RKHGLVH S M S RVE+  ++   G+ V+ KVI + D  + +  +IALSMK+VNQ  G DLDPSN   E D +R++       DR  ++L AV +TTC+KCG +GH + DCFS  GG KYDL+  D ED R ASA
Sbjct:    2 EALPELYSIIQGEVASVREYGAFVKLPGLRKHGLVHVSHMCSTRVENPAEVVDVGEKVWCKVISLEDKDDGKGMKIALSMKVVNQGTGKDLDPSNLGLEQDERRKRKFRDFSADR--IQLGAVLSTTCSKCGCKGHFAKDCFSVPGGTKYDLIPDDVEDVRAASA 164          
BLAST of mRNA_L-elsbetiae_contig611.14664.1 vs. uniprot
Match: A0A3P8WCJ4_CYNSE (Zinc finger CCHC-type containing 17 n=3 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8WCJ4_CYNSE)

HSP 1 Score: 148 bits (373), Expect = 5.160e-37
Identity = 78/158 (49.37%), Postives = 103/158 (65.19%), Query Frame = 0
Query:  224 EKLPAVYSVHKGEVVKTETFGAFVKLDGYRKHGLVHCSQMASYRVEDVTDICKEGDTVYAKVIEVTDGAEPREQRIALS--MKLVNQADGADLDPSNAEAETDVQRRKPMGGDRA-PVKLEAVFNTTCTKCGVQGHLSIDCFSRGGKKYDLVDEEDPR 378
            E LP +YS+ KGEVV  +T+GAFV+L GYRK GLVH S+M++ RVE  ++I   G+ V+ KVI    G E R  ++ +S  MK VNQ  G DLDP+N  AE D +RR+         + LEAV NTTC+KCG +GH + DCFS  G +Y L+ EED +
Sbjct:   16 EGLPPIYSILKGEVVSVQTYGAFVRLPGYRKEGLVHVSEMSASRVEKASEIVDVGEQVWIKVI----GREIRGDKVKMSFSMKAVNQGTGRDLDPNNVNAEQDARRRRQFRDQTGNKITLEAVLNTTCSKCGCKGHFTKDCFSAPGLQYALLPEEDDK 169          
BLAST of mRNA_L-elsbetiae_contig611.14664.1 vs. uniprot
Match: A0A7S2TF11_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S2TF11_9EUKA)

HSP 1 Score: 148 bits (374), Expect = 7.550e-37
Identity = 73/158 (46.20%), Postives = 105/158 (66.46%), Query Frame = 0
Query:  223 PEKLPAVYSVHKGEVVKTETFGAFVKLDGYRKHGLVHCSQMASYRVEDVTDICKEGDTVYAKVIEVT-DGAEPREQRIALSMKLVNQADGADLDPSNAEAETDVQRRKPMGGDRAPVKLEAVFNTTCTKCGVQGHLSIDCFSRGGKKYDLVDEEDPRG 379
            P++ P +YSVH+G VV    +GAFVKLDG+   GLVH SQ+A+++V++ TD+   G  V+ KV+    D  +   ++++LSMKLV+Q DG DLD SN EAE    R +    D   ++L A++NT CTKCG  GHL+  CF+  GKKYDL++++D  G
Sbjct:  112 PDEYPKMYSVHQGNVVSVRDYGAFVKLDGFYAQGLVHVSQLAAWKVDNPTDVVNVGQRVWVKVVACEPDPKKEGRKKVSLSMKLVSQEDGEDLDKSNIEAEQLTDRARYQQQDAKRIELGAIYNTICTKCGGHGHLATQCFT--GKKYDLIEDDDKDG 267          
BLAST of mRNA_L-elsbetiae_contig611.14664.1 vs. uniprot
Match: A0A3B4XKM9_SERLL (Zinc finger CCHC-type containing 17 n=4 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3B4XKM9_SERLL)

HSP 1 Score: 147 bits (371), Expect = 9.520e-37
Identity = 80/156 (51.28%), Postives = 105/156 (67.31%), Query Frame = 0
Query:  226 LPAVYSVHKGEVVKTETFGAFVKLDGYRKHGLVHCSQMASYRVEDVTDICKEGDTVYAKVIEVTDGAEPREQRIALS--MKLVNQADGADLDPSNAEAETDVQRRKPMG---GDRAPVKLEAVFNTTCTKCGVQGHLSIDCFSRGGKKYDLVDEED 376
            LP +YS+ KGEVV  +T+GAFV+L GY+K GLVH S+M++ RVE+ ++I   G+ V+ KVI    G E R  ++ LS  MK VNQ  G DLDP+N  AE D +RRK      G+R  + LEAV NTTC+KCG +GH + DCFS  G +Y L+ EED
Sbjct:   15 LPPLYSISKGEVVSVQTYGAFVRLPGYKKEGLVHVSEMSATRVENASEIVDVGEQVWIKVI----GKEIRGDKVKLSFSMKAVNQGTGRDLDPNNVMAEQDARRRKQFRDQTGNR--ITLEAVLNTTCSKCGCKGHFTKDCFSAPGLQYALLPEED 164          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig611.14664.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRA9_ECTSI3.540e-13277.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YH79_9STRA1.550e-4238.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI001ED8BBBA9.160e-3852.00nucleolar protein of 40 kDa-like n=1 Tax=Ischnura ... [more]
A0A1S3Q0U9_SALSA2.460e-3750.33nucleolar protein of 40 kDa n=11 Tax=Protacanthopt... [more]
A0A3B4X9C6_SERLL3.970e-3751.28Zinc finger CCHC-type containing 17 n=2 Tax=Carang... [more]
A0A1A7YY55_9TELE3.980e-3750.97Zinc finger, CCHC domain containing 17 n=2 Tax=Not... [more]
UPI001404228E4.620e-3750.30nucleolar protein of 40 kDa isoform X1 n=2 Tax=Pet... [more]
A0A3P8WCJ4_CYNSE5.160e-3749.37Zinc finger CCHC-type containing 17 n=3 Tax=Cynogl... [more]
A0A7S2TF11_9EUKA7.550e-3746.20Hypothetical protein (Fragment) n=2 Tax=Lotharella... [more]
A0A3B4XKM9_SERLL9.520e-3751.28Zinc finger CCHC-type containing 17 n=4 Tax=Percom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 228..304
e-value: 5.0E-14
score: 62.6
NoneNo IPR availableGENE3D2.40.50.140coord: 225..315
e-value: 2.3E-24
score: 87.3
NoneNo IPR availablePANTHERPTHR15838:SF1NUCLEOLAR PROTEIN OF 40 KDAcoord: 199..498
IPR003029S1 domainPFAMPF00575S1coord: 231..291
e-value: 1.8E-12
score: 47.4
IPR003029S1 domainPROSITEPS50126S1coord: 230..304
score: 15.701
IPR037320Nucleolar protein of 40kDaPANTHERPTHR15838FAMILY NOT NAMEDcoord: 199..498
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 348..361
score: 8.829
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 229..307

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig611contigL-elsbetiae_contig611:490..10323 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig611.14664.1mRNA_L-elsbetiae_contig611.14664.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig611 445..10478 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig611.14664.1 ID=prot_L-elsbetiae_contig611.14664.1|Name=mRNA_L-elsbetiae_contig611.14664.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=643bp
MTSGSATSSVGGLNDRGTHESNSHDNGRSRKGRSRSRSRSRDRRGGGGGG
GGGRDRRRSGSRDRRRSRSRSRHRSRERRNGGGKDNGGGSSAKGVAARAL
EQAFAGGGGGGGGMPPAGRGRGRGSTMPAWMTHPDAPGGLQESGNSSGTG
GRGGHRSTAEKSPPRFTRSSGPLPPEPTMANGGIAGGGGGGGGRGWTSNG
GRHYGRGGGGGGRGGGRGGGREPEKLPAVYSVHKGEVVKTETFGAFVKLD
GYRKHGLVHCSQMASYRVEDVTDICKEGDTVYAKVIEVTDGAEPREQRIA
LSMKLVNQADGADLDPSNAEAETDVQRRKPMGGDRAPVKLEAVFNTTCTK
CGVQGHLSIDCFSRGGKKYDLVDEEDPRGASAMAANGGGGGMRGVHREAP
RDGVPAAGRGRGREATMPAWMTAAGLADKLRKKSHRKDKKSKKKKSDRYD
GGSSSSDSESGSEDDGGGGSRKHKKKHHKKHKSSKHKSSKHKKSSHKHAS
SGRKRSSSRRDRRDSGGGSDSDSDEGGQVSMNGAGGEGRGGRGGERDNGS
SRKRSNSRNGRTGGRIGGGGGGGGGGRQGRSRSRSRGRGEAGGGRGRSRM
EDPDGRFADAPASAVVAAAAVGDGGRWQPRADSDRSDSRGSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022967S1_dom
IPR003029S1_domain
IPR037320pNO40
IPR001878Znf_CCHC
IPR012340NA-bd_OB-fold