prot_L-elsbetiae_contig6104.14654.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6104.14654.1
Unique Nameprot_L-elsbetiae_contig6104.14654.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length625
Homology
BLAST of mRNA_L-elsbetiae_contig6104.14654.1 vs. uniprot
Match: A0A6H5JB67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB67_9PHAE)

HSP 1 Score: 528 bits (1361), Expect = 5.030e-176
Identity = 323/563 (57.37%), Postives = 366/563 (65.01%), Query Frame = 0
Query:   24 SVKSRRKAAAAEVAERGILDKQSRGLHLEVRRAACVASTTFNEGDRVESRWRRPTRLDKPRLHLNAWHTGLVVQSHKDGARVDVVFEDGDGERLSGIPAKYVRLAP-LNSALRQPLVSPGVSDGDVGTAG----REFLDSS-SCTPTPIPVGLLCPASRRELAHIASANTSLRRAWEDPVPIGQELARLRMLGEEKLRARPEWQGSFPLLNFQSAKRLPLGASRTG-TGVRKV--TAAAAAAGVGARDLGRERHQ--AQGTPGGITTTRTRKLAAASLLAKPRMVTAQAGRGDEGFQQGQLYSIRTLVENDTS---TNRRGSSSSSSPLSPLSSP-------------------ALVESQAKLVAAAVAYDRCVAGARDCLHRGATAFRMARTYSEQQRAFEESTATLGPAQPARAGYTDWRGSAVVGLQSATLDVVEAMDSWAAEWVAARESKTRAGQDGGLDPGAGGGSNNAVEGEKVVEKDGVVAAAAATAPPFLWEGSPLVSTLIGHSAKLLADAPELKEWYGPGFATERNPFFLAYPIDDRPITPRSALVRAWVNGEM 553
            S KSR KA AA    +  L++QS+GLHLE++RA  VA+TTF EGDRVESRWRRPTRLDK ++   AWH G VVQSHK G RVDVVFEDGDGERLSGI  K+VRLAP         LVS G  D  V  AG    R   D   SC PTP P  L+C A RRELAHIA A  SLR  WE PVPI QE+ARLRML E K+R+RPEW+GSFPL++F + KRLP GA     T VRKV  TAA+A + V    L    HQ  AQ T    + TR R + ++   +    +T    + DE   +      R    +D +   TN R +    S                           AL+ +QAKLV+AAVAYDRCVAG RDCL RG  AFR+ARTYSEQQ+AFEESTATLGPAQPARAGY DWRGS VVGLQSATLDVVEAMD WAAEW  A+  KT AG           G +NA   E VV KDG V   A  APPFLWEGSPLVST+IG SAKL+A APELKEWYGPGF  ERNPFFLAYP+DDRP+TPRSALVRAWVNGE+
Sbjct:  230 SAKSRLKAMAA-ARHQETLEQQSQGLHLEMKRAMKVATTTFREGDRVESRWRRPTRLDKAKIDPGAWHPGRVVQSHKGGDRVDVVFEDGDGERLSGISTKHVRLAPPXXXXXXXXLVSSGRDDDYVTAAGVTGRRNSCDRRPSCAPTPAPTELVCSAIRRELAHIACATKSLRCTWEVPVPISQEMARLRMLEERKMRSRPEWRGSFPLVDFSATKRLPFGAGGMARTVVRKVKNTAASAVSAV----LATRDHQLQAQSTVRDDSRTRLRTVQSSPSSSLKMPMTVPQVQRDENDDRDLGQGDRCTSTDDNTVKETNARSAGKRRSSXXXXXXXXXXXXXXXXXXXXXXXXXTALLAAQAKLVSAAVAYDRCVAGVRDCLDRGCAAFRLARTYSEQQKAFEESTATLGPAQPARAGYKDWRGSPVVGLQSATLDVVEAMDDWAAEWAVAKGGKTDAG-----------GGDNAFAEEGVVLKDGAVEEVAVAAPPFLWEGSPLVSTVIGQSAKLVAGAPELKEWYGPGFPIERNPFFLAYPVDDRPVTPRSALVRAWVNGEV 776          
BLAST of mRNA_L-elsbetiae_contig6104.14654.1 vs. uniprot
Match: D8LCG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCG8_ECTSI)

HSP 1 Score: 520 bits (1340), Expect = 6.690e-172
Identity = 315/543 (58.01%), Postives = 359/543 (66.11%), Query Frame = 0
Query:   42 LDKQSRGLHLEVRRAACVASTTFNEGDRVESRWRRPTRLDKPRLHLNAWHTGLVVQSHKDGARVDVVFEDGDGERLSGIPAKYVRLAP-----------LNSALRQPLVSPGVSDGDVGTAGREFLDSSSCTPTPIPVG-LLCPASRRELAHIASANTSLRRAWEDPVPIGQELARLRMLGEEKLRARPEWQGSFPLLNFQSAKRLPLGA---SRTG-TGVRKVTAAAAAAGVGARDLGRERHQAQGTPGGITTTRTRKL--AAASLLAKPRMVTAQAGRGDEGFQQGQLYSIRTLVEN---DTSTNRRGSSSSSSPLSPL----------SSPALVESQAKLVAAAVAYDRCVAGARDCLHRGATAFRMARTYSEQQRAFEESTATLGPAQPARAGYTDWRGSAVVGLQSATLDVVEAMDSWAAEWVAARESKTRAGQDGGLDPGAGGGSNNAVEGEKVVEKDGVVAAAAATAPPFLWEGSPLVSTLIGHSAKLLADAPELKEWYGPGFATERNPFFLAYPIDDRPITPRSALVRAWVNGEM 553
            L++QSRGLHLE++RA  VA+TTF EGDRVESRWRRPTRLDK ++   AWH G VVQSHKDG RVDVVFEDGDGERLSGI  K+VRLAP                   +++ GVS G   +  R      SC PT  P   L+C ASR ELAHIA A   LR  WEDPVPI QE+ARLRML E K+R RPEW+GSFPL++F + KRLP GA   +RTG    R   A+AA A V  RD    + QAQGT    + TR R +  + +S L  P  V       +    QGQ     +  +N   +T+    G   SS                 + AL+E+QAKLV+AA+AYDR VAGARDCL RG  AFR+ARTYSEQQ+AFEESTA LGPAQPARAGYTDWRGS VVGLQSATLDVVEAMD+WAAEW A          D G  P  GGG N   E E VV KDG VA  A  APPFLWEGSPLVST+IG SAKL+A APELK WYGPGF  ERNPFFLAYP+DDRP+TPRSALVRAWVNGE+
Sbjct:  329 LEQQSRGLHLEMKRAMKVATTTFREGDRVESRWRRPTRLDKAKIDPGAWHPGRVVQSHKDGGRVDVVFEDGDGERLSGISTKHVRLAPPXXXXXXXXXXXXXXXXXXVMAAGVS-GRRNSCDRR----PSCVPTSAPTDELVCSASRGELAHIACATKFLRCTWEDPVPISQEMARLRMLEERKMRGRPEWRGSFPLVDFSATKRLPFGAGGMARTGGRRARNAAASAATAAVATRD---RQLQAQGTVHDDSRTRLRTVQWSPSSSLKMPTTVPQVHREENIDRDQGQGDRCTSTDDNTVKETNARSAGKRRSSXXXXXXXXXXXXXXXXGATALLEAQAKLVSAALAYDRYVAGARDCLDRGCAAFRLARTYSEQQKAFEESTAILGPAQPARAGYTDWRGSPVVGLQSATLDVVEAMDAWAAEWAA----------DKGGKPDTGGGGNAFAE-EGVVLKDGAVAEVAVAAPPFLWEGSPLVSTIIGQSAKLVAGAPELKGWYGPGFPIERNPFFLAYPVDDRPVTPRSALVRAWVNGEV 852          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6104.14654.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JB67_9PHAE5.030e-17657.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCG8_ECTSI6.690e-17258.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6104contigL-elsbetiae_contig6104:5790..8007 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6104.14654.1mRNA_L-elsbetiae_contig6104.14654.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6104 5790..8007 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6104.14654.1 ID=prot_L-elsbetiae_contig6104.14654.1|Name=mRNA_L-elsbetiae_contig6104.14654.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=625bp
GAEKRPRGGQRRPVTSKTASRRASVKSRRKAAAAEVAERGILDKQSRGLH
LEVRRAACVASTTFNEGDRVESRWRRPTRLDKPRLHLNAWHTGLVVQSHK
DGARVDVVFEDGDGERLSGIPAKYVRLAPLNSALRQPLVSPGVSDGDVGT
AGREFLDSSSCTPTPIPVGLLCPASRRELAHIASANTSLRRAWEDPVPIG
QELARLRMLGEEKLRARPEWQGSFPLLNFQSAKRLPLGASRTGTGVRKVT
AAAAAAGVGARDLGRERHQAQGTPGGITTTRTRKLAAASLLAKPRMVTAQ
AGRGDEGFQQGQLYSIRTLVENDTSTNRRGSSSSSSPLSPLSSPALVESQ
AKLVAAAVAYDRCVAGARDCLHRGATAFRMARTYSEQQRAFEESTATLGP
AQPARAGYTDWRGSAVVGLQSATLDVVEAMDSWAAEWVAARESKTRAGQD
GGLDPGAGGGSNNAVEGEKVVEKDGVVAAAAATAPPFLWEGSPLVSTLIG
HSAKLLADAPELKEWYGPGFATERNPFFLAYPIDDRPITPRSALVRAWVN
GEMVTTVSRMLLEEREKEEAALEAIVDKQASAPSWWPASRGGMGGESHFQ
RIRRAEKIIAREELQVVEGRGLPSS
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