prot_L-elsbetiae_contig61.14643.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig61.14643.1
Unique Nameprot_L-elsbetiae_contig61.14643.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length333
Homology
BLAST of mRNA_L-elsbetiae_contig61.14643.1 vs. uniprot
Match: D7G4S1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4S1_ECTSI)

HSP 1 Score: 494 bits (1272), Expect = 7.270e-174
Identity = 266/338 (78.70%), Postives = 289/338 (85.50%), Query Frame = 0
Query:    1 MLWKLNYATAAVGWMLTRLQAEAFSVVGFQKLSNPKHVAALPSPASTSSTPRTSAT------SAWRPPSLGFLPLHMSTGGDAVESSLGTTSEERSVLDALIDQFTSPKSGNVTATVEEYLDLCDHAFLTHLRRRIEAEETPPPTATALKRVEEEINMAMQRRLAAADSNLRQVLDLAPDIKKMEGSIRTMFRQGEVNMAFMVMISMNLQRAKEAEGADNAVMLLTHLTTFIMMLQDERLNPEEKLLRVLLRTDCDGVRKSMLREQLQLPNHDIFLETSPDKDKVQPHLLQQAITDMITQVEDIGQAIDVGMTESLKGLQVELEGVVAGSKRPGPYKQ 332
            M+ K NY +A VGW+L R QAEAFSVVGFQK        A  + A  SS P +S T      +A R PS G LP+HM  GGDAV+SS+GT SEE SVLDALIDQFTSPKSGNVTATVEEYLDLCDHA LTHLR RIEAEE   P ATALK VEEEINMAMQRRLAAADSNLRQVLDLAPDIKKMEG IRT+FR+G+VNMAFMVMISMNLQRAK+AEGAD+AVMLLTHLTTFIMM+QDERLNPEEKLLR LLRTDCDGVRKS+L+++LQLPN+D+FLE  PDKDKVQPHLLQQAITDMITQVEDIGQAIDVGMT+SLKGLQVE+  VVAGSKRPGPYKQ
Sbjct:    1 MILKWNYVSATVGWLLARRQAEAFSVVGFQK----PQATACRTRALASSVPASSPTQRILDAAALRGPSRGLLPMHMLAGGDAVQSSVGTKSEEHSVLDALIDQFTSPKSGNVTATVEEYLDLCDHALLTHLRGRIEAEEAQSPEATALKHVEEEINMAMQRRLAAADSNLRQVLDLAPDIKKMEGRIRTLFREGKVNMAFMVMISMNLQRAKDAEGADHAVMLLTHLTTFIMMIQDERLNPEEKLLRTLLRTDCDGVRKSILQDRLQLPNNDVFLERPPDKDKVQPHLLQQAITDMITQVEDIGQAIDVGMTDSLKGLQVEVNTVVAGSKRPGPYKQ 334          
BLAST of mRNA_L-elsbetiae_contig61.14643.1 vs. uniprot
Match: A0A835YR16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR16_9STRA)

HSP 1 Score: 156 bits (395), Expect = 8.290e-43
Identity = 95/215 (44.19%), Postives = 134/215 (62.33%), Query Frame = 0
Query:  117 LCDHAFLTHLRRRIEAEETPPPTATALKRVEEEINMAMQRRLAAADSNLRQVLDLAPDIKKMEGSIRTMFRQGEVNMAFMVMISMNLQRAKEA-EGADNAVMLLTHLTTFIMMLQDERLNPEEKLLRVLLRTDCDG---VRKSMLREQLQLPNHDIFLETSPDKDKVQPHLLQQAITDM---ITQVEDIGQAIDVGMTESLKGLQVELEGVVAGS 324
            +CD+ FL +L  RI          T L  V +EIN+AMQRRL AAD+NLR VL  APD+KKME  +R +FR G+ +MAFMV+++MNL +A+EA  GA+ AV +LTHL T IM +QD R+ PE +LLR+L+R   D     R+ +L+EQL L         +     V P  L+ AI ++    TQ+E + +  D G+TE L+GL  E++ V+ G+
Sbjct:    1 MCDYGFLMYLNGRIGEAGPDSEEGTKLSAVAQEINVAMQRRLVAADANLRAVLANAPDLKKMEADLRRLFRTGQADMAFMVVLNMNLAQAREAGPGAEGAVAVLTHLNTAIMEMQDTRVAPEVRLLRMLMRASDDDNAEKRRDLLKEQLDLSGGG----GADSSGLVTPDQLRDAIRELQEQATQIEKVSKEYDTGLTEKLRGLLREIDEVLMGT 211          
BLAST of mRNA_L-elsbetiae_contig61.14643.1 vs. uniprot
Match: D7FSF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF0_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 4.090e-13
Identity = 72/243 (29.63%), Postives = 129/243 (53.09%), Query Frame = 0
Query:   83 GTTSEERSVLDALIDQFTSPKSG-NVTATVEEYLDLCDHAFLTHLRRRI-EAEETPPPTATALKRVEEEINMAMQRRLAAADSNLRQVLDLAPDIKKMEGSIRTMFRQGEVNMAFMVMISMNLQRAKEAEGADNAVMLLTHLTTFIMMLQDERLNPEEKLLRVLLRTDCDGVRKSMLREQLQLPNHDIFL---ETSPDKDKVQPHLLQQAITDMITQVEDIGQAIDVGMTESLKGLQVELEGV 320
            G  ++ R+  + L+ +  + + G ++   VE   D  D  FLT L ++  EAE T    A AL R+ + IN  MQRR+A A   L+++L +  + ++ME +I+ M  +GEV+ A ++++  NLQ+A+EA+ A  AV +L  L        DE+++PE++L+R LLR      R ++L +  +     +     ETS   D   P  ++  +  +I    ++G++ ++G  + L  +  E E V
Sbjct:   35 GLPTKVRAGYENLLGKLLNREDGESLEDAVETNYDQVDIQFLTLLNQKAQEAEGTD--AAAALTRLGDSINNTMQRRMAQASERLQKILTVG-NPERMEETIKAMAERGEVDDALVLLLQANLQQAEEAD-AGPAVGVLKRLGAAAQAALDEKVDPEKRLVRQLLRAKDREARLNILTKAFRQRAKVVLADGSETSEAPDVAPPKFIE-TVKGIIRNFGNVGES-ELGFAQQLDDMISEAEQV 271          
BLAST of mRNA_L-elsbetiae_contig61.14643.1 vs. uniprot
Match: A0A0M8KBP5_9CHLR (CpXC domain-containing protein n=2 Tax=Ardenticatenia TaxID=1382928 RepID=A0A0M8KBP5_9CHLR)

HSP 1 Score: 63.2 bits (152), Expect = 2.110e-7
Identity = 61/211 (28.91%), Postives = 103/211 (48.82%), Query Frame = 0
Query:   91 VLDALIDQFTSPKSGNVTATVEEYLDLCDHAFLTHLRRRIEAEETPPPTAT------ALKRVEEEINMAMQRRLAAADSNLRQVLDLAPDIKKMEGSIRTMFRQGEVNMAFMVMISMNLQRAKEAEGADNAVMLLTHLTTFIMMLQDERLNPEEKLLRVLLRTDCDGVRKSMLREQLQL--PNHDI-FLET---SPDKDKVQPHLLQQAIT 289
            + D ++        G + A V     + D+ F  HL  +IE+  +    A       AL ++ +E++   ++ +  A   L ++L  A DI K   ++   F+  +++ AF+V++S NLQ AKE +  D A  L+  +   ++ L + RL PE +L+  LLRT     R ++LR   Q   P+H I  LET     ++  V P +LQQ  T
Sbjct:  227 MYDDVLAMLREADPGRLQALVAANRPILDYGFFLHLTEKIESATSEEERAELLTLRDALVKLTDEMDAEAKQAVERAARQLEEILQ-AEDIDK---AVEERFQ--DLDEAFLVLLSANLQAAKEQKREDVAA-LMERIYQKVVSLAESRLPPEMQLINQLLRTPSAEERAALLRNAFQTYPPDHLINLLETLFHDAEQQGVTPRVLQQIET 430          
BLAST of mRNA_L-elsbetiae_contig61.14643.1 vs. uniprot
Match: A0A3D0CYW3_9CHLR (CpXC domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3D0CYW3_9CHLR)

HSP 1 Score: 55.8 bits (133), Expect = 5.300e-5
Identity = 63/246 (25.61%), Postives = 110/246 (44.72%), Query Frame = 0
Query:   92 LDALIDQFTSPKSGNVTATVEEYLDLCDHAFLTHLRRRIEAEETPPPTA-----TALKRVEEEINMAMQRRLAAADSNLRQVLDLAPDIKKMEGSIRTMFRQGEVNMAFMVMISMNLQRAKEAEGADNAVMLLTHLTTFIMMLQDERLNPEEKLLRVLLRTDCDGVRKSMLREQLQLPNHDIFLETSPDKDKVQPHLLQQAITDMITQVEDIGQAIDVGMTESLKGLQVELEGVVAGSKRPGPYKQ 332
             D LID         + + V     L D++F  HL  +++        A     + L  + +E++   +  +  A + L  +L  A D   M+ +I    R  E++ AF+V++S N+Q A+E +  D  V +LT +   I+     RL PE +L+  LL+T     R+++L+E LQ  N   FLE            L Q+I D +       Q     +  +L+ ++ E++  V G+  P   +Q
Sbjct:  227 FDELIDTLRHLPPERLHSAVAANRPLLDYSFFLHLSSKLDEATGEERAALESLRSRLVALTDEMDQQAKEAMERASAQLSGILQ-ADD---MDAAIEE--RIDELDEAFLVVLSANIQAAQEQKRED-VVEVLTRIYHDIITRLQARLRPELQLINQLLQTTDLAERRALLQEALQTYNPAGFLE------------LLQSIADDVE-----AQGAGENLVAALRQIEDEVQVAVEGTSSPARGRQ 448          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig61.14643.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G4S1_ECTSI7.270e-17478.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YR16_9STRA8.290e-4344.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FSF0_ECTSI4.090e-1329.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0M8KBP5_9CHLR2.110e-728.91CpXC domain-containing protein n=2 Tax=Ardenticate... [more]
A0A3D0CYW3_9CHLR5.300e-525.61CpXC domain-containing protein n=1 Tax=Chloroflexi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..332
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig61contigL-elsbetiae_contig61:25229..28386 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig61.14643.1mRNA_L-elsbetiae_contig61.14643.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig61 25229..28386 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig61.14643.1 ID=prot_L-elsbetiae_contig61.14643.1|Name=mRNA_L-elsbetiae_contig61.14643.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=333bp
MLWKLNYATAAVGWMLTRLQAEAFSVVGFQKLSNPKHVAALPSPASTSST
PRTSATSAWRPPSLGFLPLHMSTGGDAVESSLGTTSEERSVLDALIDQFT
SPKSGNVTATVEEYLDLCDHAFLTHLRRRIEAEETPPPTATALKRVEEEI
NMAMQRRLAAADSNLRQVLDLAPDIKKMEGSIRTMFRQGEVNMAFMVMIS
MNLQRAKEAEGADNAVMLLTHLTTFIMMLQDERLNPEEKLLRVLLRTDCD
GVRKSMLREQLQLPNHDIFLETSPDKDKVQPHLLQQAITDMITQVEDIGQ
AIDVGMTESLKGLQVELEGVVAGSKRPGPYKQ*
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