prot_L-elsbetiae_contig609.14627.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig609.14627.1
Unique Name	prot_L-elsbetiae_contig609.14627.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	196

Homology

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BLAST of mRNA_L-elsbetiae_contig609.14627.1 vs. uniprot
Match: D7FJC7_ECTSI (Rab5, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJC7_ECTSI)

HSP 1 Score: 382 bits (980), Expect = 6.330e-134
Identity = 192/195 (98.46%), Postives = 193/195 (98.97%), Query Frame = 0

Query:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRPRTEPKSGCC 195
            MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEAR YAEDNGLIHMETSAKSAQNVK+IFVEIAQKLPKATVQPEREAFPIMRPRTE KSGCC
Sbjct:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEQKSGCC 195

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BLAST of mRNA_L-elsbetiae_contig609.14627.1 vs. uniprot
Match: A0A835Z7I1_9STRA (Rab5, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7I1_9STRA)

HSP 1 Score: 331 bits (848), Expect = 8.090e-114
Identity = 166/191 (86.91%), Postives = 177/191 (92.67%), Query Frame = 0

Query:    5 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRPRTEPKSGCC 195
            RVCHFKLVLLGDTAVGKSCLVVRFVR+EFFE+QEPTIGAAFLTQ V LDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK+SFNGAKSWVKELQRRGDPNV+IALAGNKADLE RRQV  EEA  YAE+NG+IHMETSAKSA NVK+IFVEIA++LPKA  QPEREAFPIM PR + K+G C
Sbjct:    3 RVCHFKLVLLGDTAVGKSCLVVRFVRNEFFEFQEPTIGAAFLTQTVGLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFNGAKSWVKELQRRGDPNVVIALAGNKADLEGRRQVHFEEAHAYAEENGIIHMETSAKSALNVKSIFVEIAKRLPKAGAQPEREAFPIMPPRRDKKAGGC 193

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BLAST of mRNA_L-elsbetiae_contig609.14627.1 vs. uniprot
Match: F0YJN1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJN1_AURAN)

HSP 1 Score: 327 bits (837), Expect = 3.980e-112
Identity = 158/195 (81.03%), Postives = 181/195 (92.82%), Query Frame = 0

Query:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRPRTEPKSGCC 195
            M+SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V L++ATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYD+TNKESFNGAKSWVKELQRRGDPNVIIALAGNKADL+++R+V+SEEA+QY+E+NG++HMETSAK+A +VK++F EIA+KLPK   QPER+AFPI+ P+      CC
Sbjct:    1 MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQSVNLENATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLQNKRRVESEEAKQYSEENGILHMETSAKNATHVKDLFQEIARKLPKTPPQPERDAFPIIPPKHNENKVCC 195

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BLAST of mRNA_L-elsbetiae_contig609.14627.1 vs. uniprot
Match: A0A6V1MPB5_HETAK (Hypothetical protein n=2 Tax=Chattonellaceae TaxID=658124 RepID=A0A6V1MPB5_HETAK)

HSP 1 Score: 322 bits (825), Expect = 2.590e-110
Identity = 163/195 (83.59%), Postives = 174/195 (89.23%), Query Frame = 0

Query:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRPRTEPKSGCC 195
            M+SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQ V L +ATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK+SFNGAKSWVKELQRRGDPNV+IALAGNK DLE RRQV  EEA  YA +NG+IHMETSAKSA NV+ IF++IA+KLPK   Q ERE FPIM P+ E K GCC
Sbjct:    1 MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQTVSLPEATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFNGAKSWVKELQRRGDPNVVIALAGNKCDLEPRRQVPFEEAAAYAAENGIIHMETSAKSAHNVQQIFLDIAKKLPKNPPQVEREVFPIMPPKRESK-GCC 194

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BLAST of mRNA_L-elsbetiae_contig609.14627.1 vs. uniprot
Match: A0A7S1ZIQ9_TRICV (Hypothetical protein n=3 Tax=Mediophyceae TaxID=589449 RepID=A0A7S1ZIQ9_TRICV)

HSP 1 Score: 318 bits (814), Expect = 5.270e-108
Identity = 156/192 (81.25%), Postives = 174/192 (90.62%), Query Frame = 0

Query:    3 SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRPRTEPKSGC 194
            S RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LD+ATVKFEIWDTAGQERYRSLAPMYYRGAAAAI+VYD+TN +SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+ EEA  YAE+NG++H+ETSAK+A NVK +FVEIA+KLPK   QPEREAFPI+ P+ E +S C
Sbjct:   45 SNRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDEATVKFEIWDTAGQERYRSLAPMYYRGAAAAIIVYDITNPDSFAGAKSWVKELQRRGDPNVVIALAGNKADLESRRKVEFEEANAYAEENGILHLETSAKNASNVKALFVEIAKKLPKTPPQPEREAFPIVTPKQENRSCC 236

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BLAST of mRNA_L-elsbetiae_contig609.14627.1 vs. uniprot
Match: A0A7S2RYM3_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYM3_9STRA)

HSP 1 Score: 316 bits (810), Expect = 5.350e-108
Identity = 154/196 (78.57%), Postives = 179/196 (91.33%), Query Frame = 0

Query:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRPRT-EPKSGCC 195
            M++ RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDDATVKFEIWDTAGQERYRSLAPMYYRGA+AAIVVYD+TNK+SFNGA+SWVKELQ+RGDPNV+IALAGNK+DLEH+R+V++EEA  YA +NG++HMETSAKSA NVK++FVEIA+KLPK   +  REAFPI+ P+T + +  CC
Sbjct:    1 MAANRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDDATVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNKDSFNGARSWVKELQKRGDPNVVIALAGNKSDLEHKRKVETEEAEAYALENGILHMETSAKSATNVKSLFVEIARKLPKNPPETPREAFPIIPPKTSQSRRQCC 196

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BLAST of mRNA_L-elsbetiae_contig609.14627.1 vs. uniprot
Match: T0Q598_SAPDV (Ras-like protein Rab-5A n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0Q598_SAPDV)

HSP 1 Score: 315 bits (808), Expect = 1.080e-107
Identity = 160/196 (81.63%), Postives = 173/196 (88.27%), Query Frame = 0

Query:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDA-TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRPRTEPKSGCC 195
            M+S + CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDD  TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK+SF GAKSWVKELQRRGDPNVIIALAGNKADLE RR+V  EEARQYAE+N ++HMETSAK+A NVK++FV IAQKLPK   QPER+AFPI       K+GCC
Sbjct:    1 MASNKTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVSLDDGMTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDPNVIIALAGNKADLEARRKVDLEEARQYAEENEILHMETSAKTAVNVKDLFVAIAQKLPKNPQQPERDAFPITPVTPPKKNGCC 196

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BLAST of mRNA_L-elsbetiae_contig609.14627.1 vs. uniprot
Match: A0A5D6XMY9_9STRA (Uncharacterized protein n=23 Tax=Oomycota TaxID=4762 RepID=A0A5D6XMY9_9STRA)

HSP 1 Score: 315 bits (807), Expect = 1.640e-107
Identity = 160/198 (80.81%), Postives = 175/198 (88.38%), Query Frame = 0

Query:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDA-TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRPRTEP--KSGCC 195
            M+ G+ CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDD  TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK+SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+ EEA QYAEDN ++HMETSAK+A NVK++FV IA++LPK   QPEREAFPI  P  +   KSGCC
Sbjct:    1 MAQGKTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVGLDDGLTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDPNVVIALAGNKADLEARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPHQPEREAFPITPPTNQKQNKSGCC 198

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BLAST of mRNA_L-elsbetiae_contig609.14627.1 vs. uniprot
Match: A0A6U2XTP3_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U2XTP3_9STRA)

HSP 1 Score: 315 bits (807), Expect = 1.760e-107
Identity = 155/193 (80.31%), Postives = 176/193 (91.19%), Query Frame = 0

Query:    3 SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRPRTEPKSGCC 195
            + R+ HFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ VQLD++TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYD+TN +SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+ EEA  YA +NGL+H+ETSAK+A NVK++FVEIA+KLPK   +PEREAFPI+ P+T+ KS CC
Sbjct:    9 NSRIHHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVQLDESTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNPDSFTGAKSWVKELQRRGDPNVVIALAGNKADLESRRKVEFEEANAYATENGLLHLETSAKNANNVKSLFVEIAKKLPKQEPEPEREAFPIL-PQTQEKSNCC 200

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BLAST of mRNA_L-elsbetiae_contig609.14627.1 vs. uniprot
Match: A0A1E7EUF1_9STRA (Ras-related small GTPase Rab5 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUF1_9STRA)

HSP 1 Score: 314 bits (805), Expect = 2.880e-107
Identity = 153/194 (78.87%), Postives = 176/194 (90.72%), Query Frame = 0

Query:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRPRTEPKSGC 194
            MSS RV HFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ VQLD++TVKFEIWDTAGQERYRSLAPMYYRGAAAAI+VYD+TN +SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+ EEA+ YAE+NG++H+ETSAK+A NVK +FVE+A+KLPK   QPEREAFP+  P+ + ++ C
Sbjct:    1 MSSSRVHHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVQLDESTVKFEIWDTAGQERYRSLAPMYYRGAAAAIIVYDITNPDSFTGAKSWVKELQRRGDPNVVIALAGNKADLESRRKVEFEEAQSYAEENGILHLETSAKNANNVKALFVELAKKLPKNAPQPEREAFPLAAPQNDNRNCC 194

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig609.14627.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig609.14627.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FJC7_ECTSI	6.330e-134	98.46	Rab5, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835Z7I1_9STRA	8.090e-114	86.91	Rab5, rab family GTPase n=1 Tax=Tribonema minus Ta...	[more]
F0YJN1_AURAN	3.980e-112	81.03	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A6V1MPB5_HETAK	2.590e-110	83.59	Hypothetical protein n=2 Tax=Chattonellaceae TaxID...	[more]
A0A7S1ZIQ9_TRICV	5.270e-108	81.25	Hypothetical protein n=3 Tax=Mediophyceae TaxID=58...	[more]
A0A7S2RYM3_9STRA	5.350e-108	78.57	Hypothetical protein n=2 Tax=Rhizochromulina marin...	[more]
T0Q598_SAPDV	1.080e-107	81.63	Ras-like protein Rab-5A n=4 Tax=Saprolegniaceae Ta...	[more]
A0A5D6XMY9_9STRA	1.640e-107	80.81	Uncharacterized protein n=23 Tax=Oomycota TaxID=47...	[more]
A0A6U2XTP3_9STRA	1.760e-107	80.31	Hypothetical protein n=1 Tax=Amphiprora paludosa T...	[more]
A0A1E7EUF1_9STRA	2.880e-107	78.87	Ras-related small GTPase Rab5 n=1 Tax=Fragilariops...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 122..142
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 9..30 score: 50.96 coord: 32..48 score: 32.53 coord: 147..169 score: 37.47 coord: 112..125 score: 51.08 coord: 50..72 score: 50.66
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 9..172 e-value: 3.6E-89 score: 312.2
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 14..194 e-value: 7.6E-6 score: 33.5
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 11..171 e-value: 1.1E-12 score: 42.4
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 6..172 e-value: 6.7E-33 score: 125.3
None	No IPR available	GENE3D	3.40.50.300		coord: 6..195 e-value: 6.0E-65 score: 220.3
None	No IPR available	PANTHER	PTHR24073:SF1090	RAS SMALL GTP-BINDING FAMILY PROTEIN-RELATED	coord: 7..177
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 7..177
None	No IPR available	PROSITE	PS51419	RAB	coord: 3..195 score: 33.412
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 9..163 e-value: 6.5E-31 score: 105.3
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 10..169 e-value: 3.0E-61 score: 205.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..183

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig609	contig	L-elsbetiae_contig609:2562..7126 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig609.14627.1	mRNA_L-elsbetiae_contig609.14627.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig609 1096..7275 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig609.14627.1 ID=prot_L-elsbetiae_contig609.14627.1|Name=mRNA_L-elsbetiae_contig609.14627.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=196bp
MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKV
QLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAK
SWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMET
SAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRPRTEPKSGCC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase
IPR027417	P-loop_NTPase