prot_L-elsbetiae_contig608.14617.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig608.14617.1
Unique Nameprot_L-elsbetiae_contig608.14617.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length220
Homology
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BLAST of mRNA_L-elsbetiae_contig608.14617.1 vs. uniprot
Match: D7FY19_ECTSI (Sorting and Assembly Machinery 35kDa protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY19_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 3.980e-67
Identity = 138/224 (61.61%), Postives = 153/224 (68.30%), Query Frame = 0 
Query:    1 MYAALDLRLGNSGGDFFFGAEPTSLDACVFGHLAEAWTLAGLLDLLPAFDNLARFFRLVCCEYFRPGSFPTEAQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSGAGAVVRQAMLRADYVNSLNAFNQLPGCALCSEVPYVEDPYPPRPLVNAGIPPPVLAGSMPG------TDPAGAXXXXXXXXXXXXXXAPG--DILPLKYTVASTAAFLLLSTILSR 216
            MYAALDLRLGNS   FFFG+ PTS+DA VFGHLAEAWT+A LLDLLPAFDNL+R FR VC  YFRPGSFP  +                                 SG+   +R AMLRADYVNS NAFNQL GCALCSEVPY+EDPYPPRP+ NAGIPPPVLAG +PG      T  AG+XXXXXXXXXXXX  A    + LP+KYTV S AAF++LS ILSR
Sbjct:  205 MYAALDLRLGNSKEAFFFGSRPTSVDAVVFGHLAEAWTIAVLLDLLPAFDNLSRLFRHVCDNYFRPGSFPPPSSGGEGVAESKK----------------------SGSEDRLRDAMLRADYVNSHNAFNQLAGCALCSEVPYIEDPYPPRPIANAGIPPPVLAGDLPGVEGAQGTAAAGSXXXXXXXXXXXXGKATAANESLPVKYTVISIAAFMVLSNILSR 406
[Close]
BLAST of mRNA_L-elsbetiae_contig608.14617.1 vs. uniprot
Match: W7TNF1_9STRA (Metaxin 1 n=5 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNF1_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.680e-18
Identity = 65/158 (41.14%), Postives = 83/158 (52.53%), Query Frame = 0 
Query:    1 MYAALDLRLGNSGGDFFFGAEPTSLDACVFGHLAEAWTLAGLLDLLPAFDNLARFFRLVCCEYFRPGSFPTEAQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSGAGAVVRQAMLRADYVNSLNAFNQLPGCALCSEVPYVEDPYPPRPLVNAGI 158
            +Y  LD  LG S GDFFFG EPTS DAC+FGHLAEA     +L L+  FDNL RFF  +  ++F  G     AQAA  XXXXXXX                    G    + +++    ADY+N+ N FNQ+    LC+E P V +P   + L   G+
Sbjct:  233 VYRELDNLLGASTGDFFFGREPTSFDACLFGHLAEALADVNVLVLVSTFDNLMRFFGRIAEDFFNVG-----AQAAASXXXXXXXLSASLGGPVREPQ-------GFSIASDLKECYRHADYMNNRNPFNQVEAAKLCAEAPLVPEPMVQKFLEGGGL 378
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig608.14617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FY19_ECTSI3.980e-6761.61Sorting and Assembly Machinery 35kDa protein n=2 T... [more]
W7TNF1_9STRA2.680e-1841.14Metaxin 1 n=5 Tax=Monodopsidaceae TaxID=425072 Rep... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033468Metaxin, glutathione S-transferase domainPFAMPF17171GST_C_6coord: 2..56
e-value: 3.4E-10
score: 39.6
IPR036282Glutathione S-transferase, C-terminal domain superfamilySUPERFAMILY47616GST C-terminal domain-likecoord: 2..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig608contigL-elsbetiae_contig608:176..4879 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig608.14617.1mRNA_L-elsbetiae_contig608.14617.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig608 146..5803 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig608.14617.1 ID=prot_L-elsbetiae_contig608.14617.1|Name=mRNA_L-elsbetiae_contig608.14617.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=220bp
MYAALDLRLGNSGGDFFFGAEPTSLDACVFGHLAEAWTLAGLLDLLPAFD
NLARFFRLVCCEYFRPGSFPTEAQAAAADDTTGGSAGAADGGGGGGGGGG
DEDAAGSGAGAVVRQAMLRADYVNSLNAFNQLPGCALCSEVPYVEDPYPP
RPLVNAGIPPPVLAGSMPGTDPAGAAAAAAAAADEETTTAPGDILPLKYT
VASTAAFLLLSTILSRAGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033468Metaxin_GST
IPR036282Glutathione-S-Trfase_C_sf