prot_L-elsbetiae_contig6069.14606.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6069.14606.1
Unique Nameprot_L-elsbetiae_contig6069.14606.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length310
Homology
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BLAST of mRNA_L-elsbetiae_contig6069.14606.1 vs. uniprot
Match: D8LGM9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGM9_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 9.190e-96
Identity = 277/309 (89.64%), Postives = 289/309 (93.53%), Query Frame = 0 
Query:    1 MASNDISDAGVGSLARLLDDEPPSYCCVLSSLDLRGNSIGSKGCKVLTEHLRKNATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTAILAVLREGNNTVRELSIGSQLLRSREEVATCHVARMLETPPCMLRSLDLSRCGMGDEGAHILRGALMGHPTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDALAEGMECNASVERLFVWGNHFGQASLRRFGNLNGGRFALVGVFIDVQPFVVDGVFHAAESFE 309
            +ASNDI DAGVGSLARLLDDEPPSY  VLSSLDLRGNSIGSKGC++LTE LR+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    FTA+LAVLREGNNTVRELSIGSQLLRSREEVA CHV+R LETPP MLR LDLS CG+GDEGA++LRGAL GHPTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDALAEGMECNASVERLFVWGNHFGQASL+RFG L GGRFALVGVF+DVQPFVVDGV+HAAE FE
Sbjct:   68 VASNDIGDAGVGSLARLLDDEPPSYSSVLSSLDLRGNSIGSKGCQLLTERLRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEAGFTAVLAVLREGNNTVRELSIGSQLLRSREEVAACHVSRTLETPPYMLRLLDLSGCGIGDEGAYVLRGALTGHPTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDALAEGMECNASVERLFVWGNHFGQASLKRFGGLGGGRFALVGVFLDVQPFVVDGVYHAAEKFE 376
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6069.14606.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGM9_ECTSI9.190e-9689.64Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 143..170
e-value: 10.0
score: 10.1
coord: 82..109
e-value: 6.9
score: 11.2
coord: 54..81
e-value: 0.019
score: 24.1
coord: 199..226
e-value: 0.49
score: 19.3
coord: 26..53
e-value: 1.9
score: 15.2
coord: 171..198
e-value: 0.72
score: 18.2
coord: 227..254
e-value: 0.3
score: 20.1
NoneNo IPR availablePANTHERPTHR24114:SF30LEUCINE-RICH REPEAT-CONTAINING PROTEIN 74Acoord: 70..270
coord: 1..168
NoneNo IPR availablePANTHERPTHR24114FAMILY NOT NAMEDcoord: 70..270
NoneNo IPR availablePANTHERPTHR24114FAMILY NOT NAMEDcoord: 1..168
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 4..124
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 134..278
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..132
e-value: 2.7E-24
score: 87.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 133..280
e-value: 9.6E-32
score: 111.7
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 144..161
e-value: 0.0012
score: 18.7
coord: 171..193
e-value: 0.008
score: 16.2
coord: 53..76
e-value: 6.1E-5
score: 22.8
coord: 26..47
e-value: 0.036
score: 14.1
coord: 200..220
e-value: 1.6
score: 8.9
coord: 226..249
e-value: 7.1E-5
score: 22.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6069contigL-elsbetiae_contig6069:902..4347 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6069.14606.1mRNA_L-elsbetiae_contig6069.14606.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6069 820..4554 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6069.14606.1 ID=prot_L-elsbetiae_contig6069.14606.1|Name=mRNA_L-elsbetiae_contig6069.14606.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=310bp
MASNDISDAGVGSLARLLDDEPPSYCCVLSSLDLRGNSIGSKGCKVLTEH
LRKNATLTSLDLSSNALKSEGASYIAQMLSENFAIERLVITNTDMTEAGF
TAILAVLREGNNTVRELSIGSQLLRSREEVATCHVARMLETPPCMLRSLD
LSRCGMGDEGAHILRGALMGHPTMRSLDLSRNRVGITGAQALASLLVGDS
SLSSLCLQANLIGDEGARAFKVVLLHSQTLATLDLRSNDIHDGGLDALAE
GMECNASVERLFVWGNHFGQASLRRFGNLNGGRFALVGVFIDVQPFVVDG
VFHAAESFE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt