prot_L-elsbetiae_contig5988.14494.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5988.14494.1
Unique Nameprot_L-elsbetiae_contig5988.14494.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1185
Homology
BLAST of mRNA_L-elsbetiae_contig5988.14494.1 vs. uniprot
Match: D7FMH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH0_ECTSI)

HSP 1 Score: 833 bits (2151), Expect = 9.300e-278
Identity = 643/1279 (50.27%), Postives = 740/1279 (57.86%), Query Frame = 0
Query:    1 VFDVEFPPNGPLGITFEWAVDPAARWYGDGGTPVASPRTPPLGASTLPPISPSPTSKPTGHAAPPLELPVGPALLPHALRIQSFPALQPLESPRSVAPGAGTTSAGGGDSEISIDGETQPTAVTAVAIFQTFS-----AKGPRTSDE-----SHVSSADAEQS---------SPSKRTNTAEAKRTRAATSEPMGGAERFGPVAGRDVLRAGDTLVAVNGNPVAGPAARDAGTASFEDVVGVVAAATATSARAQTAEGP----QRKLPRVLKFRREARLEGPTPPAVVASSSPPRDGPSKGGWVRGMSGSEPAPRSSSSGETAERGTANQAVASDIGIN--VAAAXXXXXAAPLPPTSSWSTLYPVLQLKGWGRAPGVPRGGRTAQETAQGTSKEPGGGRLPAPLSSRLRGSETSSIGTDGLSALGSSRSRVSASSRGSDASFVSNTSSKASGILRRRKRGRERKGKAGGSSTVFSPSSAAARIKADAKRGEALLEPLVCPRQQRLKNILEESSVLRPLSVRLTNLSYWYQQRRLLGGFRHMHRRAEYDPRSKRWEASTYMLGDRPSDGKLVPILTPIKPAAGTIISTEGQALALAAKSVKKRDANPGAARGPKPPGMTQFTMLQTHISVLVVSHVFEGLSHADRLALVFTALHDELAATSPPPXXXXXXR--------PSSPSXXXXXXXXXXVPLSTATPIAPKAKPG--QDPPATEGSERREE---GASAGVLDSDDQSTGAGGGSPPH-----AGGDEAGDPGEGNGASTSAGRPSGAAPTPSDG--LPGNSADSGAAAQ--PSGEDHGGEEERRTENSRWRQRQRQPPRQHHTIRGGVKASYVGPNVEALPVWGALDAIAGSALLVDCRTPAQWRADEHRPTAQ-----------------------------ELWGPARSGHRTLANSIRVGEAAVKSGMERIIAESKLLREAAPKFEHFDRFGEGAGTGGXXXXXXXXDVSGRKGGGPAGSPIASPRAHHGSAAPALVTKAGRGVDRTHPHFFHGLGPNARKLFMELYAENRSRLLAPISRNATADSVAPSSISSGQEQRPEKASSAAPPDGSSL-----------LSLISGSQQT------------SPRSVTGSLGTGPGXXXXXXXXXXXXXXXXXXXXXXHAXGAFAAAGPPPDLDAGIMDRYGVLLGRLTEAVLRIQRTRRLGGLPRAARRLRRRQRAALAAQRVFRGHLGRRYASIWKAVSALASTRLSAGWRRFVAQREFLVFRARARAGAIGLQ 1180
            +F+V FPP GPLGITFEWAVD AA         V  P  PP  + TL       + +                              Q   SPR     A TT  G     +   GE QP A T+ +  +         +G R S E     S + S D             S S R  T+    TR  T+E  GGAE FGP AGR++LR GD LV VNG PVAG AARDAG  SFED VGVVAAATA  +    A G      R+ PRVLKFRRE R + P+  +V      PRD PSKGGWV G+ G   A   SSSG   E+ T   +  S  G+   ++                   L+PVLQ+KG G+ P +  G    + TA     E G G +P   SSR R S+ SS+  DGLSAL S RSR S  S+GS++SF S  +SK  G+ R RKRG + + +AGG S  F  +S A RIKA+A+RGEALLEPLVCPRQQ LKNILE S  L+PL+VRLTNLSYWYQQRRLLGG RHMHR A +DPR+KRWEAS YMLGDRPSDGKLVPILTPIK + GT IST+GQALA+AAKS K+RDANPGA RGPKPPGMTQ TMLQTHIS+LVVS  F GLSHADRLALVFT LH+ELAA++ PP               PSS +              TAT + P +  G  +DP   + ++ R     G S       D+S  A  G P       AGG+     GE  G+        G     S+G  LP  +A   +     P G D   +EERR +  R RQR+R     H  IRG VKAS+VG NVE LPVWGALDAIAGS+LLVDCRTPAQWRA+   PT Q                             ELWGPARSGHRTLAN+ RV E AV+S MERIIAESK LREAAPKFEHFDRFGE   + G            +K GG +      P  +   A PA  TKAGR    THPHFFHGLGPNARKLFMELY ENRSRLLAPISR +    VA    SSG+      +++ APPDG+SL           LS+    QQ             SPRSV+GS             XXXXXXXXXXX    HA GAFAA+GPPPDLDAG++DRYGVLLGRL EA  RIQR RRLGGLPRAARRL RRQRA LA QRVFRGHLGR YAS+WK V+ LA+TRLSAGWRRF  QR+FL FRARARAGAIGLQ
Sbjct:   58 IFEVIFPPTGPLGITFEWAVDRAA---------VVRPALPPT-SQTLDDDEDYTSRR------------------------------QETTSPRLARARATTTETG--HDTVPHSGERQPLAATSGSGEELLRDGLGLPRGRRLSQEHDRTKSGLPSTDTSNGAVSGPLLDKSHSMRAVTSLNGTTRE-TAERQGGAEAFGPAAGREILRPGDILVEVNGMPVAGDAARDAGIVSFEDAVGVVAAATAARSPTPEAHGQLDAAARQRPRVLKFRREGRGQRPSSASVTLLLPSPRD-PSKGGWVNGIPGGGSAGSRSSSGTVTEQDTTGLSSRSAHGLESKISNPADSSEXXXXXXXXXXXXLHPVLQVKGVGQVPHMAAGDPGDKNTAGSWIGEKGMGEIPL-ASSRSRASDASSVDMDGLSALSSLRSRSSVRSKGSESSFNSRATSKTGGVPRSRKRGGKER-QAGGRSGAFQSTSTAERIKAEARRGEALLEPLVCPRQQLLKNILETSETLQPLAVRLTNLSYWYQQRRLLGGARHMHRGAVFDPRTKRWEASVYMLGDRPSDGKLVPILTPIK-SVGTTISTKGQALAIAAKSAKERDANPGAVRGPKPPGMTQLTMLQTHISILVVSDAFTGLSHADRLALVFTTLHNELAASARPPPSLPDNSTNAFSSPLPSSNTPPSSLLSPATKAKKTATALTPDSVEGGRRDPSVADEADDRSNARRGVSVQSPGYHDESKRAAAGRPHSIRVVAAGGER--QVGEEKGSXXXXXXXXGGRNDVSNGGRLPVGTASPSSVHPIIPIG-DINSQEERRKDGDR-RQRRR-----HRVIRGNVKASFVGQNVEGLPVWGALDAIAGSSLLVDCRTPAQWRAETFPPTQQDRCLVHRQGPGALYVHSRSHINEKEERFEELWGPARSGHRTLANNPRVKEGAVRSTMERIIAESKALREAAPKFEHFDRFGE---SNGDADQTKGNPPPPKKSGGESHGAGHQPNTNPSVATPA-ATKAGR----THPHFFHGLGPNARKLFMELYTENRSRLLAPISRRSA--DVAGPVASSGRHL----SAAPAPPDGTSLPSPTTARNGSQLSISRQQQQQLHEKTPPREEGKSPRSVSGSFAA----------XXXXXXXXXXXENVRHAAGAFAASGPPPDLDAGVLDRYGVLLGRLVEAATRIQRERRLGGLPRAARRLWRRQRAVLAVQRVFRGHLGRSYASMWKVVAVLAATRLSAGWRRFSTQRKFLAFRARARAGAIGLQ 1256          
BLAST of mRNA_L-elsbetiae_contig5988.14494.1 vs. uniprot
Match: A0A6H5KC52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC52_9PHAE)

HSP 1 Score: 774 bits (1998), Expect = 5.550e-255
Identity = 631/1318 (47.88%), Postives = 732/1318 (55.54%), Query Frame = 0
Query:    1 VFDVEFPPNGPLGITFEWAVD----------PAARWYGDG-----------------GTP-------------VASPRTPPLGASTLPPISPSPTSKPTGHAAPPLELPVGPALLPHALRIQSFPALQPLESPRS-VAPGAGTTSAGGGDSEISIDGETQPTAVTAVAIFQTF------------------SAKGPRTSDESHV----SSADAEQSSPSKRTNTAEAKRTRAATSEPMGGAERFGPVAGRDVLRAGDTLVAVNGNPVAGPAARDAGTASFEDVVGVVAAATATSARAQTAEGPQR-----KLPRVLKFRREARLEGPTPPAVVASSSPPRDGPSKGGWVRGMSGSEPAPRSSSSGETAERGTANQAVASDIGINVAAAXXXXXAAPLPPTSSWSTLYPVL--QLKGWGRAPGVPRGGRTAQETAQGTSKEPGGGRLPAPLSSRLRGSETSSIGTDGLSALGSSRSRVSASSRGSDASFVSNTSSKASGILRRRKRGRERKGKAGGSSTVFSPSSAAARIKADAKRGEALLEPLVCPRQQRLKNILEESSVLRPLSVRLTNLSYWYQQRRLLGGFRHMHRRAEYDPRSKRWEASTYMLGDRPSDGKLVPILTPIKPAAGTIISTEGQALALAAKSVKKRDANPGAARGPKPPGMTQFTMLQTHISVLVVSHVFEGLSHADRLALVFTALHDELAATSPPPXXXXXXRP---SSPSXXXXXXXXXXVPLSTA-----TPIAPKA-KPGQDPPA----TEGSERREEGASAGVLDSDDQSTGAGGGSPPHAGGDEAGDPGEG---------------------------NGASTSAGRPSGAAPTPSDGLPGNSADSGAAAQPSGEDHGGEEERRTENSRWRQRQRQPPRQHHTIRGGVKASYVGPNVEALPVWGALDAIAGSALLVDCRTPAQWRADEHRPTAQELWGPARSGHRTLANSIRVGEAAVKSGMERIIAESKLLREAAPKFEHFDRFGEGAGTGGXXXXXXXXDVSGRKGGGPAGSPIASPRAHHGSAAPALVTKAGRGVDRTHPHFFHGLGPNARKLFMELYAENRSRLLAPISRNATADSVAPSSISSGQEQRPEKASSAAPPDGSSLLSLIS---GSQQT------------------------SPRSVTGSLGTGPGXXXXXXXXXXXXXXXXXXXXXXHAXGAFAAAGPPPDLDAGIMDRYGVLLGRLTEAVLRIQRTRRLGGLPRAARRLRRRQRAALAAQRVFRGHLGRRYASIWKAVSALASTRLSAGWRRFVAQREFLVFRARARAGAIGLQV 1181
            +FDV FPP GPLGITFEWAVD          P ++   D                  G+P             V + R   LG+STLPPI+ SP+S P  +AA P + P  P  +PHALRIQ FP L P E+  S  A   GTT+  G D+ +   GE QP A T  +  + F                  +  G  ++D S+     S  D   S P++ TN      T   T+E  GGAE FGP AGR++LR GD LV VNG PVAG AARDAG  SFED VGVVAAATA  + A  A G QR     + P VLKFRRE R + P+  +       PR  PSKGGWV G+ G   A   SSSG   E+ T + +  S  G+        XX                   Q+KG G+ P +  G    + T  G   E G G +P   SSR R S  SS+  DGLSAL S RSR SA S+GS++SF S  +SK  G+ R RKRG + + +AGG S VF  +S A RIKA+A+                                        YQQRRLLGG RHMHR A +DPR+KRWEAS YMLGDRPSDGKLVPILTPIK + GT + T+GQALALAAKS K+RDANPGA RGPKPP MTQ TML+THIS+LVVS  F GLSHADRLALVFT LH+ELAA++ PP      R    SSP           +P +T      T +AP A + G+   +    T+G      G S       D+S  AG G P H      G+  E                            N  S   G P G A          S  S     P+G  +  EE  +  + R R+R       H  IRG VKAS+VGPNVE LPVWGALDAIAGS+LLVDCRTPAQWRA+ + PT QELWG ARSGHRTLAN  RV E  VKS MERIIAESK+LREAAPKFEHFDRFGE  G             +    GG +      P  +   AAPA  TKAGR    THPHFFHGLGPNARKLFMELY ENRSRLLAPISR + AD   P  ++S     P    + APPD +SL S  +   GSQ +                        SPRSV+GS             XXXXXXXXXXXXXXX  X  FAA+GPPPDLDAG++DRYGVLLGRL EA  RIQR RRLGGLPRAARRLRRRQRA LA QRVFRGHLGRRYAS+WK V+ LA+TRLSAGWRRF AQR+FL FRARARAGAIGLQV
Sbjct:   58 IFDVTFPPTGPLGITFEWAVDRTAVVHPALPPTSQTLDDDEDDTSRRQAGQDSAGILGSPSVGCKQREPPDVAVVTARATVLGSSTLPPITSSPSSAPKENAARPADAPSAPVSIPHALRIQRFPLLPPQETTSSRFAWARGTTTETGHDT-VPHSGERQPLAATGESGEELFRDGLGLPSGRRLPQEHDRTKSGLPSTDTSNGVVNGSLLDKSHSMPAE-TNL---NGTTRETAERQGGAEVFGPAAGREILRPGDILVEVNGMPVAGAAARDAGIVSFEDAVGVVAAATAARSPAPEAHGQQRDAAARQRPLVLKFRREGRGQRPSSASDTLLLPSPRY-PSKGGWVNGIPGGGSAGSRSSSGTVTEQDTTDSSSRSARGLETKICDPAXXXXXXXXXXXXXXXXXXXXPQVKGVGQVPHMAAGDPGDKNTPGGWIGEMGRGEIPL-ASSRSRASGASSVDMDGLSALSSLRSRSSARSKGSESSFNSRATSKTGGVPRSRKRGGKER-QAGGRSGVFQSTSTAERIKAEAR----------------------------------------YQQRRLLGGARHMHRGAVFDPRTKRWEASVYMLGDRPSDGKLVPILTPIK-SVGTTVLTKGQALALAAKSAKERDANPGAVRGPKPPMMTQLTMLETHISILVVSDAFTGLSHADRLALVFTTLHNELAASAHPPPSLPDVRTNAFSSPLPFSNTPPSSLLPQATKAKKTPTALAPDAVEEGRGDHSVADGTDGRPNARRGVSVQSPGHHDESNRAGAGRP-HGVAVGTGEKSERVVAAGXXXXXXXXXXXXXXXXIEEGGRNDVSNGRGLPVGTA----------SLSSVHPVIPTGGINSQEERGKDGDQRQRRR-------HRVIRGNVKASFVGPNVEGLPVWGALDAIAGSSLLVDCRTPAQWRAETYPPTEQELWGAARSGHRTLANHPRVKEGIVKSTMERIIAESKVLREAAPKFEHFDRFGESNGDADQTKGNPPPPTTS---GGQSDGAGHQPNTNPAVAAPA-ATKAGR----THPHFFHGLGPNARKLFMELYTENRSRLLAPISRRS-ADVAGP--VASSGRHLPV---APAPPDCTSLPSPTTARNGSQLSISWQQXXXXXXXXXXXXXXREKVKSPRSVSGSFAX----------XXXXXXXXXXXXXXXXXXXXFAASGPPPDLDAGVLDRYGVLLGRLVEAATRIQRVRRLGGLPRAARRLRRRQRAVLAVQRVFRGHLGRRYASMWKVVAVLAATRLSAGWRRFSAQRKFLAFRARARAGAIGLQV 1284          
BLAST of mRNA_L-elsbetiae_contig5988.14494.1 vs. uniprot
Match: A0A6U4LQX9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4LQX9_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.350e-17
Identity = 70/174 (40.23%), Postives = 96/174 (55.17%), Query Frame = 0
Query:  456 AARIKADAKRGEALLEPLVCPRQQRLKNILEESSVLRPLSVRLTNLSYWYQQRRLLGGFRHMHRRAEYDPRSKRWEASTYMLGDRPSDGKLVPILTPIKPAAGTIISTEGQALALAAKSVKKRDANPGAARGPKPPGMTQFT-MLQTHISVLVVSHVFEGLSHADRLALVFTAL 628
            AAR   DA++    +E    P Q +L+  LE+S +LRP+ VRL N SYWY+QR  LGG RHM R    + +S RWE   +  G    DG   P L  ++    T ++ E +AL    K+ + RDANP        P M   + +L TH  VL+VS VFE ++H +RL LV+ AL
Sbjct:   72 AARETEDAEKKRKAMEAAFAPVQLQLQETLEKSRLLRPMRVRLKNESYWYRQRADLGGARHMFRGVTLNEQSNRWEGRLFRTGISEEDGGKEPQLRFLE---NTYLN-ELKALKEVEKAARTRDANPSEQSIDGLPTMKDASRILATHFRVLLVSPVFEEMTHTERLELVYEAL 241          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5988.14494.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FMH0_ECTSI9.300e-27850.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KC52_9PHAE5.550e-25547.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6U4LQX9_9STRA2.350e-1740.23Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 1118..1146
score: 6.98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5988contigL-elsbetiae_contig5988:2850..10569 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5988.14494.1mRNA_L-elsbetiae_contig5988.14494.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5988 2850..10569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5988.14494.1 ID=prot_L-elsbetiae_contig5988.14494.1|Name=mRNA_L-elsbetiae_contig5988.14494.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1185bp
VFDVEFPPNGPLGITFEWAVDPAARWYGDGGTPVASPRTPPLGASTLPPI
SPSPTSKPTGHAAPPLELPVGPALLPHALRIQSFPALQPLESPRSVAPGA
GTTSAGGGDSEISIDGETQPTAVTAVAIFQTFSAKGPRTSDESHVSSADA
EQSSPSKRTNTAEAKRTRAATSEPMGGAERFGPVAGRDVLRAGDTLVAVN
GNPVAGPAARDAGTASFEDVVGVVAAATATSARAQTAEGPQRKLPRVLKF
RREARLEGPTPPAVVASSSPPRDGPSKGGWVRGMSGSEPAPRSSSSGETA
ERGTANQAVASDIGINVAAAAAAATAAPLPPTSSWSTLYPVLQLKGWGRA
PGVPRGGRTAQETAQGTSKEPGGGRLPAPLSSRLRGSETSSIGTDGLSAL
GSSRSRVSASSRGSDASFVSNTSSKASGILRRRKRGRERKGKAGGSSTVF
SPSSAAARIKADAKRGEALLEPLVCPRQQRLKNILEESSVLRPLSVRLTN
LSYWYQQRRLLGGFRHMHRRAEYDPRSKRWEASTYMLGDRPSDGKLVPIL
TPIKPAAGTIISTEGQALALAAKSVKKRDANPGAARGPKPPGMTQFTMLQ
THISVLVVSHVFEGLSHADRLALVFTALHDELAATSPPPPPPPPPRPSSP
SSPSPATPPQPVPLSTATPIAPKAKPGQDPPATEGSERREEGASAGVLDS
DDQSTGAGGGSPPHAGGDEAGDPGEGNGASTSAGRPSGAAPTPSDGLPGN
SADSGAAAQPSGEDHGGEEERRTENSRWRQRQRQPPRQHHTIRGGVKASY
VGPNVEALPVWGALDAIAGSALLVDCRTPAQWRADEHRPTAQELWGPARS
GHRTLANSIRVGEAAVKSGMERIIAESKLLREAAPKFEHFDRFGEGAGTG
GGGDDSGGGDVSGRKGGGPAGSPIASPRAHHGSAAPALVTKAGRGVDRTH
PHFFHGLGPNARKLFMELYAENRSRLLAPISRNATADSVAPSSISSGQEQ
RPEKASSAAPPDGSSLLSLISGSQQTSPRSVTGSLGTGPGGGGGGSSGGG
GGGGGTAAANVRHAAGAFAAAGPPPDLDAGIMDRYGVLLGRLTEAVLRIQ
RTRRLGGLPRAARRLRRRQRAALAAQRVFRGHLGRRYASIWKAVSALAST
RLSAGWRRFVAQREFLVFRARARAGAIGLQVRLH*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS