prot_L-elsbetiae_contig5977.14475.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5977.14475.1
Unique Nameprot_L-elsbetiae_contig5977.14475.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length138
Homology
BLAST of mRNA_L-elsbetiae_contig5977.14475.1 vs. uniprot
Match: D7FSF3_ECTSI (PsbP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSF3_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 4.410e-83
Identity = 118/136 (86.76%), Postives = 127/136 (93.38%), Query Frame = 0
Query:    1 VPDGWERNDAEISGRRKLIVYTSPKNPGTNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEADGVSSRMVNSYTSKNSYVYDYIVDQEGRPEKHIKTIWILFPDQGQLATVTAQCNESDYPAVGKSIDALIASVAK 136
            VPDGWERNDAEISGRRK++VYTSP  PG NAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEA GVSSRM+ SYT KNSYVYDYIVDQEGRPEKHIKT+W+LFP+QGQLAT+TAQCNESDY  VGK+ID+LIASV K
Sbjct:   93 VPDGWERNDAEISGRRKIVVYTSPTTPGANAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASGVSSRMLESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQLATITAQCNESDYAKVGKTIDSLIASVTK 228          
BLAST of mRNA_L-elsbetiae_contig5977.14475.1 vs. uniprot
Match: A0A835ZDA3_9STRA (PsbP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDA3_9STRA)

HSP 1 Score: 147 bits (371), Expect = 8.450e-43
Identity = 66/128 (51.56%), Postives = 92/128 (71.88%), Query Frame = 0
Query:    1 VPDGWERNDAEISGRRKLIVYTSPKNPGTNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEADGVSSRMVNSYTSKNSYVYDYIVDQEGRPEKHIKTIWILFPDQGQLATVTAQCNESDYPAVGKSID 128
            VP GW + + EISGRRK++++TS  +   NAF+A TP RGDFT+LGSFGT DEVS+T++P   G+S  M+N  +  + Y YDYI+ QEGRPEKH+K++W +      L T+TAQC+E++YPA    +D
Sbjct:   29 VPAGWTQTETEISGRRKVVIWTS--DGSANAFIAVTPVRGDFTSLGSFGTADEVSQTLIPNGKGISGEMLNVKSKNSMYYYDYIIAQEGRPEKHLKSVWSVVSGDA-LVTLTAQCDEANYPAYASQMD 153          
BLAST of mRNA_L-elsbetiae_contig5977.14475.1 vs. uniprot
Match: A0A6V1S113_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S113_HETAK)

HSP 1 Score: 142 bits (357), Expect = 1.040e-39
Identity = 66/135 (48.89%), Postives = 91/135 (67.41%), Query Frame = 0
Query:    1 VPDGWERNDAEISGRRKLIVYTSPKNPGTNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEADGVSSRMVNSYTSKNSYVYDYIVDQEGRPEKHIKTIWILFPDQGQ--LATVTAQCNESDYPAVGKSIDALIAS 133
            VP GWE+++A ISG R + ++ +P  P  NAFVA TP RGD+T+LGSFG LD V  TV+P+  G+ SR + S + + +Y YDY V QEGRPEK +KTI+ + PD+    L T TAQC+ +DY   G  + A+ +S
Sbjct:   90 VPPGWEKSEAAISGGRTVTIFAAPGRPAANAFVAATPLRGDYTSLGSFGNLDYVESTVVPKGPGIESRCLESRSQRGTYFYDYTVKQEGRPEKRLKTIFAVVPDEFSPVLVTFTAQCDVADYEEYGTLLSAIASS 224          
BLAST of mRNA_L-elsbetiae_contig5977.14475.1 vs. uniprot
Match: A0A7S4EZ64_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EZ64_CHRCT)

HSP 1 Score: 118 bits (295), Expect = 1.980e-30
Identity = 53/145 (36.55%), Postives = 89/145 (61.38%), Query Frame = 0
Query:    1 VPDGWERNDAEISGRRKLIVYTSPKNPGTNAFVAYTPARGDFTTLGSFGTLDEVSKTVLP---------EADGVSSRMVNSYTSKNSYVYDYIVDQEGRPEKHIKTIWILFPDQGQ---LATVTAQCNESDYPAVGKSIDALIAS 133
            VP GW   ++E+SG RKL+  T P +   N FVA+TP RGD+T+LGSFG +D V  T+LP         E DG+  +M+   T + +Y++DY+++Q G+P + ++T++ +   +G+   L T+TAQC +  Y  +  ++  ++ S
Sbjct:   76 VPSGWSPEESELSGGRKLLAATDPADTDFNLFVAFTPIRGDYTSLGSFGNIDFVGSTILPQCPNGACTLETDGIRGKMIAQSTGRGAYIFDYLIEQTGQPSRRLRTLFSVQTVEGRGQNLITLTAQCRQERYDELSTTLREIVDS 220          
BLAST of mRNA_L-elsbetiae_contig5977.14475.1 vs. uniprot
Match: A0A7S0LK65_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LK65_9EUKA)

HSP 1 Score: 111 bits (278), Expect = 9.260e-28
Identity = 52/149 (34.90%), Postives = 90/149 (60.40%), Query Frame = 0
Query:    1 VPDGWERNDAEISGRRKLIVYTSPKNPGTNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPE---------ADGVSSRMVNSYTSKNSYVYDYIVDQEGRPEKHIKTIWILFPDQGQ---LATVTAQCNESDYPAVGKSIDALIASVAKT 137
            +P GW   ++E+SG RKL+    P +   N F+AYTP   D+T+LGSFG +D V  T+LP+         +DG+  +M++  T  ++YV+DY ++Q G+P + ++T++ +  + G+   L T+TAQC ++ Y  +  ++ A+I S   T
Sbjct:   90 LPAGWNPTESELSGGRKLVAAADPSDVDFNIFIAYTPIAADYTSLGSFGNIDSVGLTLLPQCAGSSCSLASDGIQGKMISQATQSSAYVFDYSIEQIGQPIRRLRTLFSVQTEVGRGKNLVTLTAQCKQARYDELAPTLRAVIDSFKYT 238          
BLAST of mRNA_L-elsbetiae_contig5977.14475.1 vs. uniprot
Match: A0A7S1XXW5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXW5_9STRA)

HSP 1 Score: 106 bits (264), Expect = 2.260e-26
Identity = 57/146 (39.04%), Postives = 92/146 (63.01%), Query Frame = 0
Query:    1 VPDGWERNDAEIS-GRRKLIVYTSPKNPGTNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEADGVSSRMVNSYTSKNS--YVYDYIVDQEGRPEKHIKTIWILFP-----DQGQLATVTAQCNESDYPA-VGKSIDALIASVAKT 137
            VP  W R +A  + G+   + Y SP+    NA +AYTP RGDFT+LGSFGT+ +V K +LP  D V+ RM+++  ++++  YV+DY+V+  G P +H+KT++ L P     D   + ++TAQ  ESD+ + V  ++D ++ S + T
Sbjct:   28 VPGDWRRQEAPAAAGQIPAVAYLSPRGASFNAVLAYTPVRGDFTSLGSFGTIKDVEKFILP--DNVNGRMISAKATRSNKAYVFDYVVEAPGAPVRHLKTLFALVPQNKATDIPSIISLTAQVLESDFNSGVEATMDGILDSFSFT 171          
BLAST of mRNA_L-elsbetiae_contig5977.14475.1 vs. uniprot
Match: A0A0M0J7U2_9EUKA (Psbp domain-containing protein chloroplastic-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J7U2_9EUKA)

HSP 1 Score: 104 bits (259), Expect = 3.810e-25
Identity = 52/148 (35.14%), Postives = 84/148 (56.76%), Query Frame = 0
Query:    1 VPDGWERNDAEISGRRKLIVYTSPKNPGTNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEA-----------DGVSSRMVNSYTSKNSYVYDYIVDQEGRPEKHIKTIWILFPDQGQ--LATVTAQCNESDYPAVGKSIDALIASVA 135
            +P+G+     E++  R+L+  T P +  TN F+A+TP R D+T+LGSFGT+D +  T+LP+            D +   M+   + K S+VYDY + Q+G P +H++++  +  D     L T+TAQC E  + AV  +  A+I S A
Sbjct:   68 LPEGYVMKPQELADGRRLVTATDPNDDTTNVFIAFTPIRPDYTSLGSFGTIDFIGSTLLPQCGSNGACAFASGDDIEGVMLEQASVKGSFVYDYTIQQQGGPMRHLRSLLAIKADGAASVLITLTAQCLEPKHAAVAATFKAIIESYA 215          
BLAST of mRNA_L-elsbetiae_contig5977.14475.1 vs. uniprot
Match: A0A7S2FED2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FED2_9STRA)

HSP 1 Score: 103 bits (256), Expect = 9.740e-25
Identity = 50/121 (41.32%), Postives = 77/121 (63.64%), Query Frame = 0
Query:    1 VPDGWERNDAEISGRRKLIVYTSPKNPGTNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEADGVSSRMVNSYTSKNSYVYDYIVDQEG-RPEKHIKTIWILFPDQGQLATVTAQCNESDY 120
            VP  W ++  +I G RKL++Y  P+N  TNAFV +TP   D+  LGSFGT+D V++TV+PE  G+ S +++S   K +Y +DY +     +P +H+ TI+ + P Q  L T +AQ  E++Y
Sbjct:   76 VPGTWSQS-VQILGDRKLVLYVDPENTETNAFVLFTPVAADYRGLGSFGTIDLVARTVIPEGPGIESNLLDSKQVKGNYFFDYTIKASADQPIRHLLTIFAVVPGQ-MLVTYSAQTTEANY 194          
BLAST of mRNA_L-elsbetiae_contig5977.14475.1 vs. uniprot
Match: A0A8J2SSX2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SSX2_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.630e-23
Identity = 49/133 (36.84%), Postives = 76/133 (57.14%), Query Frame = 0
Query:    1 VPDGWERNDAEISGRRKLIVYTSPKNPGTNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEADGVSSRMVNSYTSKNSYVYDYIVDQEGRPEKHIKTIWILFPDQGQLATVTAQCNESDY----PAVGKSIDA 129
            VP  W +   +  G RK+ +Y  P N  TNAF   TP RGD+T+LGSFG+++ V  TV+P A  ++  ++ S      YVY+YIV    +P++H+ TI+++  D   + T   Q  +SDY    P + K++ A
Sbjct:   77 VPADWVKLSGDPGGGRKMELYADPNNADTNAFALITPVRGDYTSLGSFGSVEVVQDTVMPAAPDITYDVIKSEAQTGKYVYEYIVQVPEQPKRHLTTIFMVVSDC--IVTFNFQAKQSDYNGDVPGLAKTVAA 207          
BLAST of mRNA_L-elsbetiae_contig5977.14475.1 vs. uniprot
Match: W7TLE2_9STRA (Psbp domain-containing protein chloroplastic-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLE2_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.850e-23
Identity = 49/140 (35.00%), Postives = 80/140 (57.14%), Query Frame = 0
Query:    1 VPDGWERNDAEISGR----RKLIVYTSPKNPGTNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEADGVSSRMVNSYTSKNSYVYDYIVDQEGRPEKHIKTIWILFPDQGQ---LATVTAQCNESDYPAVGKSIDALIAS 133
            +P  W R D  I       R+++V+  P +   N F+AYTP + DFTTLG+FG++ +V+KT++P+  GV S+++N    K +Y YDY++   G+P++H+ T++ L    G    LAT T  C E  +  +    D +  S
Sbjct:  127 IPAKWGRTDTTIGTNNLDPRRIVVFKDPSSEA-NVFIAYTPVQPDFTTLGAFGSILDVAKTIVPKGRGVESKLLNYEGRKGAYYYDYVIQPAGQPKRHLTTLFALITISGTGECLATYTTSCLEDQWTVLEPVFDNITKS 265          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5977.14475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSF3_ECTSI4.410e-8386.76PsbP domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835ZDA3_9STRA8.450e-4351.56PsbP domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6V1S113_HETAK1.040e-3948.89Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4EZ64_CHRCT1.980e-3036.55Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S0LK65_9EUKA9.260e-2834.90Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S1XXW5_9STRA2.260e-2639.04Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A0M0J7U2_9EUKA3.810e-2535.14Psbp domain-containing protein chloroplastic-like ... [more]
A0A7S2FED2_9STRA9.740e-2541.32Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8J2SSX2_9STRA1.630e-2336.84Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
W7TLE2_9STRA1.850e-2335.00Psbp domain-containing protein chloroplastic-like ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichGENE3D3.40.1000.10coord: 1..135
e-value: 3.2E-7
score: 32.3
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 1..131
IPR002683PsbP, C-terminalPFAMPF01789PsbPcoord: 1..133
e-value: 1.3E-10
score: 41.7
NoneNo IPR availablePANTHERPTHR31407FAMILY NOT NAMEDcoord: 1..134
NoneNo IPR availablePANTHERPTHR31407:SF17PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTICcoord: 1..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5977contigL-elsbetiae_contig5977:2624..3968 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5977.14475.1mRNA_L-elsbetiae_contig5977.14475.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5977 2624..3968 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5977.14475.1 ID=prot_L-elsbetiae_contig5977.14475.1|Name=mRNA_L-elsbetiae_contig5977.14475.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=138bp
VPDGWERNDAEISGRRKLIVYTSPKNPGTNAFVAYTPARGDFTTLGSFGT
LDEVSKTVLPEADGVSSRMVNSYTSKNSYVYDYIVDQEGRPEKHIKTIWI
LFPDQGQLATVTAQCNESDYPAVGKSIDALIASVAKT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016123Mog1/PsbP_a/b/a-sand
IPR002683PsbP_C