prot_L-elsbetiae_contig5883.14346.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5883.14346.1
Unique Nameprot_L-elsbetiae_contig5883.14346.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length293
Homology
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BLAST of mRNA_L-elsbetiae_contig5883.14346.1 vs. uniprot
Match: D7FHX2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHX2_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 8.620e-47
Identity = 122/253 (48.22%), Postives = 140/253 (55.34%), Query Frame = 0 
Query:   46 GDQVATGSVTLEYMLVPGIPQPSASVAALSTKGAAEQECGEGGPGATAEAEAVALRRNLFPSGGGGGVRAYRMGELKKPA----LLALVGALIAAVLAVRMSGVRDAAFPGLELSPIPVPFKLPAGKYKGSSTHHVRLHDDGNIVVAMGPKXXXXXXXXXXXXXXXXXXXXXXTLWQSGPLRS---DSENSGXXXXXXXXXXXXXXXXNTCKKCQVRVDKGGRVVLVREKEELAAFSPLRAEAFFEVLRPIDK 291
            G QV  GSV LEYMLVPGIPQP   VA +ST+        EG     A       R +    G  GGV +  M ELKKPA    LLA VGA+IAAVLAVR+SGV  A  P  +LSPIPVPFK+  GK+KGSSTHH+RL  DGN+VVA GPK                      TLWQSGPL S     + S              XXX +CKKCQV+V K G + L R +EELA FSP   EAFF++    DK
Sbjct:  120 GSQVPAGSVILEYMLVPGIPQP---VAPVSTET-------EGSLSGLAARTTAPFREDGGNDGSRGGVGSCCMDELKKPARKPALLACVGAVIAAVLAVRLSGVCSARMP-TDLSPIPVPFKVAVGKHKGSSTHHIRLQGDGNVVVARGPKPLLTAGAAAAGDAGA-------TLWQSGPLPSLTQQQQRSPGKPGDNGKDKSGGXXXXSCKKCQVKVTKEGTLALTRGREELAVFSPAWTEAFFDIPPRGDK 354
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5883.14346.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHX2_ECTSI8.620e-4748.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..123
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 145..292
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..144
NoneNo IPR availableTMHMMTMhelixcoord: 126..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5883contigL-elsbetiae_contig5883:2228..6799 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5883.14346.1mRNA_L-elsbetiae_contig5883.14346.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5883 1168..8461 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5883.14346.1 ID=prot_L-elsbetiae_contig5883.14346.1|Name=mRNA_L-elsbetiae_contig5883.14346.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=293bp
MGYKYGTKTIEIETTEIGRAEVMLAEAGGSPNRVHRVTLARTNASGDQVA
TGSVTLEYMLVPGIPQPSASVAALSTKGAAEQECGEGGPGATAEAEAVAL
RRNLFPSGGGGGVRAYRMGELKKPALLALVGALIAAVLAVRMSGVRDAAF
PGLELSPIPVPFKLPAGKYKGSSTHHVRLHDDGNIVVAMGPKPLPLPPPA
DSAKTTAGAGATATTLWQSGPLRSDSENSGGKGTGGGGGGGGGGGGNTCK
KCQVRVDKGGRVVLVREKEELAAFSPLRAEAFFEVLRPIDKR*
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