prot_L-elsbetiae_contig5875.14339.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5875.14339.1
Unique Nameprot_L-elsbetiae_contig5875.14339.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length335
Homology
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BLAST of mRNA_L-elsbetiae_contig5875.14339.1 vs. uniprot
Match: D8LKD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD5_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 1.910e-14
Identity = 116/205 (56.59%), Postives = 124/205 (60.49%), Query Frame = 0 
Query:    9 RRRTESLGCYDHAADPSSPCGPGYRGEEDTRSRGGGGGVGGSGVLGGGTMARSSTDETXXXXXXXXXXXXXXXXXXVGGAPGISLSRARSAGFEPRCEGEGGGDLLEEYDFACQERGQPY---FGGADSGHHQHQSQGLTRSMAAAGEGTGRHGYASSGDEGRSSESXXXXXXXXXXXXXXXXXXXXQEVMNLGLGMNVEPHSLL 210
            RRRTESLGCY +          GY G  D+ S GGG G G                  XXXXXXXXXXXXXXXXXXVGG PGISL+RARSAG E    G    D + E DF CQERGQ       G DS       +   RS++A+       GY SSGDEGRSSE XXXXXXXXXXXXXXXXXXXX   M LGLGMNVEPHSLL
Sbjct:  318 RRRTESLGCYGN---------DGYGGYADSPSYGGGYGYG----------XXXXXXXXXXXXXXXXXXXXXXXXXXVGGGPGISLARARSAGGE--AYGRDDEDFVAELDFVCQERGQQQQQSHDGGDSDGDAVTCRQQARSISAS-------GYGSSGDEGRSSEXXXXXXXXXXXXXXXXXXXXXXXXMGLGLGMNVEPHSLL 494
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5875.14339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKD5_ECTSI1.910e-1456.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5875contigL-elsbetiae_contig5875:2507..11707 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5875.14339.1mRNA_L-elsbetiae_contig5875.14339.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5875 2507..11709 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5875.14339.1 ID=prot_L-elsbetiae_contig5875.14339.1|Name=mRNA_L-elsbetiae_contig5875.14339.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=335bp
FGDDEWRWRRRTESLGCYDHAADPSSPCGPGYRGEEDTRSRGGGGGVGGS
GVLGGGTMARSSTDETQARSGVGGDGGGGSRGMGVGGAPGISLSRARSAG
FEPRCEGEGGGDLLEEYDFACQERGQPYFGGADSGHHQHQSQGLTRSMAA
AGEGTGRHGYASSGDEGRSSESGHGSTSDEGVLAEAGLTLTSQEVMNLGL
GMNVEPHSLLAAAAASQEENTKYIPPGARGKFGGGGGGGKYIPPAMRAAA
AAAAAAAAAGGASGGSSPRPSQNDAEDGGFDLGSMDMDFGFVPSAAGAAP
LTPKTPSFQQPLFPADSNNSGGPASSPLPTPYPAN
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