prot_L-elsbetiae_contig583.14274.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig583.14274.1
Unique Nameprot_L-elsbetiae_contig583.14274.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length258
Homology
BLAST of mRNA_L-elsbetiae_contig583.14274.1 vs. uniprot
Match: D7FJK8_ECTSI (rRNA biogenesis protein RRP36 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJK8_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 3.190e-103
Identity = 194/266 (72.93%), Postives = 214/266 (80.45%), Query Frame = 0
Query:    4 LRKRAEMEPSDDEEGSSDQHGEEGSGYGGSGGEEDGWGDEDGNDHEATTEP-PNAEQEESIGDRLSKLAHGAGPSRRKRHLREESG-EQKPA----VARGKARAGVADEHK-----KGSSRPKAPSRANKNRPQEASSLRAVGRFREVVAGKRKTARDPRFEGGGGSSKLNYDIFRKAYGFLGKYQDSEIEELKKSLKKEKNQERSARLQALLTRLQQERAERSQGDRSRTAVREAKKKERDAVAGGKKPFFLKGSEKKRLSLEQR 258
            +RKRAEM+PSDDE  +    GEE S       + D W DED +++EA TE  PN EQ ESIG+RL KL+HGAGPSRRKRH+R+ +G EQK A     AR + R+G+A   +      GS R K PSRANKNRPQEASS RAVGRFREVV  KRKT+RDPRFEGGGGSSKLNYDIFRKAYGFLG YQDSEIEELKKSLKKEKNQERS RLQALLTRLQQERAERSQGDR+RTA+REAKKKER+AVA GKKPFFLKGSEKKRLSLEQR
Sbjct:    1 MRKRAEMQPSDDEV-NGQSSGEEAS-------DNDSWDDEDLDENEAATEEQPNKEQGESIGERLIKLSHGAGPSRRKRHIRDSTGGEQKQANAAKTARDRTRSGIAAHQQARGGNSGSGRTKVPSRANKNRPQEASSRRAVGRFREVVVTKRKTSRDPRFEGGGGSSKLNYDIFRKAYGFLGTYQDSEIEELKKSLKKEKNQERSGRLQALLTRLQQERAERSQGDRTRTAIREAKKKEREAVASGKKPFFLKGSEKKRLSLEQR 258          
BLAST of mRNA_L-elsbetiae_contig583.14274.1 vs. uniprot
Match: A0A835YP85_9STRA (rRNA biogenesis protein RRP36 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP85_9STRA)

HSP 1 Score: 127 bits (318), Expect = 7.410e-31
Identity = 77/148 (52.03%), Postives = 103/148 (69.59%), Query Frame = 0
Query:  117 PSRANKNRPQEASSLRAVGRFREVVAGKRKTARDPRFEGGGGSSKLNYDIFRKAYGFLGKYQDSEIEELKKSLKKEKNQ------ERSARLQALLTRLQQERAERSQGDRSRTAVREAKKKERDAVAGGKKPFFLKGSEKKRLSLEQR 258
            P RANKN+P E SS RAVGR REVV  +R+ ARDPRF+   G+  LNYD+FRK+Y FL  YQD EI+ L+K   K K +      ER+A  +ALLT++QQERAER + D +R A+ + +K E +AVA GK P+F+K  +++ L+LE R
Sbjct:  175 PKRANKNQPMEMSSKRAVGRHREVVEVRRRRARDPRFDAATGT--LNYDMFRKSYEFLEGYQDGEIDALRKEAAKAKKRRGDGSAERAAAAKALLTKMQQERAERKRADATRAALSQRRKAEAEAVAKGKAPYFMKARDRRALALETR 320          
BLAST of mRNA_L-elsbetiae_contig583.14274.1 vs. uniprot
Match: A0A662WCQ7_9STRA (rRNA biogenesis protein RRP36 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WCQ7_9STRA)

HSP 1 Score: 108 bits (271), Expect = 3.200e-25
Identity = 63/138 (45.65%), Postives = 94/138 (68.12%), Query Frame = 0
Query:  119 RANKNRPQEASSLRAVGRFREVVAGKRKTARDPRFEGGGGSSKLNYDIFRKAYGFLGKYQDSEIEELKKSLKKEKNQERSARLQALLTRLQQERAERSQGDRSRTAVREAKKKERDAVAGGKKPFFLKGSEKKRLSLE 256
            RANKNRP E +S RAVGRF++VV  K++   DPRFE   G  +LN D+F K+Y FL +Y+  E+ ELK+ LK  K+  R   ++  ++   QER+E+ + ++ R A+ + K++ER+AVA GK PF+LK  +KK+L L+
Sbjct:   58 RANKNRPMELTSKRAVGRFKQVVEVKKRRVLDPRFEAQSG--RLNEDLFAKSYSFLDEYKQRELGELKRQLKSAKSTTRKEEIKHEISLRSQERSEKQKTEKIRDALTKRKREEREAVASGKNPFYLKRKDKKKLELQ 193          
BLAST of mRNA_L-elsbetiae_contig583.14274.1 vs. uniprot
Match: A0A397U928_9GLOM (rRNA biogenesis protein RRP36 n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397U928_9GLOM)

HSP 1 Score: 105 bits (261), Expect = 6.890e-24
Identity = 65/139 (46.76%), Postives = 90/139 (64.75%), Query Frame = 0
Query:  119 RANKNRPQEASSLRAVGRFREVVA--GKRKTARDPRFEGGGGSSKLNYDIFRKAYGFLGKYQDSEIEELKKSLKKEKNQERSARLQALLTRLQQERAERSQGDRSRTAVREAKKKERDAVAGGKKPFFLKGSEKKRLSL 255
            R +K+RP E SS + VGRFR+++      +  RDPRF+   G  K N D+F K+Y FL +Y+ SEIEE+KKS+ KEK+ E   +LQ LL +LQ   A  +   R +   RE KKKER+ +A GK PF++K SE+K+L L
Sbjct:   36 RTSKHRPMEISSKKPVGRFRQIIEIPSHIRKRRDPRFDDLSG--KFNEDLFEKSYNFLNEYKRSEIEEIKKSINKEKDPEEKQKLQQLLNKLQSRIAHENNLKRKKELKRERKKKERELIAQGKTPFYIKKSEEKKLEL 172          
BLAST of mRNA_L-elsbetiae_contig583.14274.1 vs. uniprot
Match: A0A3F2RCC1_9STRA (rRNA biogenesis protein RRP36 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RCC1_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.660e-22
Identity = 62/138 (44.93%), Postives = 87/138 (63.04%), Query Frame = 0
Query:  119 RANKNRPQEASSLRAVGRFREVVAGKRKTARDPRFEGGGGSSKLNYDIFRKAYGFLGKYQDSEIEELKKSLKKEKNQERSARLQALLTRLQQERAERSQGDRSRTAVREAKKKERDAVAGGKKPFFLKGSEKKRLSLE 256
            RANKN+P E SS RAVGRFR VV  K++   DPRFE   G  +LN D+F K Y FL  Y+  E++ELK+ LKK K+      L+  +    QE  E+ +    + A+ + K++ER+AVA GK PF+LK  +KK++ L+
Sbjct:   42 RANKNQPLELSSKRAVGRFRNVVEVKKRKVLDPRFEAQSG--RLNEDLFNKTYAFLDDYKQRELQELKQQLKKTKSVTEKEELKHEIALRSQEMKEKQKQQMIQGALTKRKREEREAVASGKNPFYLKRKDKKKVELQ 177          
BLAST of mRNA_L-elsbetiae_contig583.14274.1 vs. uniprot
Match: A0A5D6XT47_9STRA (rRNA biogenesis protein RRP36 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XT47_9STRA)

HSP 1 Score: 100 bits (249), Expect = 8.530e-22
Identity = 61/136 (44.85%), Postives = 88/136 (64.71%), Query Frame = 0
Query:  121 NKNRPQEASSLRAVGRFREVVAGKRKTARDPRFEGGGGSSKLNYDIFRKAYGFLGKYQDSEIEELKKSLKKEKNQERSARLQALLTRLQQERAERSQGDRSRTAVREAKKKERDAVAGGKKPFFLKGSEKKRLSLE 256
            NKNRP E SS R V RF+ VV  K+K   DPRF+   G  +LN D+F K+Y FL +Y+ SE++ELKK L+   +  R   L+  +    QE +E+ + ++ ++A+ + K+ ERDAVA GK PF+LK  +KK+L LE
Sbjct:   82 NKNRPLELSSRRQVSRFKNVVEVKKKKLVDPRFDATTG--RLNEDLFAKSYAFLDEYKQSELQELKKQLRNANSVTRKEELKHEINVRSQELSEKKKSEKIKSALTKRKRDERDAVASGKNPFYLKRKDKKKLELE 215          
BLAST of mRNA_L-elsbetiae_contig583.14274.1 vs. uniprot
Match: A0A7S1TRM6_9STRA (rRNA biogenesis protein RRP36 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRM6_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.460e-21
Identity = 63/138 (45.65%), Postives = 87/138 (63.04%), Query Frame = 0
Query:  121 NKNRPQEASSLRAVGRFREVVAGKRKTARDPRFEGGGGSSKLNYDIFRKAYGFLGKYQDSEIEELKKSLKKEKNQERSARLQALLTRLQQERAERSQGDRSRTAVREAKKKERDAVAGGKKPFFLKGSEKKRLSLEQR 258
            +KNRP E SS + V R REV+  K++  RDPRF+   GS  LNYD+FRK+YGFL +YQ SEI++LKK             + A L +LQQ+R+ER + DR R  V+  K++ R+ V  G K F LK SE +++ LE +
Sbjct:  106 SKNRPLEQSSRKKVSRHREVLQVKKRQIRDPRFDNASGS--LNYDLFRKSYGFLEEYQGSEIDQLKKQXXXXXXXXXXXEITAALQKLQQDRSERERDDRIRGKVQSRKREIRERVRNGGKAFHLKKSELRKIELEDK 241          
BLAST of mRNA_L-elsbetiae_contig583.14274.1 vs. uniprot
Match: A0A367KPF0_RHIST (Ribosomal RNA-processing protein 36 (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367KPF0_RHIST)

HSP 1 Score: 102 bits (253), Expect = 6.660e-21
Identity = 66/142 (46.48%), Postives = 92/142 (64.79%), Query Frame = 0
Query:  119 RANKNRPQEASSLRAVGRFREVVAGKRKTARDPRFEGGGGSSKLNYDIFRKAYGFLGKYQDSEIEELKKSLKKEKNQERSARLQALLTRLQQERAERSQGDRSR--TAVREAKKKERDAVAGGKKPFFLKGSEKKRLSLEQR 258
            R NK+RP E SS +AVGRFR VV  + +  RDPRF+   G+   N D++ K+YGFL +Y  SE+E LK  +KKE++ +    L+ +LTR+    AE++  D+ R    +RE KK+E + V  GKKPFFLK SEK++L L  R
Sbjct:   82 RENKHRPMEMSSKKAVGRFRSVVPLQAEKRRDPRFDKLSGN--FNQDLYEKSYGFLKEYNKSEMEMLKDRIKKERDTDTQENLKMMLTRMVS--AEKTDEDKKRKQNLIRERKKQEAELVKQGKKPFFLKNSEKRKLELMDR 219          
BLAST of mRNA_L-elsbetiae_contig583.14274.1 vs. uniprot
Match: A0A8K1FH79_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FH79_PYTOL)

HSP 1 Score: 97.4 bits (241), Expect = 6.710e-21
Identity = 58/137 (42.34%), Postives = 91/137 (66.42%), Query Frame = 0
Query:  119 RANKNRPQEASSLRAVGRFREVVAGKRKTARDPRFEGGGGSSKLNYDIFRKAYGFLGKYQDSEIEELKKSLKKEKNQERSARLQALLTRLQQERAERSQGDRSRTAVREAKKKERDAVAGGKKPFFLKGSEKKRLSL 255
            RANKN P E +S RAV R R+ V  K+K   DPRFE   G  +LN D+F K+Y FL +Y+ SE++++KK +K+ K++ R   L+  +    Q+ AE+ + ++ +TA+ + K++ER+AVA GK  F+LK  +KK++ L
Sbjct:   51 RANKNCPLEITSKRAVSRHRQAVEVKKKKTVDPRFESTAG--RLNEDLFGKSYAFLDEYKQSELQDMKKQMKRAKSKTRKEELKQEINLRAQDLAEKQKKEKIKTALSKRKREEREAVASGKSAFYLKRKDKKKVEL 185          
BLAST of mRNA_L-elsbetiae_contig583.14274.1 vs. uniprot
Match: A0A835XRM0_9CHLO (rRNA biogenesis protein RRP36 n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XRM0_9CHLO)

HSP 1 Score: 99.4 bits (246), Expect = 8.450e-21
Identity = 74/142 (52.11%), Postives = 89/142 (62.68%), Query Frame = 0
Query:  119 RANKNRPQEASSLRAVGRFREVVAGKRKTARDPRFEGGGGSSKLNYDIFRKAYGFLGKYQDS---EIEELKKSLKKEKNQERSARLQALLTRLQQERAERSQGDRSRTAVREA--KKKERDAVAGGKKPFFLKGSEKKRLSL 255
            R NK+RPQE SS R VGRFREV+    K  RDPRF+   G      D FR+ Y FL  Y ++   E EEL+  LKKEKN +  AR+QA L R+  + A R +G R RTA  E   K KE+ AVAGGK PFFLK ++KKRL L
Sbjct:  150 RDNKDRPQEMSSKRPVGRFREVIQVPHKETRDPRFDSTSGPPPT--DAFRRNYAFL--YNETLPAEKEELRAKLKKEKNPKFKARIQAQLQRV--DGALREEGLRRRTAKLETEWKTKEKQAVAGGKNPFFLKDADKKRLQL 285          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig583.14274.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJK8_ECTSI3.190e-10372.93rRNA biogenesis protein RRP36 n=2 Tax=Ectocarpus T... [more]
A0A835YP85_9STRA7.410e-3152.03rRNA biogenesis protein RRP36 n=1 Tax=Tribonema mi... [more]
A0A662WCQ7_9STRA3.200e-2545.65rRNA biogenesis protein RRP36 n=2 Tax=Nothophytoph... [more]
A0A397U928_9GLOM6.890e-2446.76rRNA biogenesis protein RRP36 n=2 Tax=Gigaspora Ta... [more]
A0A3F2RCC1_9STRA3.660e-2244.93rRNA biogenesis protein RRP36 n=3 Tax=Phytophthora... [more]
A0A5D6XT47_9STRA8.530e-2244.85rRNA biogenesis protein RRP36 n=1 Tax=Pythium bras... [more]
A0A7S1TRM6_9STRA1.460e-2145.65rRNA biogenesis protein RRP36 n=1 Tax=Phaeomonas p... [more]
A0A367KPF0_RHIST6.660e-2146.48Ribosomal RNA-processing protein 36 (Fragment) n=1... [more]
A0A8K1FH79_PYTOL6.710e-2142.34Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A835XRM0_9CHLO8.450e-2152.11rRNA biogenesis protein RRP36 n=1 Tax=Edaphochlamy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 182..214
IPR009292rRNA biogenesis protein RRP36PFAMPF06102RRP36coord: 119..257
e-value: 8.7E-37
score: 126.6
IPR009292rRNA biogenesis protein RRP36PANTHERPTHR21738UNCHARACTERIZEDcoord: 85..257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig583contigL-elsbetiae_contig583:31226..35428 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig583.14274.1mRNA_L-elsbetiae_contig583.14274.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig583 31226..35428 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig583.14274.1 ID=prot_L-elsbetiae_contig583.14274.1|Name=mRNA_L-elsbetiae_contig583.14274.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=258bp
MARLRKRAEMEPSDDEEGSSDQHGEEGSGYGGSGGEEDGWGDEDGNDHEA
TTEPPNAEQEESIGDRLSKLAHGAGPSRRKRHLREESGEQKPAVARGKAR
AGVADEHKKGSSRPKAPSRANKNRPQEASSLRAVGRFREVVAGKRKTARD
PRFEGGGGSSKLNYDIFRKAYGFLGKYQDSEIEELKKSLKKEKNQERSAR
LQALLTRLQQERAERSQGDRSRTAVREAKKKERDAVAGGKKPFFLKGSEK
KRLSLEQR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009292RRP36