prot_L-elsbetiae_contig5804.14239.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5804.14239.1
Unique Nameprot_L-elsbetiae_contig5804.14239.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length666
Homology
BLAST of mRNA_L-elsbetiae_contig5804.14239.1 vs. uniprot
Match: D7FGR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGR2_ECTSI)

HSP 1 Score: 557 bits (1435), Expect = 6.380e-188
Identity = 367/708 (51.84%), Postives = 421/708 (59.46%), Query Frame = 0
Query:    1 MQPSDIHFAAVWPTAHDGTGRKVVVPFQCSLADASKTVGCLAA--QRHSPATSMSAIETSAVGSYCVFSTPTSTPPALIVVGTKSWSCAPSVFALIRRVQADLARDQVEFGYWQLRHLALRPETVALPPGSDDGSYAMPPRLFKEHDWDDEESETWEDEDMWSG-TVGADDLARPPATPESPRAAPPSHVVSKPQRYGEHLDHIELCRSSRDTDPPNVSATHTPKHEQGTSQVPVMQPDFIDENLIAQQXXXXXXXXXXXXXDPAPVGIGLAPVLVHRRTSQSVDHGGGGSPLV------PTQADASQGPDTLD------PSAEVGAKSPALLAVDVSPSSAKGEARGFQLPAAPSLPMLGKPAQEAPFDAAXXXXXXXXXXEAPTPVVAPXXAV------------AGGTGVE------------------VVGLTASPQGEAGVSAADEAANTTTTVSAAVSEDLAYVHRGSVLQSYGITGSVLVAASHGARARLRVTDRQGHIANLTANAAVAAENTASSVLPTREYLCKAGAVQPAGEPPKFLPTLMYRCSPAVKVLPVRVTCRLRSVGNSVLVSVQVIANPQLSQPLGGVSVLVNLPFSPRNEEGDVKSEPPATLKADRRMLEWALPLKIKPGGKLVAQARLSVDDAQVRLAAIPQTAPAMVRCHLLDSTFSSVELEMTATAEEGEQNVPGKVVKRCRVQCKQ 663
            M P DIHFAAVWP A DG  RKV+VP QCSLA+AS+TVG L    ++  P    S IET A+G +CVFST TSTPPAL+VVGTKSW C+P VFA +RRVQ DLARD  +FG+WQLRHLA R E  +L P  DD SYAMPPRLF+  +WDDEESE+WEDE MWS  TV  D L    A P+  R   P  V    +  G  +    L  S  D       AT T +H  G +   +     + + L  +                 P G G    +V RR S   D G   SPL+      P  A A      LD      PSA+    SP L +   S S+   E  G Q  +A  L  L   + +  F+A           + P+ VV P   V             G TG++                    G TA  Q   G  A  E      TVSAAVSEDLAYVHRG  LQSYGITGSVLVAAS GARA++RVTD+QGHIA  TA   VA E  A ++  TREYLCK GAVQ  G PP+FLP LMYRCSPAVKVLPVRVTCRLR+ GN VLV VQVIANPQLS PL GV VLVNLPFSPR +EGDVKSEPPA+LK DR+MLEW LP  ++ GGK V QARLS D+ QVR+AAIPQTAPAMV+CHLLDSTFSSVELE+ A AEEG     G VVKRCRVQCKQ
Sbjct:    1 MLPGDIHFAAVWPAAPDGAARKVIVPLQCSLAEASRTVGNLVGLPRKQPPTPGASKIETLALGPFCVFSTSTSTPPALVVVGTKSWGCSPGVFAFLRRVQTDLARDPSDFGFWQLRHLASRVE-ASLHPAGDDASYAMPPRLFEGRNWDDEESESWEDEYMWSDETVDNDGLTGATAVPDDARDMSPVPVSEPLRSDGVSMALSPLTVSQPDDANARTGATKT-EHTTGQADEGIPLNKMVFDGLPPKAPHRPTKPMTTDQRTQQPSGPGFGSPVVDRRPSPVGDRG---SPLLIPAEQAPALATAQPASPNLDADKLLPPSAKGAGFSP-LRSDGESSSATPDEVSGLQAVSAIDLSALTTSSMKGRFNAPVG--------DQPSTVVGPAAVVKETVDGARTGVPGGETGIQPAAEPHAISPQVDALAAAATGTTADLQDRVG-DAGPETEPDNATVSAAVSEDLAYVHRGPDLQSYGITGSVLVAASCGARAQVRVTDKQGHIATATAYPNVAEEKPAMAIPSTREYLCKPGAVQHGGAPPRFLPALMYRCSPAVKVLPVRVTCRLRTAGNRVLVWVQVIANPQLSHPLSGVLVLVNLPFSPR-DEGDVKSEPPASLKMDRKMLEWVLPSGMQRGGKQVLQARLSADEGQVRVAAIPQTAPAMVKCHLLDSTFSSVELEVAALAEEGVAPAGGSVVKRCRVQCKQ 692          
BLAST of mRNA_L-elsbetiae_contig5804.14239.1 vs. uniprot
Match: A0A6H5JKK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKK0_9PHAE)

HSP 1 Score: 436 bits (1120), Expect = 1.330e-141
Identity = 301/596 (50.50%), Postives = 348/596 (58.39%), Query Frame = 0
Query:  104 DQVEFGYWQLRHLALRPETVALPPGSDDGSYAMPPRLFKEHDWDDEESETWEDEDMWSG-TVGADDLARPPATPESPRAAPPSHVVSKPQRYGEHLDHIELCRSSRDTDPPNVSATHTPKHEQGTSQVPVMQPDFIDENLIAQQXXXXXXXXXXXXXDPAPVGIGLAPVLVHRRTSQSVDHGGGGSPLV--PTQA---------DASQGPDTLDPSAEVGAKSPALLAVDVSPSSAKGEARGFQLPAAPSLPMLGKPAQEAPFDAAXXXXXXXXXXEAPTPVV------APXXAVAGGTGVE------------------VVGLTASPQGEAGVSAADEAANTTTTVSAAVSEDLAYVHRGSVLQSYGITGSVLVAASHGARARLRVTDRQGHIANLTANAAVAAENTASSVLPTREYLCKAGAVQPAGEPPKFLPTLMYRCSPAVKVLPVRVTCRLRSVGNSVLVSVQVIANPQLSQPLGGVSVLVNLPFSPRNEEGDVKSEPPATLKADRRMLEWALPLKIKPGGKLVAQARLSVDDAQVRLAAIPQTAPAMVRCHLLDSTFSSVELEMTATAEEGEQNVPGKVVKRCRVQCKQ 663
            D  +FG+WQLRHLALR E  +L P  DD SYAMPPRLF+  +WDDEESE+WEDE MWS  TV  D L    A P+  +   P   VS+P R       +     S+  D   ++     +H  G +   V       + L  +                 P G G    +V RR S     G  GSPL+  P QA         +A+   D L P + +GA    L +   SPS+   E  G Q  +A  L  L   + E  F+A             PT VV      AP     G TG++                    G  A  Q   G S A+   +    VSAAVSEDLAYVHRG  LQSYGITGSVLVAAS GARA++RVTD+QGHIA  TAN  VA E  A +V PTREYLCK GAVQ  G PP+FLP LMYRCSPAVKVLPVRVTCRLR+ GN VLV VQVIANPQL QPL GVSVLVNLPFSPR +EGDVKSEPPATLK DR+MLEW LP  ++ GGK V QARLS D+ QVR+AAIPQTAPAMV+CHLLDSTFSSVELE+ A A+EG     G VVKRCRVQCKQ
Sbjct:   32 DASDFGFWQLRHLALRVE-ASLSPAGDDASYAMPPRLFEGRNWDDEESESWEDEYMWSDETVDNDGLTGVTAVPDDAKDMSPV-PVSEPLRSDGVSMALSPLTVSQPEDANTLTGVTRTEHATGHADEGVSLNKMFFDGLPPKAPHRPTKPMMTDQRTQQPSGPGFGSPVVGRRPSPV---GYRGSPLLIPPDQAPALAMAQPANANVDADKLLPPSAMGAGFSPLRSDGESPSATPDEVSGLQGGSAVDLSTLTTSSMEGRFNAVVGDEPSTVVG--PTTVVKETVDGAPTGVPGGETGIQPAAEPHAISPQVDSLPAAATGTKAGLQDRVGDSGAETEPDNAM-VSAAVSEDLAYVHRGPELQSYGITGSVLVAASCGARAQVRVTDKQGHIATATANPNVAEEKPAIAVPPTREYLCKPGAVQHGGAPPRFLPALMYRCSPAVKVLPVRVTCRLRTAGNRVLVWVQVIANPQLPQPLSGVSVLVNLPFSPR-DEGDVKSEPPATLKTDRKMLEWVLPSGMQQGGKQVLQARLSADEGQVRVAAIPQTAPAMVKCHLLDSTFSSVELEVAALAKEGVAPAVGSVVKRCRVQCKQ 618          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5804.14239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FGR2_ECTSI6.380e-18851.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKK0_9PHAE1.330e-14150.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028565Mu homology domainPROSITEPS51072MHDcoord: 409..665
score: 8.929

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5804contigL-elsbetiae_contig5804:5515..9037 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5804.14239.1mRNA_L-elsbetiae_contig5804.14239.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5804 5515..9037 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5804.14239.1 ID=prot_L-elsbetiae_contig5804.14239.1|Name=mRNA_L-elsbetiae_contig5804.14239.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=666bp
MQPSDIHFAAVWPTAHDGTGRKVVVPFQCSLADASKTVGCLAAQRHSPAT
SMSAIETSAVGSYCVFSTPTSTPPALIVVGTKSWSCAPSVFALIRRVQAD
LARDQVEFGYWQLRHLALRPETVALPPGSDDGSYAMPPRLFKEHDWDDEE
SETWEDEDMWSGTVGADDLARPPATPESPRAAPPSHVVSKPQRYGEHLDH
IELCRSSRDTDPPNVSATHTPKHEQGTSQVPVMQPDFIDENLIAQQQQQQ
QQQQQQQRRDPAPVGIGLAPVLVHRRTSQSVDHGGGGSPLVPTQADASQG
PDTLDPSAEVGAKSPALLAVDVSPSSAKGEARGFQLPAAPSLPMLGKPAQ
EAPFDAAAAAAAAAAGGEAPTPVVAPPAAVAGGTGVEVVGLTASPQGEAG
VSAADEAANTTTTVSAAVSEDLAYVHRGSVLQSYGITGSVLVAASHGARA
RLRVTDRQGHIANLTANAAVAAENTASSVLPTREYLCKAGAVQPAGEPPK
FLPTLMYRCSPAVKVLPVRVTCRLRSVGNSVLVSVQVIANPQLSQPLGGV
SVLVNLPFSPRNEEGDVKSEPPATLKADRRMLEWALPLKIKPGGKLVAQA
RLSVDDAQVRLAAIPQTAPAMVRCHLLDSTFSSVELEMTATAEEGEQNVP
GKVVKRCRVQCKQQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028565MHD