prot_L-elsbetiae_contig5800.14233.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5800.14233.1
Unique Nameprot_L-elsbetiae_contig5800.14233.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length556
Homology
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BLAST of mRNA_L-elsbetiae_contig5800.14233.1 vs. uniprot
Match: D8LBB1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBB1_ECTSI)

HSP 1 Score: 387 bits (994), Expect = 4.190e-125
Identity = 282/580 (48.62%), Postives = 337/580 (58.10%), Query Frame = 0 
Query:   26 SRAASDASSDWGDWADKQVAQGEPPGDMTLEAVGEGG----------AVDSSGTNEDDQWVLQQMEQP---SAVLGADNRAWDYVLQQIVLDEREEASEAATVASPVQEIRGAAATEFVSRWLRSNLPIALPSLNALGLI-----------------ATQTRPGSAGRAVVDSVAAPSAVAVASCSPEQSMHRVNLFSLGANAGSALAAALVQPGAVGLLA---AAAASRENAKIEAFSAAITTAS--ELSEARPDGVRAQSRRGVIFESLDSRIHMGSLVSAMGRLGLGARYRSRSGLWRLRPGAVLLPTAESNVRIGRVVPAPLALEDARFVARCCGLPPGGALPTSERVSGAEALVRGLIRRNPSAGIRRGGQLVAWCLSFDNGLAGALHVDQAHPPFPSSSSSPSSLQSVEREG--EGGGSSPQDLVLALLASLLIQP-----SEAKLPIVRDNSNGGSSAPFGVEGGGARVSTTQYQPDILDSSAQR--------KAGLVAVVIDDESPFVGLFQELDLLERVCDADWVRFDPVAHRASSGSGSRAVVVDGDDNSIGLSAGGPLELPLAALVMQP 555
            SRA S+ASSDW DWAD  VAQGEPPG+                    AVD     +D++WV   MEQ    S + G ++ AWDYVLQ +V +ERE    AATV SPVQEI G AATEFVSRWLRSNLPI LP+LNAL LI                   + R    GRA+ DSVA PS+VAV SCSPEQ MHRVNLFSL AN+G+ALAAA+VQPGAVGLL     AAA  E      +++  T  S  E+S  R  G    S RGV+FESLDSRI   +LVS M RLGLG + RSRSG+W+LRPGAVL P  ++++    V   P+ LED   +ARCC    G        V  +EALVRGLI RNPSAGIRRG QLVAWCLSFDNGLAGAL++     P  + S  P  +      G  E G  SP+++VLALL SLL +P     +    P  R +     S         A  ST + Q  +  SS             GL AVV+DD+SPFVGLF EL+LLERVCDADWVRF+P+   +S  SG+ AVV                 +PL+ALV+ P
Sbjct:   17 SRADSNASSDWDDWADAMVAQGEPPGESAXXXXXXXXXXXXXXXXXMAVDE----QDEEWVRSLMEQGTVGSVIEGMESPAWDYVLQMVV-EERERGG-AATVESPVQEITGVAATEFVSRWLRSNLPITLPALNALKLIEGGCAQQHQRIGSRSGDGQEQRRVRGGRALADSVAEPSSVAVVSCSPEQGMHRVNLFSLSANSGAALAAAVVQPGAVGLLVPPVGAAALGEETVARGYNSNDTRGSSGEVSGRRSTGPGC-SDRGVVFESLDSRILEDALVSTMRRLGLGLKKRSRSGMWKLRPGAVL-PAGDTSITSAEV--RPVTLEDVGLIARCCSSGLG-------EVGRSEALVRGLIGRNPSAGIRRGSQLVAWCLSFDNGLAGALYIA----PQTTESGLPLPILPPLASGGQEEGQFSPRNMVLALLGSLLARPPGTDRAANNTPTARTDDEATRSV------SDAASSTEEKQVGLSGSSLAHGRGAGGGVSVGLEAVVVDDDSPFVGLFGELELLERVCDADWVRFEPLTSCSSGASGAPAVVAP---------------VPLSALVLNP 554
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5800.14233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBB1_ECTSI4.190e-12548.62Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5800contigL-elsbetiae_contig5800:972..5097 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5800.14233.1mRNA_L-elsbetiae_contig5800.14233.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5800 954..5364 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5800.14233.1 ID=prot_L-elsbetiae_contig5800.14233.1|Name=mRNA_L-elsbetiae_contig5800.14233.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=556bp
MSPPLTPNQNKDEEDGMDVVSPGRESRAASDASSDWGDWADKQVAQGEPP
GDMTLEAVGEGGAVDSSGTNEDDQWVLQQMEQPSAVLGADNRAWDYVLQQ
IVLDEREEASEAATVASPVQEIRGAAATEFVSRWLRSNLPIALPSLNALG
LIATQTRPGSAGRAVVDSVAAPSAVAVASCSPEQSMHRVNLFSLGANAGS
ALAAALVQPGAVGLLAAAAASRENAKIEAFSAAITTASELSEARPDGVRA
QSRRGVIFESLDSRIHMGSLVSAMGRLGLGARYRSRSGLWRLRPGAVLLP
TAESNVRIGRVVPAPLALEDARFVARCCGLPPGGALPTSERVSGAEALVR
GLIRRNPSAGIRRGGQLVAWCLSFDNGLAGALHVDQAHPPFPSSSSSPSS
LQSVEREGEGGGSSPQDLVLALLASLLIQPSEAKLPIVRDNSNGGSSAPF
GVEGGGARVSTTQYQPDILDSSAQRKAGLVAVVIDDESPFVGLFQELDLL
ERVCDADWVRFDPVAHRASSGSGSRAVVVDGDDNSIGLSAGGPLELPLAA
LVMQP*
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