prot_L-elsbetiae_contig580.14229.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig580.14229.1
Unique Nameprot_L-elsbetiae_contig580.14229.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length90
Homology
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BLAST of mRNA_L-elsbetiae_contig580.14229.1 vs. uniprot
Match: D7FW37_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW37_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 7.170e-19
Identity = 52/89 (58.43%), Postives = 61/89 (68.54%), Query Frame = 0 
Query:    1 MVCNPRRRGGINYAADSAEARWAAEAAAEACRQETA--KADRREAEVGAEMLRMMKMWSFKEGQGAPAVAGGANGHGEANAGQQAVAAQ 87
            +  NPRRRGGINYAADSAEA+WAA AAA+ CR++T    +  +EAEVGAEMLRMMKMWSF             NG  EA+AGQ+A   Q
Sbjct:   14 VFVNPRRRGGINYAADSAEAKWAAGAAAQPCREDTRGRMSVDQEAEVGAEMLRMMKMWSF-------------NGGAEAHAGQEAPVGQ 89
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig580.14229.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FW37_ECTSI7.170e-1958.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig580contigL-elsbetiae_contig580:5134..5969 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig580.14229.1mRNA_L-elsbetiae_contig580.14229.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig580 5110..6154 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig580.14229.1 ID=prot_L-elsbetiae_contig580.14229.1|Name=mRNA_L-elsbetiae_contig580.14229.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=90bp
MVCNPRRRGGINYAADSAEARWAAEAAAEACRQETAKADRREAEVGAEML
RMMKMWSFKEGQGAPAVAGGANGHGEANAGQQAVAAQLH*
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