prot_L-elsbetiae_contig577.14181.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig577.14181.1
Unique Nameprot_L-elsbetiae_contig577.14181.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length391
Homology
BLAST of mRNA_L-elsbetiae_contig577.14181.1 vs. uniprot
Match: A0A6H5J5V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5V9_9PHAE)

HSP 1 Score: 374 bits (959), Expect = 2.450e-122
Identity = 236/404 (58.42%), Postives = 268/404 (66.34%), Query Frame = 0
Query:    5 TGASSLRRRTRVLSSTSSITSPPPTCSPLLLARGLGVGSACRSKTGIFVAAASRWQDNGDEDDXGXD----TRRARRGRKPLRAPWEDIQWSNPRT----KDARGRERLEWED--KEEEYEDALGPGDRRRRRVNQRDXXXXXXXXXXXXXXXXXGRVDDLGTETIPSGWDASGWFSGAQQANQGGLFDWARSFYNTLFWYGGASSEDTDELPAMNFQDLLERYDLPAVEQSLQSSARPRPIVPPENLAAEQDFRWRPSGRDSAA-ARATGERTSRRRGKPRSSSINGGVAGSSKRRARRDRDRQP------EREEGEEFARSREGRRVARGPGGSGSRGDAAAIGQLRRKQRQLADREHKCEVDLEKVRERLDVVDATVELWMRRSAGMLSRGGSETDADMLQ 391
            TG+SS RR++R         S P +CSPL+L    G   AC    G+  A ASRW  +GDE D G D     RRA R RKPLRAPWEDIQWSNP      + ARG ER+ W+D   EEE E+ LG  D  R  V  R                     DD+  E +P+GWD + WF+GAQ+ANQGGL++WARSFYNTLFWYGGASSE  DELPAMNFQDLLER+DLPA EQS   SARPRPIVPPE+LAAEQDFRWRPSGR++   A AT E T+  R K R S+ +GG  GSS+RRARR+RD +        R E E  A    GRR        G  GD  AIGQLRRKQRQLA+REHKCEVDLEKVR+RLDVVDATVELWMRRSAGMLSRGGSETD D+LQ
Sbjct:   42 TGSSSTRRQSR---------SRPRSCSPLVLGSD-GGSRACGGDVGLIAATASRWGADGDELDGGNDGKDRRRRAER-RKPLRAPWEDIQWSNPSNPSSRRAARGGERVAWKDVDDEEEEEEMLGLEDGSRSMVQPRGYTRSYDDADVDTRPRRRRSRDDIDAEPVPTGWDTAQWFTGAQEANQGGLYEWARSFYNTLFWYGGASSEGEDELPAMNFQDLLERFDLPAGEQS---SARPRPIVPPEDLAAEQDFRWRPSGREATGGATATAESTNWSRAKGRGSTASGGATGSSRRRARRERDERDLDWESVGRAEREMHAAGGRGRREG------GDDGDVVAIGQLRRKQRQLAEREHKCEVDLEKVRDRLDVVDATVELWMRRSAGMLSRGGSETDTDVLQ 425          
BLAST of mRNA_L-elsbetiae_contig577.14181.1 vs. uniprot
Match: D8LRJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRJ5_ECTSI)

HSP 1 Score: 295 bits (754), Expect = 3.900e-95
Identity = 166/243 (68.31%), Postives = 192/243 (79.01%), Query Frame = 0
Query:  153 DDLGTETIPSGWDASGWFSGAQQANQGGLFDWARSFYNTLFWYGGASSEDTDELPAMNFQDLLERYDLPAVEQSLQSSARPRPIVPPENLAAEQDFRWRPSGRDSAA-ARATGERTSRRRGKPRSSSINGGVAGSSKRRARRDRDRQPERE-EGEEFARSREGRRVARGPGGSGSR--GDAAAIGQLRRKQRQLADREHKCEVDLEKVRERLDVVDATVELWMRRSAGMLSRGGSETDADMLQ 391
            D +  E +P+GWD + WFSGAQ+ANQGGL++WARSFYNTLFWYGGASSED DELPAMNFQDLLER+DLPA EQS   S RPRPIVPPE+LAAEQDF W+PSGR++   A A  E T+R R K R S+++GG   S++RRARR+R+   ER+ + E   R+    R A G G    R  GD  AIGQLRRKQRQLA+REHKCEVDLEKVR+RLDVVDATVELWMRRSAGMLSRGGSETD D+LQ
Sbjct:   37 DGIDAEPVPTGWDTAQWFSGAQEANQGGLYEWARSFYNTLFWYGGASSEDEDELPAMNFQDLLERFDLPAGEQS---STRPRPIVPPEDLAAEQDFLWQPSGREATGGATAAAEGTNRSRSKDRGSTVSGGATRSTRRRARRERE---ERDLDWENVGRAEREMRAAGGRGRREGRDDGDVVAIGQLRRKQRQLAEREHKCEVDLEKVRDRLDVVDATVELWMRRSAGMLSRGGSETDTDVLQ 273          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig577.14181.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J5V9_9PHAE2.450e-12258.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRJ5_ECTSI3.900e-9568.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig577contigL-elsbetiae_contig577:17949..22385 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig577.14181.1mRNA_L-elsbetiae_contig577.14181.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig577 17949..22385 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig577.14181.1 ID=prot_L-elsbetiae_contig577.14181.1|Name=mRNA_L-elsbetiae_contig577.14181.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=391bp
HASPTGASSLRRRTRVLSSTSSITSPPPTCSPLLLARGLGVGSACRSKTG
IFVAAASRWQDNGDEDDDGDDTRRARRGRKPLRAPWEDIQWSNPRTKDAR
GRERLEWEDKEEEYEDALGPGDRRRRRVNQRDFDDYDDDDDDDRPRRRRG
RVDDLGTETIPSGWDASGWFSGAQQANQGGLFDWARSFYNTLFWYGGASS
EDTDELPAMNFQDLLERYDLPAVEQSLQSSARPRPIVPPENLAAEQDFRW
RPSGRDSAAARATGERTSRRRGKPRSSSINGGVAGSSKRRARRDRDRQPE
REEGEEFARSREGRRVARGPGGSGSRGDAAAIGQLRRKQRQLADREHKCE
VDLEKVRERLDVVDATVELWMRRSAGMLSRGGSETDADMLQ
back to top