prot_L-elsbetiae_contig5766.14176.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5766.14176.1
Unique Nameprot_L-elsbetiae_contig5766.14176.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length194
Homology
BLAST of mRNA_L-elsbetiae_contig5766.14176.1 vs. uniprot
Match: D7FVU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU7_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 2.300e-75
Identity = 117/148 (79.05%), Postives = 129/148 (87.16%), Query Frame = 0
Query:   46 DKRNKFVVVGLRGASVRKNARLDSPVLKMLRRGTVVVVSEVRHRRAHIVKPLEGWASLSTEDGYQIIEPTKRSTLYKVVYEDGIIVRSTASIESGTVVKIATPGSTLKATGRTQILDGIERVQIDSGWVSMRLREDKGLGARLLAPLN 193
            + R+KFVVVGL+GASVRK  RLDSP+L+ LRRGTVV VSEVR RRAHIVKP+ GWASLSTEDGY IIEPTKR + YKVVY DGIIVRSTA IE+G VVKI  PG  LKATG+TQILDG+ERVQIDSGWVSMRLRED G+GARLLAP+ 
Sbjct:    3 ENRDKFVVVGLKGASVRKELRLDSPILRTLRRGTVVSVSEVRQRRAHIVKPVNGWASLSTEDGYGIIEPTKRCSRYKVVYNDGIIVRSTAKIETGEVVKIVHPGDILKATGKTQILDGVERVQIDSGWVSMRLREDNGVGARLLAPMK 150          
BLAST of mRNA_L-elsbetiae_contig5766.14176.1 vs. uniprot
Match: D7FVU8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVU8_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 1.630e-63
Identity = 107/183 (58.47%), Postives = 129/183 (70.49%), Query Frame = 0
Query:   11 CVDDGATKQRDQERVEYNCFCFPAGGEDEAVFIPDDKRNKFVVVGLRGASVRKNARLDSPVLKMLRRGTVVVVSEVRHRRAHIVKPLEGWASLSTEDGYQIIEPTKRSTLYKVVYEDGIIVRSTASIESGTVVKIATPGSTLKATGRTQILDGIERVQIDSGWVSMRLREDKGLGARLLAPLN 193
            CVDD AT                     E VF+PD  RNK+ VVGL GA+VR  ARLDSPVL+ L +GTVVVV++VR RRAHI+KP++GWASLSTE GY I+E   R T YKVVY +GI VRS+ SIE G +V+IA  G+ LKATG+T+I D +ERV+++ GWVSMRLREDKG GA LL  LN
Sbjct:   42 CVDDSAT---------------------ERVFVPDASRNKYQVVGLGGATVRMTARLDSPVLRTLPQGTVVVVAQVRSRRAHIIKPMDGWASLSTESGYVILEAIARPTKYKVVYREGIFVRSSPSIEDGRIVRIAPCGTVLKATGKTEIFDAVERVEVEDGWVSMRLREDKGSGAPLLMALN 203          
BLAST of mRNA_L-elsbetiae_contig5766.14176.1 vs. uniprot
Match: D7G246_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G246_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 2.560e-48
Identity = 92/156 (58.97%), Postives = 119/156 (76.28%), Query Frame = 0
Query:   39 EAVFIPDDKRNKFVVVGLRGASVRKNARLDSPVLKMLRRGTVVVVSEVRHRRAHIVKPLEGWASLSTEDGYQIIEPT-KRSTLYKVVYEDGIIVRSTASIESGTVVKIATPGSTLKATGRTQILDGIERVQIDSGWVSMRLREDKGLGARLLAPLN 193
            E VFIP   RNK+VVVGL GA+VR + RLDSPVL+ L +GTVV V+++R RRAHIVKP++GWASLST   Y+I+EP   +ST YKV+Y +GI VR   S+ES  + +IA  G+ LKATGRT+I D +ER++++ GWVSMRLR D G  A LL+PL+
Sbjct:  394 ERVFIPKASRNKYVVVGLVGATVRVSKRLDSPVLRTLPKGTVVEVAQIRSRRAHIVKPIDGWASLSTVSSYRILEPPITQSTKYKVIYPEGIFVRRMVSLESR-IARIAPFGTVLKATGRTEIYDAVERIEVEDGWVSMRLRNDTG--APLLSPLD 546          
BLAST of mRNA_L-elsbetiae_contig5766.14176.1 vs. uniprot
Match: A0A835YRV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRV6_9STRA)

HSP 1 Score: 108 bits (270), Expect = 5.860e-24
Identity = 56/128 (43.75%), Postives = 83/128 (64.84%), Query Frame = 0
Query:   50 KFVVVGLRGASVRKNARLDSPVLKMLRRGTVVVVSEVRHRRAHIVKPLEGWASLSTEDGYQIIEPTKRST-LYKVVYEDGIIVRSTASIESGTVVKIATPGSTLKATGRTQILDGIERVQIDSGWVSM 176
            +F VVG  GA+VR    LDSP+L  L  GT+V V  V+ RR  IV+P++GWAS STE GY I+E    +   Y+VV+ +G++VR+ A  ++   V++   G  ++ TG    ++G+ERV+ID GWVS+
Sbjct:   30 QFRVVGRSGATVRGGENLDSPLLCTLSPGTLVTVDLVKGRRCRIVEPVKGWASTSTEKGYVIVERVDSARPRYRVVFSEGVVVRTAADPDNSEPVRLLPSGEIIEGTGEVVSVEGVERVRIDDGWVSV 157          
BLAST of mRNA_L-elsbetiae_contig5766.14176.1 vs. uniprot
Match: A0A7S2Y0S5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0S5_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 3.020e-21
Identity = 52/146 (35.62%), Postives = 82/146 (56.16%), Query Frame = 0
Query:   59 ASVRKNARLDSPVLKMLRRGTVVVVSEVRHR----------------------RAHIVKPLEGWASLSTEDGYQIIEPTKRSTL-YKVVYEDGIIVRSTASIESGTVVKIATPGSTLKATGRTQILDGIERVQIDSGWVSMRLRED 181
            A+VR    L+S ++++L RGT+V V E+R                        RA I+ P+EGW SL ++ G  ++E      + Y+V+Y DGI+VR+ A+I+ G +V+    G  ++ATG +   +G+ER+QI  GW+S  LRED
Sbjct:    1 ATVRTQEFLNSSIVQILPRGTIVEVCEIRESPNNLQPHDFNPLMLKTECTTRGRARILSPVEGWVSLQSDSGAALLEKLGEVKMKYRVIYPDGIVVRNKANIDQGRIVRSLEYGEIVEATGESIFYEGVERIQIADGWISRNLRED 146          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5766.14176.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FVU7_ECTSI2.300e-7579.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FVU8_ECTSI1.630e-6358.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G246_ECTSI2.560e-4858.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YRV6_9STRA5.860e-2443.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2Y0S5_9STRA3.020e-2135.62Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..193
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..18
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.473

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5766contigL-elsbetiae_contig5766:851..7023 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5766.14176.1mRNA_L-elsbetiae_contig5766.14176.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5766 352..7032 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5766.14176.1 ID=prot_L-elsbetiae_contig5766.14176.1|Name=mRNA_L-elsbetiae_contig5766.14176.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=194bp
MSWRLLALLACVDDGATKQRDQERVEYNCFCFPAGGEDEAVFIPDDKRNK
FVVVGLRGASVRKNARLDSPVLKMLRRGTVVVVSEVRHRRAHIVKPLEGW
ASLSTEDGYQIIEPTKRSTLYKVVYEDGIIVRSTASIESGTVVKIATPGS
TLKATGRTQILDGIERVQIDSGWVSMRLREDKGLGARLLAPLN*
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