prot_L-elsbetiae_contig576.14170.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig576.14170.1
Unique Nameprot_L-elsbetiae_contig576.14170.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length506
Homology
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BLAST of mRNA_L-elsbetiae_contig576.14170.1 vs. uniprot
Match: D7FZ90_ECTSI (Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ90_ECTSI)

HSP 1 Score: 329 bits (844), Expect = 3.540e-96
Identity = 269/439 (61.28%), Postives = 301/439 (68.56%), Query Frame = 0 
Query:   22 DVVDLSTMDNGEKSGSDGSPS--ANVKPEKQGXXXXXXXXXXPNDDADARKRDQRARAAERXXXXXXXXXXXXEAQENKPTAADMATDKLPPLRVAINSPGMGWLQPVRKPSQGVVGASGGXXXXXXXXXXXSPAATXXXXXXXXXXXXXXXXXXXXXXAA-SPEARARIDRVTTAADALAAKVTSGVVAXXXXXXXXXXXXXXXAYMLQNVGGPWAHAAGVKNVPADGGGXXXXXXXXXXXXXXXXXFFGRNGGPMCPEAVRVLLASPDRSKILISNLLAERTREVESAKRKRDQLLGERKRLARDRSKAAQRHHAIFERRSQPVLPVDDALLGKLKPLGGGKVNKPLGGAGGTAAAAAAVERPLVLKKLSIAAGVSGSILRAWDFLHLNSQMITLTPFGLDDFADSLHYTKGASVMVAEVHTRLLSVILRDGKFPKS 457
            DVVDLST+DN   +GSDGS +  A+   +K+G            DDA+A+KR+QRARA E XXXXXXX      A++      D  TDKLPPLRVAINSPGMGWLQPVR  S     A G XXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXAA SP+++ARI+RV +AADA+AA+V+SG +  XXXXXXXX      +     VGGPWAHAAGVKNV   GG                  FF ++  PMCPEAV+ LLA P++SK  +SNLL E  REVESAKRKRDQ+ GERKRLARDRSKA QRH+AI ERR QPVLPVDDALLG LKP   G +  P                PLVLKKLSIA  V+G ILRAWDFLHLNSQ I LTPFGLDDFADSLHY  GASVMVAEVHTRLLS+I R    P S
Sbjct:  262 DVVDLSTLDN-SSAGSDGSDADGASGTEKKKGGGGDTGKHKNGADDAEAKKREQRARANEXXXXXXXXVRAQALAKDTSTNNGDKTTDKLPPLRVAINSPGMGWLQPVRTSS-----AQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAACSPKSKARIERVASAADAIAARVSSGAMGGXXXXXXXXAN----SNATHGVGGPWAHAAGVKNVAGGGG--------------TAAGFFAKSITPMCPEAVKALLADPEKSKTFLSNLLGESVREVESAKRKRDQVNGERKRLARDRSKAHQRHNAILERRKQPVLPVDDALLGNLKPPEEGTLAAP----------------PLVLKKLSIATNVAGPILRAWDFLHLNSQTIMLTPFGLDDFADSLHYGAGASVMVAEVHTRLLSLIFRSKLGPPS 660
[Close]
BLAST of mRNA_L-elsbetiae_contig576.14170.1 vs. uniprot
Match: A0A6H5L6S8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6S8_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 2.330e-44
Identity = 167/276 (60.51%), Postives = 190/276 (68.84%), Query Frame = 0 
Query:   64 DDADARKRDQRARAAERXXXXXXXXXXXXEAQENKPTAADMATDKLPPLRVAINSPGMGWLQPVRKPS-QGVVGASGGXXXXXXXXXXXSPAATXXXXXXXXXXXXXXXXXXXXXXAASPEARARIDRVTTAADALAAKVTSGVVAXXXXXXXXXXXXXXXAYMLQNVGGPWAHAAGVKNVPADGGGXXXXXXXXXXXXXXXXXFFGRNGGPMCPEAVRVLLASPDRSKILISNLLAERTREVESAKRKRDQLLGERKRLARDRSKAAQRHHAIFE 338
            DDA+A+KR+QRARA   XXXXXX       A++      D  TDKLPPLRVAINSPGMGWLQPVR  S QG       XXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXA SP+++ARI+RV +AADA+AA+V+SG +  XXXXXXXX      +     VGGPWAHAAGVKNV   GG                  FF R+  PMCPEAV+ LLA P++SK+ +SNLL E  REVESAKRKRDQ+ GERKRLARDRSKA Q    + E
Sbjct:  125 DDAEAKKREQRARANXXXXXXXXEVRAQALAKDTATINGDETTDKLPPLRVAINSPGMGWLQPVRTSSAQGXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACSPKSKARIERVASAADAIAARVSSGAMGGXXXXXXXXAD----SNATHGVGGPWAHAAGVKNVAGGGG--------------TAAGFFSRSSTPMCPEAVKALLADPEKSKMFLSNLLGESVREVESAKRKRDQVKGERKRLARDRSKAQQARVRVKE 380
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig576.14170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZ90_ECTSI3.540e-9661.28Chain A, 4ank: A Designed Ankyrin Repeat Protein W... [more]
A0A6H5L6S8_9PHAE2.330e-4460.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 298..325
NoneNo IPR availableCOILSCoilCoilcoord: 74..98
IPR018501DDT domainSMARTSM00571testlast3coord: 393..454
e-value: 0.0071
score: 25.6
IPR018501DDT domainPFAMPF02791DDTcoord: 397..451
e-value: 5.3E-10
score: 39.5
IPR018501DDT domainPROSITEPS50827DDTcoord: 393..454
score: 10.78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig576contigL-elsbetiae_contig576:13378..22721 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig576.14170.1mRNA_L-elsbetiae_contig576.14170.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig576 13378..22721 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig576.14170.1 ID=prot_L-elsbetiae_contig576.14170.1|Name=mRNA_L-elsbetiae_contig576.14170.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=506bp
GNESWPLYTDSRPLRLMMSANDVVDLSTMDNGEKSGSDGSPSANVKPEKQ
GGGGGGGEEAAPNDDADARKRDQRARAAERKREKRAEAKQQKEAQENKPT
AADMATDKLPPLRVAINSPGMGWLQPVRKPSQGVVGASGGGGGGGGGGRM
QSPAATAKAAAMAATADASAVAAAASFAAASPEARARIDRVTTAADALAA
KVTSGVVAGAQAGGGGGAGGGAGAYMLQNVGGPWAHAAGVKNVPADGGGC
GGGGGGSSGTGAAAAAFFGRNGGPMCPEAVRVLLASPDRSKILISNLLAE
RTREVESAKRKRDQLLGERKRLARDRSKAAQRHHAIFERRSQPVLPVDDA
LLGKLKPLGGGKVNKPLGGAGGTAAAAAAVERPLVLKKLSIAAGVSGSIL
RAWDFLHLNSQMITLTPFGLDDFADSLHYTKGASVMVAEVHTRLLSVILR
DGKFPKSLSAALDPAAAAEVPAAVSSVFVGAAARAAAAAAAATAQGSSNA
SRLTVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018501DDT_dom