prot_L-elsbetiae_contig5750.14153.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5750.14153.1
Unique Nameprot_L-elsbetiae_contig5750.14153.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length273
Homology
BLAST of mRNA_L-elsbetiae_contig5750.14153.1 vs. uniprot
Match: D8LKN7_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKN7_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 9.850e-56
Identity = 94/127 (74.02%), Postives = 104/127 (81.89%), Query Frame = 0
Query:  138 AVEQHEQGGEEDGAPLCVVCANEIEFFAVGECNHPGRCSTCAMRSRVLLKDRSCPECKTVLDKLVVAELPASGTAPRFESFNLWGTVTGPGSKFEDASDMVFHACEAHHDSLLLARDLYCPVKGCTG 264
            AV+Q E+GG     PLC+VCANE+E+FAVGECNHPGRCSTCAMRSRVLLKDRSCPECKTV D+LVVAELPASG APRFE+FNLWG   GP S F+D S MVF+AC  H+D LL  RD YCPV GC G
Sbjct:  163 AVDQEEEGGR----PLCIVCANEMEYFAVGECNHPGRCSTCAMRSRVLLKDRSCPECKTVQDRLVVAELPASGDAPRFETFNLWGDFAGPDSVFDDESGMVFYACRGHYDDLLRMRDPYCPVAGCKG 285          
BLAST of mRNA_L-elsbetiae_contig5750.14153.1 vs. uniprot
Match: A0A6H5JGR2_9PHAE (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGR2_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 1.400e-55
Identity = 94/127 (74.02%), Postives = 104/127 (81.89%), Query Frame = 0
Query:  138 AVEQHEQGGEEDGAPLCVVCANEIEFFAVGECNHPGRCSTCAMRSRVLLKDRSCPECKTVLDKLVVAELPASGTAPRFESFNLWGTVTGPGSKFEDASDMVFHACEAHHDSLLLARDLYCPVKGCTG 264
            AV+Q E+GG     PLC+VCANE+E+FAVGECNHPGRCSTCAMRSRVLLKDRSCPECKTV D+LVVAELPAS  APRFE+FNLWG   GP S F+D S MVF+AC  H+D LL  RDLYCPV GC G
Sbjct:  160 AVDQEEEGGR----PLCIVCANEMEYFAVGECNHPGRCSTCAMRSRVLLKDRSCPECKTVQDRLVVAELPASRDAPRFETFNLWGDFAGPDSVFDDESGMVFYACRGHYDDLLRMRDLYCPVTGCKG 282          
BLAST of mRNA_L-elsbetiae_contig5750.14153.1 vs. uniprot
Match: A0A7S3Y343_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y343_HETAK)

HSP 1 Score: 120 bits (301), Expect = 4.330e-28
Identity = 58/114 (50.88%), Postives = 77/114 (67.54%), Query Frame = 0
Query:  147 EEDGAPLCVVCANEIEFFAVGECNHPGRCSTCAMRSRVLLKDRSCPECKTVLDKLVVAELPASGTAPR-FESFNLWGTVTGPGSKFEDASDMVFHACEAHHDSLLLARDLYCPV 259
            EE+  P C+VCA  +  +AVGECNH G CS C +R RV+LKDR CP C+T +DK+VVA+L   G APR FESF LWG V  P ++ ++ ++  F+AC AH ++ LL R   C V
Sbjct:    7 EEEEGPHCMVCAEPLVHYAVGECNHHGTCSLCILRLRVVLKDRRCPTCRTPMDKVVVAQLH-EGAAPRPFESFGLWGEVAPPEAQLDEEANAYFYACPAHFEACLLLRAHVCGV 119          
BLAST of mRNA_L-elsbetiae_contig5750.14153.1 vs. uniprot
Match: A0A662Y532_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y532_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.420e-26
Identity = 54/120 (45.00%), Postives = 80/120 (66.67%), Query Frame = 0
Query:  143 EQGGEEDGAPLCVVCANEIEFFAVGECNHPGRCSTCAMRSRVLLKDRSCPECKTVLDKLVVAELPASGTAPRFESFNLWGTVTGPGSKFEDASDMVFHACEAHHDSLLLARDLYCPVKGC 262
            E+ GE+D   +C++CA+ I+F+A+GECNH G CS C+MR R+++ DR+CP CK  LD++VV+  P +     FESF LWG   GP S  ++ S+M+F  C AH+ +L   R+  C +K C
Sbjct:  150 EEDGEKD---VCLLCADPIKFYAIGECNHHGICSKCSMRMRLIMDDRNCPMCKQPLDRVVVSNAPRA-----FESFELWGDAAGPESVLDEPSEMIFVNCRAHYHALRSLREFKCRMKRC 261          
BLAST of mRNA_L-elsbetiae_contig5750.14153.1 vs. uniprot
Match: A0A662XHC5_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XHC5_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.760e-26
Identity = 50/109 (45.87%), Postives = 73/109 (66.97%), Query Frame = 0
Query:  154 CVVCANEIEFFAVGECNHPGRCSTCAMRSRVLLKDRSCPECKTVLDKLVVAELPASGTAPRFESFNLWGTVTGPGSKFEDASDMVFHACEAHHDSLLLARDLYCPVKGC 262
            C++CA+ I+F+A+GECNH G CS C+MR R+++ DR+CP CK  LD++VV+  P +     FESF LWG   GP S  ++ S+M+F  C AH+ +L   R+  C +K C
Sbjct:  158 CLLCADPIKFYAIGECNHHGICSKCSMRMRLIMDDRNCPMCKQPLDRVVVSNAPRA-----FESFELWGDAAGPESVLDEPSEMIFVNCRAHYHALRSLREFKCRMKRC 261          
BLAST of mRNA_L-elsbetiae_contig5750.14153.1 vs. uniprot
Match: K3WZB0_GLOUD (RING-type E3 ubiquitin transferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZB0_GLOUD)

HSP 1 Score: 116 bits (291), Expect = 8.840e-26
Identity = 52/119 (43.70%), Postives = 78/119 (65.55%), Query Frame = 0
Query:  146 GEE--DGAPLCVVCANEIEFFAVGECNHPGRCSTCAMRSRVLLKDRSCPECKTVLDKLVVAELPASGTAPRFESFNLWGTVTGPGSKFEDASDMVFHACEAHHDSLLLARDLYCPVKGC 262
            GEE  D    C++CA+ I+F+AVGECNH G CS C MR R+++ D++CP CKTVLD+++V++   +     F+SF LWG   G  S  ++ S+M+F  C AH+D++   R+  C +K C
Sbjct:  140 GEEQSDEVEQCLLCADPIKFYAVGECNHTGICSKCFMRMRIIMNDKACPMCKTVLDRVIVSKEERT-----FDSFQLWGDALGADSFLDEPSEMIFFECRAHYDAMRALREFKCRIKKC 253          
BLAST of mRNA_L-elsbetiae_contig5750.14153.1 vs. uniprot
Match: A0A2D4C211_PYTIN (RING-type E3 ubiquitin transferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C211_PYTIN)

HSP 1 Score: 115 bits (289), Expect = 1.590e-25
Identity = 55/126 (43.65%), Postives = 81/126 (64.29%), Query Frame = 0
Query:  137 GAVEQHEQGGEEDGAPLCVVCANEIEFFAVGECNHPGRCSTCAMRSRVLLKDRSCPECKTVLDKLVVAELPASGTAPRFESFNLWGTVTGPGSKFEDASDMVFHACEAHHDSLLLARDLYCPVKGC 262
            G V+  E+G +E+    C++CA+ I ++AVGECNH G CS C++R R+L+ DR+CP CK  LD++VV          +F+SF LWG   G  S  +DASD++F+ C AH+++L   RD  C +K C
Sbjct:  137 GGVQDVEEGDDEE-EDSCLLCADPITYYAVGECNHHGICSKCSLRMRMLMNDRNCPICKQHLDRVVVCR-----GRRQFDSFQLWGDAGGRDSVRDDASDIIFYECRAHYNALRALRDFACRMKKC 256          
BLAST of mRNA_L-elsbetiae_contig5750.14153.1 vs. uniprot
Match: A0A5D6XSG8_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSG8_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.660e-25
Identity = 53/111 (47.75%), Postives = 75/111 (67.57%), Query Frame = 0
Query:  153 LCVVCANEIEFFAVGECNHPGRCSTCAMRSRVLLKDRSCPECKTVLDKLVVA-ELPASGTAPRFESFNLWGTVTGPGSKFEDASDMVFHACEAHHDSLLLARDLYCPVKGC 262
            LC++CA+ I+F+AVGECNH G CS C MR R++L D++CP CKT LD++VV+ EL A      F+SF  WG   GP +  ++ S+M+F  C AH+++L   R+  C VK C
Sbjct:  154 LCLLCADPIKFYAVGECNHTGMCSKCFMRMRLILHDKACPMCKTALDRVVVSRELRA------FDSFPFWGDALGPDAVLDEPSEMIFVDCRAHYEALRALREFKCRVKKC 258          
BLAST of mRNA_L-elsbetiae_contig5750.14153.1 vs. uniprot
Match: G4YVH3_PHYSP (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YVH3_PHYSP)

HSP 1 Score: 115 bits (288), Expect = 2.160e-25
Identity = 51/110 (46.36%), Postives = 70/110 (63.64%), Query Frame = 0
Query:  153 LCVVCANEIEFFAVGECNHPGRCSTCAMRSRVLLKDRSCPECKTVLDKLVVAELPASGTAPRFESFNLWGTVTGPGSKFEDASDMVFHACEAHHDSLLLARDLYCPVKGC 262
             C++CA+ I F+AVGECNH G CS C+MR R+++ DR+CP CK  L+++VV+  P       FESF LWG   GP S  ++ SDM+F  C AH+  L   R+  C +K C
Sbjct:  100 FCLLCADPIRFYAVGECNHHGICSRCSMRMRLIMDDRNCPMCKQPLERVVVSSAPRP-----FESFELWGDAAGPESVLDEPSDMIFVDCRAHYSELRSLREFKCRMKRC 204          
BLAST of mRNA_L-elsbetiae_contig5750.14153.1 vs. uniprot
Match: A0A024TX24_9STRA (RING-type E3 ubiquitin transferase n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TX24_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.240e-25
Identity = 51/118 (43.22%), Postives = 75/118 (63.56%), Query Frame = 0
Query:  140 EQHEQGGEEDGAPLCVVCANEIEFFAVGECNHPGRCSTCAMRSRVLLKDRSCPECKTVLDKLVVAELPASGTAPRFESFNLWGTVTGPGSKFEDASDMVFHACEAHHDSLLLARDLYC 257
            +  E+   ++   LC+VCAN   + A+GECNH G CSTC+MR R+L+KD +CP CK    +++V ++ A      + SF +WG   GPG   +D S+M F  C+AH++SL+  RDLYC
Sbjct:  174 DDDERSESKEARELCLVCANPFRYHAIGECNHEGICSTCSMRMRLLMKDFNCPICKQANPRVIVTDVIAP-----YASFGIWGDTGGPGVLLDDRSEMFFSRCDAHYESLVRRRDLYC 286          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5750.14153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKN7_ECTSI9.850e-5674.02RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A6H5JGR2_9PHAE1.400e-5574.02RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A7S3Y343_HETAK4.330e-2850.88Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A662Y532_9STRA1.420e-2645.00RING-type E3 ubiquitin transferase n=1 Tax=Nothoph... [more]
A0A662XHC5_9STRA1.760e-2645.87RING-type E3 ubiquitin transferase n=1 Tax=Nothoph... [more]
K3WZB0_GLOUD8.840e-2643.70RING-type E3 ubiquitin transferase n=1 Tax=Globisp... [more]
A0A2D4C211_PYTIN1.590e-2543.65RING-type E3 ubiquitin transferase n=1 Tax=Pythium... [more]
A0A5D6XSG8_9STRA1.660e-2547.75RING-type E3 ubiquitin transferase n=1 Tax=Pythium... [more]
G4YVH3_PHYSP2.160e-2546.36RING-type E3 ubiquitin transferase n=1 Tax=Phytoph... [more]
A0A024TX24_9STRA2.240e-2543.22RING-type E3 ubiquitin transferase n=3 Tax=Aphanom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 137..209
e-value: 2.1E-5
score: 25.7
NoneNo IPR availablePANTHERPTHR22938ZINC FINGER PROTEIN 598coord: 153..265
NoneNo IPR availablePANTHERPTHR22938:SF0E3 UBIQUITIN-PROTEIN LIGASE ZNF598coord: 153..265
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 150..200
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 154..195
score: 9.273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5750contigL-elsbetiae_contig5750:6639..10136 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5750.14153.1mRNA_L-elsbetiae_contig5750.14153.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5750 6497..10136 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5750.14153.1 ID=prot_L-elsbetiae_contig5750.14153.1|Name=mRNA_L-elsbetiae_contig5750.14153.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=273bp
MNSSEAPASGRGGAGPGLSASAPAFTPGEATSARSGSSARRRRGQPGSNV
EDGGNSRNGGRGGRGGRRGGGTSPSPAPAASTATSGGHAQTAPQEGANSR
KRGARGGRGRGRGRSGGRGGAPPRGSRHAAQGGRRRGAVEQHEQGGEEDG
APLCVVCANEIEFFAVGECNHPGRCSTCAMRSRVLLKDRSCPECKTVLDK
LVVAELPASGTAPRFESFNLWGTVTGPGSKFEDASDMVFHACEAHHDSLL
LARDLYCPVKGCTGPPCTSAAAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING