prot_L-elsbetiae_contig575.14148.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig575.14148.1
Unique Nameprot_L-elsbetiae_contig575.14148.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1072
Homology
BLAST of mRNA_L-elsbetiae_contig575.14148.1 vs. uniprot
Match: A0A6H5JT44_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JT44_9PHAE)

HSP 1 Score: 1113 bits (2879), Expect = 0.000e+0
Identity = 747/1007 (74.18%), Postives = 815/1007 (80.93%), Query Frame = 0
Query:   60 RRRTRSDEMEKVTAQRMQTLKRLLPGLEAGQLVSRAPALLGSTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLYHEDTLAPRIEFIKRLFPETPKLLSRAPVLLTHDPETFLLPKIKQLESLLPGVDVLKVVRTEPTILYLDIGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSKIETTVAAKFQQLQELFPDANVVSMVESDATVLLYDYTSVSIKVDCWRERVSNVTELNQLIQDYPLLLSYSLDTSVSRLDFLIESNGAKFSAPHLRKMVRMAKRDWMALHGDKYRRFLERKVEGPSSMRLWPGLYFDSDTKDTKGGAGGKKLLQGEGMSAKFQDDGSVEVSSAAELKATNAYIKSLEKQYGKTIKETQLRFSPALRRGKYGDNPSEVDMILYDIKSFDQQVRKFATGYRVKRFKELLPGLETKTLFTDYPKVLMMDLKKASHLAPCSVSYCTQVEEKVEELRELLPGECVARVVSSAPDLLLNDVQTCLRPRMTRLVAALTTVKQFEGIIDADKVRAXXXXXXXXXXXXXXNVVVPSLQYMLQSTSDHDELGKRLFRDPSLLVVGVGPLARLQYTLEQHRNGTASIATGYLGAAV--VSTSTAAYFDNPWVGAGSSGSPKAEAGAEDMPGRKTRKRKGGKNTSMSLSAVDLSLSLEEDQTRLLPPVIVPQQVLKCQLRDFVARNPEYISFLAQRQGLDASSIFHNANTNVEGDGQLEENGYQSQVVFWERAVGGRLSEMFRPVDSPYAREKMREAAGNG-----QKGPSLSELDMLIGDVLYFNHRMGVLASKIQKKMPPAVDIGEEASKLAEDVQWGSRQIRRLLGLGSWTEQVEVADTDASCESKSGSAAGGDAPQHQDKEDVCEPRLALPQQKQRGKKRQWVSDTFQSMLGSVGGG--GDNDSVEAVGTVEAAVKAKQGGDRETAQELERLLGEVSSYEGRLDNLLDLSSPIRISDDDS 1057
            +RRTRSD+M++VTAQRMQTLKRLLPGLEAGQLVSRAPALLGSTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LLYHEDTLAPRIEF+KRLFPE+P+LLSRAP+LLTHDPETFL+PKI QLESLLPG+DVLKVVRTEPTILYLDIGGL    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     TTVAAKFQQLQ+LFPDANVVSMVESDATVLLYDYTSV +KVDCWRERVSN TELNQLIQDYPLLLSYSLDTSVSRLDFLIE+ G K     +R  VRMAKRDW+A+HG KYR+FLERKVEGPS +RLWPGLYFDSDT    G  G  +LL+GEGMSAK QDDGSVEVSSAAE+K  +AYIK+LE++YGK IKETQLRF+PA+RRGK GDNPSEVDMILYDIKSFDQQVRK ATGYR+KRFKELLPGL+T+TLFT+YP VL+MDLKK              VE+KVEELRELLPGE VA VVS APDLLLNDVQTCLRPRMTRLVAALTTVKQF+G         XXXXXXXXXXXXXX   VPSLQYMLQSTSDHDEL  RLFRDPSLLVVGVGPLARLQYTLEQHRNG+ASIA G LGA V   +  TA++   PWVGAGS    KA  G     G  + +R   K+ + S       + L EDQ+RLLPPVIVPQ +LKCQ+RDF+ RNPEY+SFLAQRQGLD SS+ H    + EGD Q         V FWERAVG RLSEMFRPVDSPYARE MREA  NG     QK P LSELDMLIGDVL+FN RM VLASKIQKKMP  VD+GEEA KLAEDV+WGSRQI+RLLGLGSWTEQ           ++  S    DA ++     VC P    PQ K+RGKKR+WVSDTFQS++GSVGG   G  D+++    VE +VK   GG+RETAQELERLLGEVSS EGRLDNLLDLSS I  + DDS
Sbjct:   52 KRRTRSDDMDEVTAQRMQTLKRLLPGLEAGQLVSRAPALLGSTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYHEDTLAPRIEFMKRLFPESPRLLSRAPLLLTHDPETFLMPKIHQLESLLPGIDVLKVVRTEPTILYLDIGGLVKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVAAKFQQLQDLFPDANVVSMVESDATVLLYDYTSVGVKVDCWRERVSNATELNQLIQDYPLLLSYSLDTSVSRLDFLIETTGVKPRPATMRTTVRMAKRDWLAVHGVKYRKFLERKVEGPSVLRLWPGLYFDSDTGSGNGSGG--RLLKGEGMSAKLQDDGSVEVSSAAEMKEASAYIKALERKYGKIIKETQLRFTPAVRRGKLGDNPSEVDMILYDIKSFDQQVRKLATGYRLKRFKELLPGLDTETLFTEYPNVLLMDLKK--------------VEDKVEELRELLPGERVAGVVSVAPDLLLNDVQTCLRPRMTRLVAALTTVKQFQGXXXXXXXXXXXXXXXXXXXXXXXXXXVPSLQYMLQSTSDHDELATRLFRDPSLLVVGVGPLARLQYTLEQHRNGSASIALGNLGAYVGPEAALTASHHPTPWVGAGSG---KAATG-----GTFSLRRPSTKDDASS------DVHLGEDQSRLLPPVIVPQ-ILKCQMRDFITRNPEYVSFLAQRQGLDVSSMSH----SPEGDDQ--------SVAFWERAVGRRLSEMFRPVDSPYARE-MREARANGKGPDGQKAPPLSELDMLIGDVLHFNDRMTVLASKIQKKMPQTVDVGEEAKKLAEDVKWGSRQIKRLLGLGSWTEQNVATPHSEVQVAEIPSQNANDASKN-----VCNPMSTFPQGKRRGKKRRWVSDTFQSLMGSVGGSAAGGADAIKVATAVEVSVK--DGGNRETAQELERLLGEVSSNEGRLDNLLDLSSSIPDNTDDS 1007          
BLAST of mRNA_L-elsbetiae_contig575.14148.1 vs. uniprot
Match: A0A0G4GCF2_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GCF2_VITBC)

HSP 1 Score: 76.3 bits (186), Expect = 2.760e-10
Identity = 98/421 (23.28%), Postives = 167/421 (39.67%), Query Frame = 0
Query:  273 VSKIETTVAAKFQQLQELFPDANVVSMVESDATVLLYDYT-SVSIKVDCWRERVSNVTELNQLIQDYPLLLSYSLDTSVSRLDFLIESNGAKFSAPHLRKM--------VRMAKRDWMALHGDKYRRFLERKVEGPSSMRLWPGLYFDSDTKDTKGGAGGKKLLQGEGMSAKFQDDGSVEVSSAAELKATNAYIKSLEKQYGKTIKETQLRFSPALRRGKYGDNPSEVDMILYDIKSFDQQVRKFATG--YRVKRFKELLPGLETKTLFTDYPKVLMMDLKKASHLAPCSVSYCTQVEEKVEELRELLPGECVARVVSSAPDLLLNDVQTCLRPRMTRLVAALTTVKQFE----GIIDADKVRAXXXXXXXXXXXXXXNVVVPSLQYMLQSTSDHDELGKRLFRDPSLLVVGVGPLARLQY 678
            VS ++ T+A K +Q+  +FP A+V ++V  +  +L  D   +++ KVD WR  V++   L+  + + P +L+Y +  SV+RLD L      K   P  RK+        ++M+  D  A    +Y  FL+R++ G S  R   G                                 SV VS           ++ LE  Y KT  +   R     R    G   SE+D+ ++D+ S ++++R    G   R  + ++LLPG++   +  + PK+L+ D                 +  ++E+                        V+  +R R+  LV  LT +   E    G + +  + A                +V   + +     D + L  RL RDP LL V +  LAR+ Y
Sbjct:  497 VSDVDGTIAEKLEQIPRVFPSADVSALVVKEPRLLEMDIKGTLAAKVDGWRRNVNDPAALDARLLEQPSILTYGV-ASVARLDHL-----NKQRPPRTRKLDVGETFSAIKMSC-DKFAQRHPQYASFLQRQLAGVSMPRHKAGS--------------------------------SVSVS-----------VRELESVYAKTHID---RNRVMKRMDGQGMKASEIDIFMHDLLSAEKRIRTLLVGGDLRAIKLRDLLPGIDAAKVMAENPKLLLED--------------ADTLTRRMEQXXXXXXXXXXXXXXXXXXXXXHASVERDVRRRLEGLVEELTRLNGGERPPKGQVSSMVLHAPQVLLTDG--------MVERCRLLESMVEDPESLCARLLRDPRLLSVPMTSLARVAY 842          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig575.14148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JT44_9PHAE0.000e+074.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0G4GCF2_VITBC2.760e-1023.28Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1026..1046
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 29..352
coord: 224..602
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..1071
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.698
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 620..652
e-value: 220.0
score: 9.1
coord: 262..292
e-value: 1600.0
score: 2.2
coord: 157..188
e-value: 790.0
score: 4.7
coord: 125..154
e-value: 190.0
score: 9.5
coord: 332..363
e-value: 49.0
score: 12.8
coord: 227..258
e-value: 590.0
score: 5.7
coord: 89..120
e-value: 2500.0
score: 0.7
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 90..378
e-value: 1.9E-12
score: 46.8
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 154..393
e-value: 2.6E-18
score: 68.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig575contigL-elsbetiae_contig575:8973..22431 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig575.14148.1mRNA_L-elsbetiae_contig575.14148.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig575 8842..23143 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig575.14148.1 ID=prot_L-elsbetiae_contig575.14148.1|Name=mRNA_L-elsbetiae_contig575.14148.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1072bp
MHRSKGASLLGAALCVLSLRLGSCFTTSSAGASRQTATALRSASVANKDK
VACIGDVDVRRRTRSDEMEKVTAQRMQTLKRLLPGLEAGQLVSRAPALLG
STQLEEIVPRRMAAISNLLPGVDVHRLVRHNPGLLLYHEDTLAPRIEFIK
RLFPETPKLLSRAPVLLTHDPETFLLPKIKQLESLLPGVDVLKVVRTEPT
ILYLDIGGLIKRRLESLSELLPGHDVVLLVKKVPRLLTTNVSSLAQKLSG
LRWLLGPEADLHRIIHRRPALLVSKIETTVAAKFQQLQELFPDANVVSMV
ESDATVLLYDYTSVSIKVDCWRERVSNVTELNQLIQDYPLLLSYSLDTSV
SRLDFLIESNGAKFSAPHLRKMVRMAKRDWMALHGDKYRRFLERKVEGPS
SMRLWPGLYFDSDTKDTKGGAGGKKLLQGEGMSAKFQDDGSVEVSSAAEL
KATNAYIKSLEKQYGKTIKETQLRFSPALRRGKYGDNPSEVDMILYDIKS
FDQQVRKFATGYRVKRFKELLPGLETKTLFTDYPKVLMMDLKKASHLAPC
SVSYCTQVEEKVEELRELLPGECVARVVSSAPDLLLNDVQTCLRPRMTRL
VAALTTVKQFEGIIDADKVRAMVVTCPQLLLSDVRNVVVPSLQYMLQSTS
DHDELGKRLFRDPSLLVVGVGPLARLQYTLEQHRNGTASIATGYLGAAVV
STSTAAYFDNPWVGAGSSGSPKAEAGAEDMPGRKTRKRKGGKNTSMSLSA
VDLSLSLEEDQTRLLPPVIVPQQVLKCQLRDFVARNPEYISFLAQRQGLD
ASSIFHNANTNVEGDGQLEENGYQSQVVFWERAVGGRLSEMFRPVDSPYA
REKMREAAGNGQKGPSLSELDMLIGDVLYFNHRMGVLASKIQKKMPPAVD
IGEEASKLAEDVQWGSRQIRRLLGLGSWTEQVEVADTDASCESKSGSAAG
GDAPQHQDKEDVCEPRLALPQQKQRGKKRQWVSDTFQSMLGSVGGGGDND
SVEAVGTVEAAVKAKQGGDRETAQELERLLGEVSSYEGRLDNLLDLSSPI
RISDDDSIPTDAGVDENDNSR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf