prot_L-elsbetiae_contig5710.14099.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5710.14099.1
Unique Nameprot_L-elsbetiae_contig5710.14099.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length108
Homology
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BLAST of mRNA_L-elsbetiae_contig5710.14099.1 vs. uniprot
Match: D8LE68_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE68_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 6.290e-46
Identity = 85/116 (73.28%), Postives = 93/116 (80.17%), Query Frame = 0 
Query:    1 MLSLRPVGTLEG--EGFRPPLPLPHPNEASVVLVGGERASEHDSFNGACNARIVTPPPGGDVTGSGSAT------AVAAAADGGRLLATMVVGEDGKALLAQFYQKHGCIAISDVS 108
            MLS RPVGTL     GF+ PLPL HP EASVVLVGG RASEHDSFNGAC+A+IVTP PGG+++GS +        A  AAADGGRLLATMVVGE GKALLAQFYQKHGCIAISDV+
Sbjct:    1 MLSFRPVGTLPAGSSGFQSPLPLAHPTEASVVLVGGSRASEHDSFNGACSAKIVTPTPGGEMSGSNNQANQSWGGAAGAAADGGRLLATMVVGEGGKALLAQFYQKHGCIAISDVT 116
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5710.14099.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LE68_ECTSI6.290e-4673.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5710contigL-elsbetiae_contig5710:8045..9848 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5710.14099.1mRNA_L-elsbetiae_contig5710.14099.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5710 8045..9860 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5710.14099.1 ID=prot_L-elsbetiae_contig5710.14099.1|Name=mRNA_L-elsbetiae_contig5710.14099.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=108bp
MLSLRPVGTLEGEGFRPPLPLPHPNEASVVLVGGERASEHDSFNGACNAR
IVTPPPGGDVTGSGSATAVAAAADGGRLLATMVVGEDGKALLAQFYQKHG
CIAISDVS
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