prot_L-elsbetiae_contig570.14085.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig570.14085.1
Unique Nameprot_L-elsbetiae_contig570.14085.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length381
Homology
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BLAST of mRNA_L-elsbetiae_contig570.14085.1 vs. uniprot
Match: A0A6H5K5X6_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X6_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 8.020e-85
Identity = 174/433 (40.18%), Postives = 200/433 (46.19%), Query Frame = 0 
Query:    1 MESAERLYDKLIES--DRDGSGGISIEEYVAFSEQEGVPRNVAETMFFQADVHGRGQISFEEWTAMMVGRVGRAEGSFNCGGHHGLTQYVAVCNGLACDFCHAPISAGDLAKGCRRCDCDACASCSGLXXXXXXXXXXXXXXXX--------------------------------------------------------------GVAPTA---------------------------------------------------------------------------SAASLWQSHRGAAAVLDVERPGAFDCRWQHGLVPFTVTVGPSVACDWCGHSVPPGQLCFSCRVCDADGCADCAAASL------GAPDGNASGLTCPGRHGLAQARAAGGCVCDFCRAPVAVGAKVYSCRMCGVDACVGCVWKDHRR 288
            M+SAE LY    ++  D DGSGGIS+EEYV F  +EG+PR+VAET FFQAD+ G GQISFEEWTAMM+GRVGR E SFNCGGHHGL QYVAV NG+ACDFC API AG  AKGCRRCDCDACA+CSGL                                                                               VA  A                                                                           +AA L ++     A      P +FDCR +HGL  +TV  G  VACDWCG S+P G     CR CD DGC DCAA SL      G+  G+A GLTCPG HGL  A A  GCVCD C   V  G+KV+SCR+C +DACV C+W+DHRR
Sbjct:  136 MDSAEHLYTMFTQACCDSDGSGGISVEEYVYFCGREGIPRSVAETTFFQADIDGNGQISFEEWTAMMIGRVGRDEDSFNCGGHHGLVQYVAVFNGMACDFCGAPIQAGFFAKGCRRCDCDACATCSGLPTTPAPPPQLPPRDGLESGSASAPGQTKKKAKKKGKGGTKETVGTKKVKKVVATGEGKTKVKKQVAASGXXXXAKVNKXVAAPAXEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGTKVKKKATPAPRPPTEAPPPQQQPFQSRPPARVHVAAAPLPRASAWEVATTVQTWPDSFDCRLRHGLTLYTVPFGLPVACDWCGASLPLGYPAVGCRACDVDGCLDCAARSLMPSAGDGSVSGSALGLTCPGLHGLTMAAAGPGCVCDLCGCGVGAGSKVFSCRLCDMDACVSCIWRDHRR 568
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BLAST of mRNA_L-elsbetiae_contig570.14085.1 vs. uniprot
Match: D7G0S5_ECTSI (Calcium dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S5_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 2.360e-41
Identity = 82/126 (65.08%), Postives = 90/126 (71.43%), Query Frame = 0 
Query:    1 MESAERLYDKLIESDRDGSGGISIEEYVAFSEQEGVPRNVAETMFFQADVHGRGQISFEEWTAMMVGRVGRAEGSFNCGGHHGLTQYVAVCNGLACDFCHAPISAGDLAKGCRRCDCDACASCSGL 126
            M+SAE LY    E D DGSGGISIEEYV F  +EGVPR+VAET                 WTAMM+GRVGR + SFNCGG+HGL QYVAV NG+ACDFC  PI AG  AKGCRRCDCDACA+CSGL
Sbjct:  131 MDSAEHLYTMFTECDSDGSGGISIEEYVYFCSREGVPRSVAETTXXXXXXXXXXXXXXXXWTAMMMGRVGRDKDSFNCGGNHGLVQYVAVYNGMACDFCGTPIQAGFFAKGCRRCDCDACATCSGL 256
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig570.14085.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K5X6_9PHAE8.020e-8540.18EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7G0S5_ECTSI2.360e-4165.08Calcium dependent protein kinase n=1 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 2..66
e-value: 1.1E-9
score: 40.7
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 2..30
score: 5.392
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 36..71
score: 8.934
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 14..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig570contigL-elsbetiae_contig570:23164..27947 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig570.14085.1mRNA_L-elsbetiae_contig570.14085.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig570 19963..27947 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig570.14085.1 ID=prot_L-elsbetiae_contig570.14085.1|Name=mRNA_L-elsbetiae_contig570.14085.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=381bp
MESAERLYDKLIESDRDGSGGISIEEYVAFSEQEGVPRNVAETMFFQADV
HGRGQISFEEWTAMMVGRVGRAEGSFNCGGHHGLTQYVAVCNGLACDFCH
APISAGDLAKGCRRCDCDACASCSGLSSAQPPPPPPPPPPQPGVAPTASA
ASLWQSHRGAAAVLDVERPGAFDCRWQHGLVPFTVTVGPSVACDWCGHSV
PPGQLCFSCRVCDADGCADCAAASLGAPDGNASGLTCPGRHGLAQARAAG
GCVCDFCRAPVAVGAKVYSCRMCGVDACVGCVWKDHRRALSAGGEFVCER
FRTHAARPLDITTTQQQLCRRCNWCLGVPCLGHCMLRCDLCDCDACALCV
ATVPAQEARVRRVRAAAAAAATAAAHAAWLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair