prot_L-elsbetiae_contig570.14084.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig570.14084.1
Unique Nameprot_L-elsbetiae_contig570.14084.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length354
Homology
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BLAST of mRNA_L-elsbetiae_contig570.14084.1 vs. uniprot
Match: A0A6H5K5X6_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X6_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.070e-11
Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 0 
Query:  294 PFEFDSVVRVLGVEDPEVQGKLLTVIGFEAAADGGPGTVVLQRRGRVVKAPASKVYRL 351
            PF FDSVVRVLGV+DP   GKL+TV+GFE    GG G VVLQR+ +VV+ PA  V+ +
Sbjct:  690 PFAFDSVVRVLGVDDPRTDGKLMTVVGFEPCPKGGEGIVVLQRKRKVVRVPAENVFNV 747
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BLAST of mRNA_L-elsbetiae_contig570.14084.1 vs. uniprot
Match: D7G0S5_ECTSI (Calcium dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S5_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 2.540e-11
Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 0 
Query:  294 PFEFDSVVRVLGVEDPEVQGKLLTVIGFEAAADGGPGTVVLQRRGRVVKAPASKVYRL 351
            PF FDSVVRVLGV+DP   GKL+TVIGFE    GG G VVLQR+ +VV+ P + V+ +
Sbjct:  685 PFAFDSVVRVLGVDDPRTDGKLMTVIGFEPCPRGGAGIVVLQRKRKVVRVPTANVFNV 742
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig570.14084.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K5X6_9PHAE1.070e-1160.34EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7G0S5_ECTSI2.540e-1160.34Calcium dependent protein kinase n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig570contigL-elsbetiae_contig570:8361..9796 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig570.14084.1mRNA_L-elsbetiae_contig570.14084.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig570 7773..10023 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig570.14084.1 ID=prot_L-elsbetiae_contig570.14084.1|Name=mRNA_L-elsbetiae_contig570.14084.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=354bp
MCGVDACVACVWKDHRRALSTGGVFACERFKTHASQPLDITTPQQLCHRC
NWCLGAPSLGHRLMRCDRCDCDVCALCVATVPAQEVKVQRAKAAARSAQL
AAKKTDTEQAERLLHDMSIGGATPGGPGPPHPPPAGGLPSPPQPPLTSAL
PPPPCYGAVAAAPSHGGPPAATAAQPTPPSYGAMAGPSSSSAPVSSTNGH
VTQAPALPSYNAMAGSSPAAAAPSYQDMAAAVSALPGGKQQQPPSYSSFA
QTGGGAEAAGEGRGPNRLPPPASCSPERETPAPTASAANGAGSPFEFDSV
VRVLGVEDPEVQGKLLTVIGFEAAADGGPGTVVLQRRGRVVKAPASKVYR
LTD*
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