prot_L-elsbetiae_contig57.14080.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig57.14080.1
Unique Nameprot_L-elsbetiae_contig57.14080.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length663
Homology
BLAST of mRNA_L-elsbetiae_contig57.14080.1 vs. uniprot
Match: D8LEZ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ9_ECTSI)

HSP 1 Score: 766 bits (1978), Expect = 5.520e-271
Identity = 429/488 (87.91%), Postives = 447/488 (91.60%), Query Frame = 0
Query:  177 RFENPRNEALNDRERIERRRKKRALRPSNFDVKPDDPTAVALLEASAQQMLVSRGSGVMQPAAPQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMTGFFNDVINRALEYPVDGGPVASVYVSQEKAFAFLELKTMELATAVLELDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISSTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAMACEGLHGMQLGDKTLTVRPATDRGSTSGQHQQXXXXXXXXXXXXXXXXXXYXHQQLQPLQMSGAA-MGLV-PPTQQEQMQLAQAMAALDPNAAQAAMANLVQAGAGGXXXXXXXXAPSAAAESAVAANLIRAIPPTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASRAVGKVFVEYDSRESAQKAALSLAGRQFGANIVKVEYVNEEKFARREFD 662
            RFENPRNEALNDR+RIERRRK+RALRPSNFDVKPDDPTAVALLEASAQQMLVSRGSGVMQ AAPQLMARLPGASNQQTRHARRLYIGGCPKTTEEEM+ FFN+VINRALEYP+DGG VASVYVSQEKAFAFLELKTMELAT+VLELDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISSTVPDSDNKVFIGGLPYNL+EDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTA+ACEGLHGM LGDKTLTVRPATDRGS+      XXXXXXXXXXXXXX            +QM G   MGL  PPTQQEQMQLAQAMAALDPNA+QAAMA+L Q GAG          PSAAAESAVAANLIRAIPPTRVLVMLNMVTEAEL DPQEYEDIVDDIQQECSSHGTVLS+IVPRPGEADASRAVGKVFVEYD+++SAQKAALSLAGRQFGANIVKVEY+NEEKFARREF+
Sbjct:  166 RFENPRNEALNDRDRIERRRKRRALRPSNFDVKPDDPTAVALLEASAQQMLVSRGSGVMQSAAPQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMSSFFNEVINRALEYPIDGGAVASVYVSQEKAFAFLELKTMELATSVLELDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISSTVPDSDNKVFIGGLPYNLTEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGXXXXXXXXXXXXXXXXXXXMPG---------MQMGGGQQMGLTAPPTQQEQMQLAQAMAALDPNASQAAMASLAQGGAGAV--------PSAAAESAVAANLIRAIPPTRVLVMLNMVTEAELRDPQEYEDIVDDIQQECSSHGTVLSIIVPRPGEADASRAVGKVFVEYDTKDSAQKAALSLAGRQFGANIVKVEYLNEEKFARREFE 636          
BLAST of mRNA_L-elsbetiae_contig57.14080.1 vs. uniprot
Match: A0A8K1C271_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C271_PYTOL)

HSP 1 Score: 334 bits (856), Expect = 4.500e-103
Identity = 206/463 (44.49%), Postives = 276/463 (59.61%), Query Frame = 0
Query:  204 SNFDVKPDDPTAVALLEASAQQML---VSRGSGVMQPAA--PQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMTGFFNDVINRALEYPVDGGPVASVYVSQEKAFAFLELKTMELATAVLELDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISSTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAMACEGLHGMQLGDKTLTVRPATDRGSTSGQHQQXXXXXXXXXXXXXXXXXXYXHQQLQPLQMSGAAMGLVPPTQQEQMQLAQAMAALDPNAAQAAMANLVQAGAGGXXXXXXXXAPSAAAESAVAANLIRAIPPTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASRAVGKVFVEYDSRESAQKAALSLAGRQFGANIVKVEYVNEEKFARREF 661
            SNFDV+P   T       +AQ +L   ++  SG + PA+  P        AS+QQTRHARR+Y+GG  +  E+E+T FFNDVI+RAL    +GG V SVY+++E+ FAF+ELKT+EL TA + LDG+ ++   LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S+TV DS +K+F+GG+PY+L++DQV+ELL AFGPLKSFHLV++  +  SKGYGFCEYL+  VT  AC GL+ M+LGDKTLTVR A  + +                                    SG +MGL P T                    AA+  +  AG G          PSA   +           P+RV+V+LNMVT  EL D +EY DI+DDI+ EC   G VLS+++PRP +   + AVGKVFVE+    SAQ A+  L GR F    V VE+++E+K+ARR+F
Sbjct:  159 SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGAVGPASFGPPPANGTYSASHQQTRHARRIYVGGIGEVAEQEITEFFNDVIDRALGERQEGGAVVSVYINRERHFAFVELKTIELTTACMNLDGVSFRGQPLKIRRPNDYNPSNVPKDLGPIPQLNLAALGIVSTTVQDSPHKIFVGGIPYHLNDDQVKELLQAFGPLKSFHLVKELNTNMSKGYGFCEYLDPNVTDAACIGLNDMKLGDKTLTVRRAMSQENAKAVASAAGSVN------------------------SGLSMGLDPTT--------------------AALQTISMAGFG-------LGIPSAPLGN-----------PSRVIVLLNMVTADELEDDEEYNDILDDIKTECERFGPVLSLVIPRPRDGYHT-AVGKVFVEFADIASAQGASQELHGRGFANRTVSVEFMDEQKYARRDF 558          
BLAST of mRNA_L-elsbetiae_contig57.14080.1 vs. uniprot
Match: A0A484DRL9_BRELC (Splicing factor U2AF subunit n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRL9_BRELC)

HSP 1 Score: 333 bits (853), Expect = 1.090e-102
Identity = 217/494 (43.93%), Postives = 275/494 (55.67%), Query Frame = 0
Query:  191 RIERRRKKRALRPSNFDVKP----DDPTAVALLEASAQQMLVSRGSGVMQPAA-------PQLMARLPGASN-------------QQTRHARRLYIGGCPKTTEEEMTGFFNDVINRALEYPVDGGPVASVYVSQEKAFAFLELKTMELATAVLELDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISSTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAMACEGLHGMQLGDKTLTVRPATDRGSTSGQHQQXXXXXXXXXXXXXXXXXXYXHQQLQPLQMSGAAMGLVPPTQQEQMQLAQAMAALDPNAAQAAMANLVQAGAGGXXXXXXXXAPSAAAESAVAANLIRAIPPTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASRAVGKVFVEYDSRESAQKAALSLAGRQFGANIVKVEYVNEEKFARRE 660
            RI RRRKK     SNFDV+P    D+  A    +A  QQ + +  SG + PA+       P   +  PG S+             QQTRHARRLY+GG  +  E E+T FFNDVI+RALE    GG V SVY+++E+ FAF+EL+T+EL TA + LDG+ Y    LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S+TV D   K+F+GGLPY+L+E+QV+ELL AFGPL+SFHLV++  S  SKGYGFCEYL+  VT  AC GL+ M+LGDKTLTVR A  + +                                    +G  MGL P                    +QAAM  +  AG  G                           PTRV+V+LNMVT  EL D  EY DIVDDI+ EC   G V+S+++PRP +   S AVGKVF+E+    SAQ AA  L GR F   IV VE++ EE +ARRE
Sbjct:  132 RIIRRRKK-----SNFDVRPPGVTDENAAAYAAQAILQQNMAAL-SGAVGPASFGPPQISPSSTSTTPGYSHASXXXXXXFAGMSQQTRHARRLYVGGIGEIAEPEITAFFNDVIDRALEEKQPGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYHGQPLKIRRPNDYNPVTVPTELGPIPQLNLAALGIVSTTVSDGPGKIFVGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYLDVSVTDAACMGLNDMRLGDKTLTVRRAMSQENAKAVANAAGNVN------------------------TGLEMGLDP--------------------SQAAMQAMTLAGITGVPLGV----------------------PTRVIVLLNMVTRDELEDDDEYADIVDDIKGECERFGRVVSLLLPRPRDGILS-AVGKVFIEFQDVASAQGAATELHGRGFSNRIVSVEFMPEELYARRE 552          
BLAST of mRNA_L-elsbetiae_contig57.14080.1 vs. uniprot
Match: A0A5D6XX73_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XX73_9STRA)

HSP 1 Score: 331 bits (848), Expect = 3.320e-101
Identity = 218/496 (43.95%), Postives = 284/496 (57.26%), Query Frame = 0
Query:  192 IERRRKKRALRPSNFDVKP----DDPTAVALLEASAQQMLVSRGSGV------------MQPAAPQ------LMARLP----GASNQQTRHARRLYIGGCPKTTEEEMTGFFNDVINRALEYPVDGGPVASVYVSQEKAFAFLELKTMELATAVLELDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISSTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAMACEGLHGMQLGDKTLTVRPATDRGSTSGQHQQXXXXXXXXXXXXXXXXXXYXHQQLQPLQMSGAAMGLVPPTQQEQMQLAQAMAALDPNAAQAAMANLVQAGAGGXXXXXXXXAPSAAAESAVAANLIRAIPPTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASRAVGKVFVEYDSRESAQKAALSLAGRQFGANIVKVEYVNEEKFARREF 661
            I RRRKK     S FDV+P    ++  A    +A  QQ + +   G             + P+AP       +   LP    G ++QQTRHARRLY+GG  +  E+E+T FFNDVI+RAL   ++GG V SVY+++E+ FAF+EL+++EL TA + LDG+ ++   LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S+TV D   K+FIGGLPY+L+E+Q++ELL AFGPL+SFHLV++  S  SKGYGFCEYL+   T  AC GL+ M+LGDKTLTVR A     TS                                    A  G         M+LA          +QAA+  L  AG G         APS  + +           P+RV+V+LNMVT  EL D  EY DIVDDI+ EC   G V+S+++PRP +   S AVGKVFVEYD+  SAQ AA  L GR F   IV VEY++E K+ARREF
Sbjct:  190 IVRRRKK-----SYFDVRPPGVTEENAAAYAAQAILQQNMATHAGGAGAVAFNPPAAVAVAPSAPAHSHSALVPGLLPPQSFGGNSQQTRHARRLYVGGLGEVGEQEITEFFNDVIDRALGERMEGGAVVSVYINRERHFAFVELRSIELTTACMNLDGVAFRGQPLKVRRPNDYNPATVPTELGPIPQLNLAALGIVSTTVCDGPGKIFIGGLPYHLNEEQIKELLQAFGPLRSFHLVKELSSNMSKGYGFCEYLDPNSTDAACLGLNEMKLGDKTLTVRRAMTPEYTS----------------------------------KAAGGGGSSSHPNPGMELA----------SQAALQALSMAGLG---------APSGPSGA-----------PSRVVVLLNMVTPEELDDEDEYADIVDDIKSECERFGRVISIVLPRPRDGFYS-AVGKVFVEYDAVPSAQAAAAELHGRGFSNRIVAVEYMDEHKYARREF 615          
BLAST of mRNA_L-elsbetiae_contig57.14080.1 vs. uniprot
Match: A0A0P1B7G2_PLAHL (Splicing factor U2AF subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B7G2_PLAHL)

HSP 1 Score: 320 bits (821), Expect = 8.910e-98
Identity = 215/497 (43.26%), Postives = 280/497 (56.34%), Query Frame = 0
Query:  191 RIERRRKKRALRPSNFDVKPDDPTAVALLEASAQQML---VSRGSGVMQPAA---PQLMAR---------------------LPGASNQQTRHARRLYIGGCPKTTEEEMTGFFNDVINRALEYPVDGGPVASVYVSQEKAFAFLELKTMELATAVLELDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISSTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAMACEGLHGMQLGDKTLTVRPATDRGSTSGQHQQXXXXXXXXXXXXXXXXXXYXHQQLQPLQMSGAAMGLVPPTQQEQMQLAQAMAALDPNAAQAAMANLVQAGAGGXXXXXXXXAPSAAAESAVAANLIRAIPPTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASRAVGKVFVEYDSRESAQKAALSLAGRQFGANIVKVEYVNEEKFARRE 660
            R+ RRRKK     SNFDV+P   T       +AQ +L   ++  SG + PA+   PQ +                       LPG S QQTRHARRLY+GG  + +E E+T FFNDVI+RAL    +GG V SVY+++E+ FAF+EL+T+EL TA + LDG+ Y    LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S+TV D   K+F+GGLPY+L+E+QV+ELL AFGPL+SFHLV++  S  SKGYGFCEY++  VT  AC GL+ M+LGDKTLTVR A                                       Q +  A+     T    ++L      LDP+  QAAM  +  AG                         +   PPTRV+V+ NMVT  EL D +EY DIVDDI+ EC   G V S+++PRP +   S AVGKV+VE+   +SAQ AA  L GR F    V VE+++E K+ARRE
Sbjct:  144 RVVRRRKK-----SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGSVGPASFGPPQNVMTSTGNSSAQSSYAHASVATAYGLPGMS-QQTRHARRLYVGGIGEISEAEITVFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYNGQPLKIRRPNDYNPGTVPTDLGPIPQLNLAALGIVSTTVSDGPGKIFVGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDVNVTDAACLGLNDMRLGDKTLTVRRAMS-------------------------------------QENAKAVASAAGTVNTGLELG-----LDPS--QAAMQAMSLAGI----------------------TSVPLGPPTRVIVLHNMVTPEELEDEEEYADIVDDIKGECERFGAVPSLLLPRPRDGVLS-AVGKVYVEFSDVQSAQNAAAELHGRGFSNRTVAVEFMDEGKYARRE 567          
BLAST of mRNA_L-elsbetiae_contig57.14080.1 vs. uniprot
Match: K3WB93_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WB93_GLOUD)

HSP 1 Score: 320 bits (821), Expect = 2.120e-97
Identity = 208/481 (43.24%), Postives = 270/481 (56.13%), Query Frame = 0
Query:  204 SNFDVKPDDPTAVALLEASAQQML---VSRGSGVMQPA---------APQLMARLPGA--------SNQQTRHARRLYIGGCPKTTEEEMTGFFNDVINRALEYPVDGGPVASVYVSQEKAFAFLELKTMELATAVLELDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISSTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAMACEGLHGMQLGDKTLTVRPATDRGSTSGQHQQXXXXXXXXXXXXXXXXXXYXHQQLQPLQMSGAAMGLVPPTQQEQMQLAQAMAALDPNAAQAAMANLVQAGAGGXXXXXXXXAPSAAAESAVAANLIRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASRAVGKVFVEYDSRESAQKAALSLAGRQFGANIVKVEYVNEEKFARREF 661
            S FDV+P   T       +AQ +L   ++  SG + PA         AP   A +PG         ++QQTRHARR+Y+GG     E E++ FFNDVI+RAL    +GG V SVY+++E+ FAF+EL+++EL TA + LDG+ ++   LK+RRP+DYNP  VP   GPIP LNL+ LGI+S+TV D   KVFIGGLPY+L+++QV+ELL AFGPLKSFHLV++  S  SKGYGFCEY++  VT  AC GL+ M+LGDKTLTVR A  + +                                    SG  MGL                    N + AA+  +  AG G                       I ++P   PTRV+V+LNMVT  EL D +EY DIVDDI+ EC   G V S+++PRP +   S AVGKVFVEY    SAQ AA  L GR F    V VEY++E K+ARR+F
Sbjct:  188 SYFDVRPPGVTEENAAAYAAQAILQQNMAALSGAVGPASFGPPPPPIAPPAHAIVPGVVASHTFGGNSQQTRHARRIYVGGIGDVNEAEISEFFNDVIDRALGERQEGGAVVSVYINRERHFAFVELRSIELTTACMNLDGVSFRGQPLKIRRPNDYNPSTVPKDLGPIPTLNLAALGIVSTTVSDGPGKVFIGGLPYHLNDEQVKELLQAFGPLKSFHLVKELNSNLSKGYGFCEYVDINVTDSACLGLNDMKLGDKTLTVRRAMSQENAKAVASAAGTVN------------------------SGLEMGL--------------------NPSHAALQAMNLAGFG-----------------------IPSMPLGTPTRVIVLLNMVTPEELEDEEEYADIVDDIKGECERFGRVNSIVLPRPRDGFYS-AVGKVFVEYGDVPSAQAAAAELHGRGFSNRTVAVEYMDEHKYARRDF 600          
BLAST of mRNA_L-elsbetiae_contig57.14080.1 vs. uniprot
Match: D0MXQ4_PHYIT (Splicing factor U2AF subunit n=3 Tax=Phytophthora TaxID=4783 RepID=D0MXQ4_PHYIT)

HSP 1 Score: 318 bits (815), Expect = 6.850e-97
Identity = 212/501 (42.32%), Postives = 275/501 (54.89%), Query Frame = 0
Query:  191 RIERRRKKRALRPSNFDVKPDDPT--------AVALLEASAQQMLVSRGSGVMQPAAPQLMA---RLPGAS-----------------NQQTRHARRLYIGGCPKTTEEEMTGFFNDVINRALEYPVDGGPVASVYVSQEKAFAFLELKTMELATAVLELDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISSTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAMACEGLHGMQLGDKTLTVRPATDRGSTSGQHQQXXXXXXXXXXXXXXXXXXYXHQQLQPLQMSGAAMGLVPPTQQEQMQLAQAMAALDPNAAQAAMANLVQAGAGGXXXXXXXXAPSAAAESAVAANLIRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASRAVGKVFVEYDSRESAQKAALSLAGRQFGANIVKVEYVNEEKFARRE 660
            RI RRRKK     SNFDV+P   T        A A+L+ +   +  S G+    P  PQ        P AS                 +QQTRHARRLY+GG  + +E E+T FFNDVI+RAL    +GG V SVY+++E+ FAF+EL+++EL TA + LDG+ Y    LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S+TV D   K+FIGGLPY+L+E+QV+ELL AFGPL+SFHLV++  S  SKGYGFCEY++  VT  AC GL+ MQLGDKTLTVR A  + +                                    +G  MGL P                                             S AA  A++   I ++P   P+RV+V+LNMVT  EL D +EY DI+DDI+ EC   G V S+++PRP +   S AVGKVFVE+   +SAQ AA  L GR F    V VE+++E K+ARRE
Sbjct:  144 RIVRRRKK-----SNFDVRPPGVTEKNAAAYAAQAILQQNMAALSGSVGASSFGP--PQTSTPTGNAPPASLHTHSNPNPGYGFSSGLSQQTRHARRLYVGGIGEISEPEITAFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRSIELTTACMNLDGVSYNGQPLKIRRPNDYNPATVPKDLGPIPQLNLAALGIVSTTVSDGPGKIFIGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDINVTDAACIGLNDMQLGDKTLTVRRAMSQENAKAVASAAGTVN------------------------TGLEMGLDP---------------------------------------------SLAAMQAMSMAGIPSVPLGTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGVLS-AVGKVFVEFADVQSAQAAATELHGRGFSNRTVAVEFMDEGKYARRE 567          
BLAST of mRNA_L-elsbetiae_contig57.14080.1 vs. uniprot
Match: H3GIY2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIY2_PHYRM)

HSP 1 Score: 322 bits (824), Expect = 1.550e-96
Identity = 214/503 (42.54%), Postives = 275/503 (54.67%), Query Frame = 0
Query:  191 RIERRRKKRALRPSNFDVKP-----DDPTAVALLEASAQQMLVSRGS------GVMQPAAPQLMAR-------------------LPGASNQQTRHARRLYIGGCPKTTEEEMTGFFNDVINRALEYPVDGGPVASVYVSQEKAFAFLELKTMELATAVLELDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISSTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAMACEGLHGMQLGDKTLTVRPATDRGSTSGQHQQXXXXXXXXXXXXXXXXXXYXHQQLQPLQMSGAAMGLVPPTQQEQMQLAQAMAALDPNAAQAAMANLVQAGAGGXXXXXXXXAPSAAAESAVAANLIRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASRAVGKVFVEYDSRESAQKAALSLAGRQFGANIVKVEYVNEEKFARRE 660
            RI RRRKK     SNFDV+P     ++  A A      Q M    GS      G  Q ++P +                       PG S QQTRHARRLY+GG  +  E E+T FFNDVI+RAL    +GG V SVY+++E+ FAF+EL+T+EL TA + LDG+ Y    LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S+TV D   K+FIGGLPY+L+E+QV+ELL AFGPL+SFHLV++  S  SKGYGFCEY++  VT  AC GL+ M+LGDKTLTVR A  + +                                    +G  MGL P                    ++AAM  +  AG                         I ++P   P+RV+V+LNMVT  EL D +EY DI+DDI+ EC   G V S+++PRP +   S AVGKVFVE+   +SAQ AA  L GR F    V VEY++E K+ARRE
Sbjct:  292 RIVRRRKK-----SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGSVGPASFGPPQTSSPSMSTGNAPPAPMYNHSHQASTGYGFPGQS-QQTRHARRLYVGGIGEIAEPEITAFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVAYNGQPLKIRRPNDYNPATVPKDLGPIPQLNLAALGIVSTTVSDGPGKIFIGGLPYHLNEEQVKELLQAFGPLRSFHLVKEVSSNLSKGYGFCEYMDINVTDAACIGLNDMRLGDKTLTVRRAMSQENAKAVASAAGTVN------------------------TGLEMGLDP--------------------SRAAMQAMSLAG-------------------------IPSVPLGTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGIPS-AVGKVFVEFGEVQSAQSAATELHGRGFSNRTVAVEYMDEGKYARRE 718          
BLAST of mRNA_L-elsbetiae_contig57.14080.1 vs. uniprot
Match: A0A6A3P0N3_9STRA (Splicing factor U2AF subunit n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P0N3_9STRA)

HSP 1 Score: 318 bits (814), Expect = 1.610e-96
Identity = 211/505 (41.78%), Postives = 277/505 (54.85%), Query Frame = 0
Query:  191 RIERRRKKRALRPSNFDVKPDDPT--------AVALLEASAQQMLVSRGSGVM-QPAAPQL----MARLPGAS-------------------NQQTRHARRLYIGGCPKTTEEEMTGFFNDVINRALEYPVDGGPVASVYVSQEKAFAFLELKTMELATAVLELDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISSTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAMACEGLHGMQLGDKTLTVRPATDRGSTSGQHQQXXXXXXXXXXXXXXXXXXYXHQQLQPLQMSGAAMGLVPPTQQEQMQLAQAMAALDPNAAQAAMANLVQAGAGGXXXXXXXXAPSAAAESAVAANLIRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASRAVGKVFVEYDSRESAQKAALSLAGRQFGANIVKVEYVNEEKFARRE 660
            R+ RRRKK     SNFDV+P   T        A A+L+ +   +  S G G    P A  +    +  +P +S                   +QQTRHARRLY+GG  + +E E+T FFNDVI+RAL    DGG V SVY+++E+ FAF+EL+T+EL TA + LDG+ Y    LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S+TV D   K+FIGGLPY+L+E+QV+ELL AFGPL+SFHLV++  S  SKGYGFCEY++  VT  AC GL+ M+LGDKTLTVR A  + +                                    +G  MGL P                                             S AA  A++   I ++P   P+RV+V+LNMVT  EL D +EY DI+DDI+ EC   G V S+++PRP +   S AVGKVFVE+   +SAQ AA  L GR F    V VE+++E K+ARRE
Sbjct:  157 RVVRRRKK-----SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGSVGPGSFGTPQASSVPSTGLCNIPSSSAQSTYNSHQDNAAYGFTGHSQQTRHARRLYVGGIGEISEPEITAFFNDVIDRALGEKQDGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYNGQPLKIRRPNDYNPATVPKDLGPIPQLNLAALGIVSTTVSDGPGKIFIGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDINVTDAACLGLNDMRLGDKTLTVRRAMSQENAKAVASAAGTVN------------------------TGLEMGLDP---------------------------------------------SRAALQAMSLAGIPSLPLGAPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGIPS-AVGKVFVEFGDVQSAQNAATELHGRGFSNRTVIVEFMDEGKYARRE 586          
BLAST of mRNA_L-elsbetiae_contig57.14080.1 vs. uniprot
Match: W2PYB1_PHYPN (Splicing factor U2AF subunit n=7 Tax=Phytophthora TaxID=4783 RepID=W2PYB1_PHYPN)

HSP 1 Score: 317 bits (811), Expect = 2.450e-96
Identity = 208/499 (41.68%), Postives = 276/499 (55.31%), Query Frame = 0
Query:  191 RIERRRKKRALRPSNFDVKPDDPTAVALLEASAQQML---VSRGSGVMQPAA------PQLMARLPGAS-----------------NQQTRHARRLYIGGCPKTTEEEMTGFFNDVINRALEYPVDGGPVASVYVSQEKAFAFLELKTMELATAVLELDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISSTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAMACEGLHGMQLGDKTLTVRPATDRGSTSGQHQQXXXXXXXXXXXXXXXXXXYXHQQLQPLQMSGAAMGLVPPTQQEQMQLAQAMAALDPNAAQAAMANLVQAGAGGXXXXXXXXAPSAAAESAVAANLIRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASRAVGKVFVEYDSRESAQKAALSLAGRQFGANIVKVEYVNEEKFARRE 660
            RI RRRKK     SNFDV+P   T       +AQ +L   ++  SG + PA+      P     +P A                  +QQTRHARRLY+GG  + +E E+T FFNDVI+RAL    +GG V SVY+++E+ FAF+EL+++EL TA + LDG+ Y    LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S+TV D   K+FIGGLPY+L+E+QV+ELL AFGPL+SFHLV++  S  SKGYGFCEY++  VT  AC GL+ M+LGDKTLTVR A  + +                                    +G  MGL P                                             S AA  A++   I ++P   P+RV+V+LNMVT  EL D +EY DI+DDI+ EC   G V S+++PRP +   S AVGKV+VE+   +SAQ AA  L GR F    V VE+++E K+ARR+
Sbjct:  141 RIVRRRKK-----SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGSVGPASFGAPPNPTPTGNVPAAPMYSHSHAGPGYGFSSGMSQQTRHARRLYVGGIGEISEAEITAFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRSIELTTACMNLDGVSYNGQPLKIRRPNDYNPATVPKDLGPIPQLNLAALGIVSTTVSDGPGKIFIGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDINVTDAACLGLNDMRLGDKTLTVRRAMSQENAKAVASAAGTVN------------------------TGLEMGLDP---------------------------------------------SLAAMQAMSMAGIPSVPLGTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGIPS-AVGKVYVEFGDVQSAQAAATELHGRGFSNRTVAVEFMDEGKYARRQ 564          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig57.14080.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEZ9_ECTSI5.520e-27187.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8K1C271_PYTOL4.500e-10344.49Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A484DRL9_BRELC1.090e-10243.93Splicing factor U2AF subunit n=1 Tax=Bremia lactuc... [more]
A0A5D6XX73_9STRA3.320e-10143.95Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A0P1B7G2_PLAHL8.910e-9843.26Splicing factor U2AF subunit n=1 Tax=Plasmopara ha... [more]
K3WB93_GLOUD2.120e-9743.24Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
D0MXQ4_PHYIT6.850e-9742.32Splicing factor U2AF subunit n=3 Tax=Phytophthora ... [more]
H3GIY2_PHYRM1.550e-9642.54Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6A3P0N3_9STRA1.610e-9641.78Splicing factor U2AF subunit n=8 Tax=Phytophthora ... [more]
W2PYB1_PHYPN2.450e-9641.68Splicing factor U2AF subunit n=7 Tax=Phytophthora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 563..649
e-value: 0.13
score: 14.3
coord: 259..335
e-value: 0.087
score: 16.0
coord: 373..446
e-value: 1.2E-19
score: 81.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 374..443
e-value: 2.0E-14
score: 53.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 563..653
score: 10.497
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 258..339
score: 10.821
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 372..450
score: 15.477
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 253..351
e-value: 9.0E-17
score: 63.1
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 558..662
e-value: 4.1E-31
score: 109.0
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 367..483
e-value: 3.2E-23
score: 84.2
IPR006529U2 snRNP auxilliary factor, large subunit, splicing factorTIGRFAMTIGR01642TIGR01642coord: 189..661
e-value: 1.4E-98
score: 328.5
NoneNo IPR availablePANTHERPTHR23139:SF9SPLICING FACTOR U2AF 65 KDA SUBUNITcoord: 90..661
NoneNo IPR availablePANTHERPTHR23139RNA-BINDING PROTEINcoord: 90..661
NoneNo IPR availableSUPERFAMILY81995beta-sandwich domain of Sec23/24coord: 453..518
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 368..654
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 258..341

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig57contigL-elsbetiae_contig57:27315..38592 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig57.14080.1mRNA_L-elsbetiae_contig57.14080.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig57 27039..38757 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig57.14080.1 ID=prot_L-elsbetiae_contig57.14080.1|Name=mRNA_L-elsbetiae_contig57.14080.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=663bp
MAGRGRGREMTMPAWMTKEGVPAQPAPIAPPTLGGLNGNGNGNGYPMAPM
APAQGQFVDPPPPQQQPAYASVQHQAVPPPPVPAPAPAPERERDGGRDSR
RRRSPSPRRDRDRDSRRRGGSRSPPRGGGGGGGYGRSGGGGYGGGGGGGY
GGDRGGGYGRGGRGGGGGTGGGGGGGRFENPRNEALNDRERIERRRKKRA
LRPSNFDVKPDDPTAVALLEASAQQMLVSRGSGVMQPAAPQLMARLPGAS
NQQTRHARRLYIGGCPKTTEEEMTGFFNDVINRALEYPVDGGPVASVYVS
QEKAFAFLELKTMELATAVLELDGIVYKETQLKMRRPSDYNPQLVPAASG
PIPKLNLSVLGIISSTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKS
FHLVRDPGSPTSKGYGFCEYLNAGVTAMACEGLHGMQLGDKTLTVRPATD
RGSTSGQHQQQHQQQHQHQQQQQQQQQHYQHQQLQPLQMSGAAMGLVPPT
QQEQMQLAQAMAALDPNAAQAAMANLVQAGAGGGAGGGAGVAPSAAAESA
VAANLIRAIPPTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVL
SVIVPRPGEADASRAVGKVFVEYDSRESAQKAALSLAGRQFGANIVKVEY
VNEEKFARREFD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR006529U2AF_lg
IPR035979RBD_domain_sf