prot_L-elsbetiae_contig5694.14067.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5694.14067.1
Unique Nameprot_L-elsbetiae_contig5694.14067.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length117
Homology
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BLAST of mRNA_L-elsbetiae_contig5694.14067.1 vs. uniprot
Match: D7G168_ECTSI (L-ascorbate peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G168_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 1.720e-7
Identity = 43/59 (72.88%), Postives = 50/59 (84.75%), Query Frame = 0 
Query:    1 MKVVAACVAAAVAVDCASAFVAPVVSSSFASSSLSRSS-RARAPG-LRMST-VSAESKV 56
            MK  AACV A  A+DCASAFVAPVV+SSFASSSLSR+S R+RAPG LRMS+ VS ++KV
Sbjct:   35 MKAFAACVTAVAALDCASAFVAPVVTSSFASSSLSRTSARSRAPGVLRMSSAVSTDAKV 93
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5694.14067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G168_ECTSI1.720e-772.88L-ascorbate peroxidase n=2 Tax=Ectocarpus TaxID=28... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..116
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.523

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5694contigL-elsbetiae_contig5694:7472..8063 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5694.14067.1mRNA_L-elsbetiae_contig5694.14067.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5694 7142..8063 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5694.14067.1 ID=prot_L-elsbetiae_contig5694.14067.1|Name=mRNA_L-elsbetiae_contig5694.14067.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=117bp
MKVVAACVAAAVAVDCASAFVAPVVSSSFASSSLSRSSRARAPGLRMSTV
SAESKVILPHLLNQRVFSLLREKINLFWPHPGQRRIFLHLNSALSLTARH
VHEANMRRKGRATIDA*
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