prot_L-elsbetiae_contig569.14057.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig569.14057.1
Unique Nameprot_L-elsbetiae_contig569.14057.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length145
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig569.14057.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 68..88
e-value: 260.0
score: 1.7
coord: 110..133
e-value: 0.47
score: 19.5
coord: 89..109
e-value: 15.0
score: 11.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 10..143
e-value: 1.6E-17
score: 65.4
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 67..113
e-value: 5.6E-8
score: 32.4
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 113..133
score: 6.742
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 91..112
score: 7.527
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 67..88
score: 4.724
NoneNo IPR availablePANTHERPTHR45712FAMILY NOT NAMEDcoord: 66..140
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..144
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.455
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 40..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig569contigL-elsbetiae_contig569:5374..7254 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig569.14057.1mRNA_L-elsbetiae_contig569.14057.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig569 2334..8101 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig569.14057.1 ID=prot_L-elsbetiae_contig569.14057.1|Name=mRNA_L-elsbetiae_contig569.14057.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=145bp
MRFVRVAAVLSAICIDKIRAVAGESTCLSDGRCILGTSTLNLCNCDLEDN
DMDGIAECIADSQSAGTLQVLRICNNFLTYLASDVLQGLPQLERLHLNEN
NLTEVPSLHFEHLFYLRLDNNYISSLESDAFQGTPKIEQLTTSP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt