prot_L-elsbetiae_contig567.14028.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig567.14028.1
Unique Nameprot_L-elsbetiae_contig567.14028.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length226
Homology
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BLAST of mRNA_L-elsbetiae_contig567.14028.1 vs. uniprot
Match: D8LJE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE2_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 1.210e-76
Identity = 148/213 (69.48%), Postives = 160/213 (75.12%), Query Frame = 0 
Query:   14 PRRLRQSWGASASA-RGESSGGSRRGSTDSAXXXXXXXXXXXXXXPGGSGAFVAPSKLQEASMWSTAVEQAALERRMRQKFDAGAVAEPNEPVYRGAAAAAVNIHPLARTFEGLVPVSLDAPPPRPKLKGKQVSKSHLSKVQEQRITEEDLAFDDMEPDFDCSAIAGFGSDSGGRTWPHEELEWYGGRSSFAELDASWTSMASDRVWSLGRRL 225
            PRRLRQ+WG SAS+ RG  +   RRGS+  A                   +FVAPS++QE S+WSTA EQA LERRM ++FD   V EP  PVYR AAAAAVNIHPLA+TFEGLVPVSLDAPPPRPK KGKQVSKSHLSKVQEQRITEEDLAFD MEPD  CSAI GFGS + GR WPHEELEWYGGR  FAELD S  S ASDRVWSLGRRL
Sbjct:  561 PRRLRQTWGTSASSPRGSRA---RRGSSTDASD---------------DASFVAPSRMQEPSLWSTAAEQAELERRMTEEFDGSGVPEPVAPVYRAAAAAAVNIHPLAKTFEGLVPVSLDAPPPRPKRKGKQVSKSHLSKVQEQRITEEDLAFDGMEPD--CSAIIGFGSSTAGRMWPHEELEWYGGRKMFAELDRS--STASDRVWSLGRRL 751
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BLAST of mRNA_L-elsbetiae_contig567.14028.1 vs. uniprot
Match: A0A6H5L2I0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2I0_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 1.130e-68
Identity = 141/218 (64.68%), Postives = 153/218 (70.18%), Query Frame = 0 
Query:   11 NVRPRRLRQSWGASASARGESSGGSRRGSTDSAXXXXXXXXXXXXXXPGGSGAFVAPSKLQEASMWSTAVEQAALERRMRQ---KFDAGAVAEPNEPVYRGAAAAAVNIHPLARTFEGLVPVSLDAPPPRPKLKGKQVSKSHLSKVQEQRITEEDLAFDDMEPDFDCSAIAGFGSDSGGRTWPHEELEWYGGRSSFAELDASWTSMASDRVWSLGRRL 225
            N  P RLRQ+WG S S+    S  +RRG +  A                   AFVAPS++QE S+WSTA EQ  LERRM +   +FD GAV EP  P YR AAAAAVNIHPLA+TFEGLVPVSLDAPPPRP  KGKQVSK HLSKVQEQRITEEDLAFD MEPD  CS I GFGS + GR WP+EELEWYGGR   AELD S  S ASDRVWSLGRRL
Sbjct:  529 NGTPGRLRQTWGTSTSS--PRSNRARRGCSMDASDD----------------AFVAPSRMQEPSLWSTAAEQVELERRMTEATHEFDGGAVPEPAAPTYRAAAAAAVNIHPLAKTFEGLVPVSLDAPPPRPMRKGKQVSKRHLSKVQEQRITEEDLAFDGMEPD--CSVIMGFGSSTVGRMWPYEELEWYGGRKMSAELDHS--STASDRVWSLGRRL 724
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig567.14028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJE2_ECTSI1.210e-7669.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2I0_9PHAE1.130e-6864.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig567contigL-elsbetiae_contig567:28008..30943 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig567.14028.1mRNA_L-elsbetiae_contig567.14028.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig567 27592..32416 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig567.14028.1 ID=prot_L-elsbetiae_contig567.14028.1|Name=mRNA_L-elsbetiae_contig567.14028.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=226bp
MSPSAPSASENVRPRRLRQSWGASASARGESSGGSRRGSTDSASSSGEGF
GGGFGPGPGGSGAFVAPSKLQEASMWSTAVEQAALERRMRQKFDAGAVAE
PNEPVYRGAAAAAVNIHPLARTFEGLVPVSLDAPPPRPKLKGKQVSKSHL
SKVQEQRITEEDLAFDDMEPDFDCSAIAGFGSDSGGRTWPHEELEWYGGR
SSFAELDASWTSMASDRVWSLGRRL*
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