prot_L-elsbetiae_contig5650.13996.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5650.13996.1
Unique Nameprot_L-elsbetiae_contig5650.13996.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length120
Homology
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BLAST of mRNA_L-elsbetiae_contig5650.13996.1 vs. uniprot
Match: D8LDF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF5_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 7.820e-28
Identity = 73/120 (60.83%), Postives = 85/120 (70.83%), Query Frame = 0 
Query:    1 QDGGAARTATTTASAAADTLMSLAKRPAAKLALASFLTSAVSAGEVSLSSAMAGTGGSGSRGWRALVAHAFAELELLPLKSYSEEFSSGLAPVNTLRGLWRTRETRSDGSVLPQEGGRLG 120
            +D  A  T TT     A+T+ SLA++  A +ALA+ LT AV  GEV++S  +AG GG       A    AFAELE LPLKSYSEEFSSGLAPVNT+RGLWRTRETR+DGS LPQE GRLG
Sbjct:  102 RDSNAVTTTTT-----AETVASLARQALATVALAAVLTPAVFIGEVTVSPLLAGKGGV------APPTAAFAELEPLPLKSYSEEFSSGLAPVNTVRGLWRTRETRNDGSALPQEAGRLG 210
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5650.13996.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDF5_ECTSI7.820e-2860.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5650contigL-elsbetiae_contig5650:4986..5872 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5650.13996.1mRNA_L-elsbetiae_contig5650.13996.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5650 4986..5872 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5650.13996.1 ID=prot_L-elsbetiae_contig5650.13996.1|Name=mRNA_L-elsbetiae_contig5650.13996.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=120bp
QDGGAARTATTTASAAADTLMSLAKRPAAKLALASFLTSAVSAGEVSLSS
AMAGTGGSGSRGWRALVAHAFAELELLPLKSYSEEFSSGLAPVNTLRGLW
RTRETRSDGSVLPQEGGRLG
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