prot_L-elsbetiae_contig5630.13973.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5630.13973.1
Unique Nameprot_L-elsbetiae_contig5630.13973.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length40
Homology
BLAST of mRNA_L-elsbetiae_contig5630.13973.1 vs. uniprot
Match: D8LBL3_ECTSI (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBL3_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 7.320e-15
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0
Query:    4 FGGNEGHDPHILYTLSALQVMALLGELDRVDKDKV 38
            FGGNEGHDPHILYTLSALQVMALLGELDRVDKDKV
Sbjct:   91 FGGNEGHDPHILYTLSALQVMALLGELDRVDKDKV 125          
BLAST of mRNA_L-elsbetiae_contig5630.13973.1 vs. uniprot
Match: A0A7S1CLZ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CLZ2_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.090e-10
Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    4 FGGNEGHDPHILYTLSALQVMALLGELDRVDKDK 37
            FGGNEGHDPH+LYTLSA+Q++AL G LDRVD DK
Sbjct:   84 FGGNEGHDPHMLYTLSAVQLLALCGALDRVDGDK 117          
BLAST of mRNA_L-elsbetiae_contig5630.13973.1 vs. uniprot
Match: A0A7S1XAH0_9RHOD (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XAH0_9RHOD)

HSP 1 Score: 61.6 bits (148), Expect = 4.340e-10
Identity = 26/35 (74.29%), Postives = 33/35 (94.29%), Query Frame = 0
Query:    4 FGGNEGHDPHILYTLSALQVMALLGELDRVDKDKV 38
            FGGNE  DPH+LYTLSA+QV+A+LGEL+R+D+DKV
Sbjct:   49 FGGNEDQDPHLLYTLSAVQVLAMLGELERLDRDKV 83          
BLAST of mRNA_L-elsbetiae_contig5630.13973.1 vs. uniprot
Match: A0A7S2GW51_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GW51_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 5.520e-10
Identity = 23/34 (67.65%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    4 FGGNEGHDPHILYTLSALQVMALLGELDRVDKDK 37
            FGGN+GHDPH+LYTLSALQ++A+  ELDR+D ++
Sbjct:   45 FGGNKGHDPHMLYTLSALQILAIANELDRIDPER 78          
BLAST of mRNA_L-elsbetiae_contig5630.13973.1 vs. uniprot
Match: F0YFP4_AURAN (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFP4_AURAN)

HSP 1 Score: 60.5 bits (145), Expect = 1.360e-9
Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    1 CDRFGGNEGHDPHILYTLSALQVMALLGELDRVDKDK 37
            C  FGG EGHDPH+LYTLSALQ++ALLG LD+ D  K
Sbjct:   86 CGGFGGGEGHDPHLLYTLSALQILALLGALDKCDGAK 122          
BLAST of mRNA_L-elsbetiae_contig5630.13973.1 vs. uniprot
Match: A0A836C9T0_9STRA (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T0_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 3.400e-9
Identity = 27/31 (87.10%), Postives = 28/31 (90.32%), Query Frame = 0
Query:    4 FGGNEGHDPHILYTLSALQVMALLGELDRVD 34
            FGG EGHDPHILYTLSALQV+ALLGEL R D
Sbjct:   75 FGGGEGHDPHILYTLSALQVLALLGELRRAD 105          
BLAST of mRNA_L-elsbetiae_contig5630.13973.1 vs. uniprot
Match: A0A8B9AZD5_PHODC (geranylgeranyl transferase type-2 subunit beta 1-like n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B9AZD5_PHODC)

HSP 1 Score: 56.6 bits (135), Expect = 3.420e-9
Identity = 25/38 (65.79%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    1 CDRFGGNEGHDPHILYTLSALQVMALLGELDRVDKDKV 38
            C  FGGN GHDPH+LYTLSA+QV+AL   LD +D +KV
Sbjct:   69 CGGFGGNIGHDPHLLYTLSAVQVLALFDRLDVLDIEKV 106          
BLAST of mRNA_L-elsbetiae_contig5630.13973.1 vs. uniprot
Match: A0A0D2PWN9_GOSRA (Uncharacterized protein n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A0D2PWN9_GOSRA)

HSP 1 Score: 58.2 bits (139), Expect = 3.530e-9
Identity = 26/36 (72.22%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    4 FGGNEGHDPHILYTLSALQVMALLGELDRVDKDKVC 39
            F GN GHDPHILYTLSA+QV+AL  +LD +D DKVC
Sbjct:   71 FSGNIGHDPHILYTLSAVQVLALFNKLDVLDIDKVC 106          
BLAST of mRNA_L-elsbetiae_contig5630.13973.1 vs. uniprot
Match: A0A4D9D171_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D171_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 9.940e-9
Identity = 21/35 (60.00%), Postives = 32/35 (91.43%), Query Frame = 0
Query:    4 FGGNEGHDPHILYTLSALQVMALLGELDRVDKDKV 38
            FGGN+GHDPH+LYTLSA+Q++A+   L+++D+D+V
Sbjct:  116 FGGNQGHDPHLLYTLSAVQILAIADALEKIDQDRV 150          
BLAST of mRNA_L-elsbetiae_contig5630.13973.1 vs. uniprot
Match: A0A8J5FK70_ZINOF (Uncharacterized protein n=6 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5FK70_ZINOF)

HSP 1 Score: 57.8 bits (138), Expect = 1.140e-8
Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    4 FGGNEGHDPHILYTLSALQVMALLGELDRVDKDKV 38
            FGGN GHDPH+LYTLSA+QV+ALL  LD +D DKV
Sbjct:   72 FGGNVGHDPHLLYTLSAVQVLALLNRLDVLDIDKV 106          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5630.13973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBL3_ECTSI7.320e-15100.00Geranylgeranyl transferase type-2 subunit beta n=1... [more]
A0A7S1CLZ2_9STRA1.090e-1079.41Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S1XAH0_9RHOD4.340e-1074.29Geranylgeranyl transferase type-2 subunit beta n=1... [more]
A0A7S2GW51_9STRA5.520e-1067.65Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
F0YFP4_AURAN1.360e-970.27Geranylgeranyl transferase type-2 subunit beta n=1... [more]
A0A836C9T0_9STRA3.400e-987.10Geranylgeranyl transferase type-2 subunit beta n=1... [more]
A0A8B9AZD5_PHODC3.420e-965.79geranylgeranyl transferase type-2 subunit beta 1-l... [more]
A0A0D2PWN9_GOSRA3.530e-972.22Uncharacterized protein n=1 Tax=Gossypium raimondi... [more]
A0A4D9D171_9STRA9.940e-960.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A8J5FK70_ZINOF1.140e-874.29Uncharacterized protein n=6 Tax=Zingiber officinal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.50.10.20coord: 1..40
e-value: 2.1E-7
score: 32.2
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidSUPERFAMILY48239Terpenoid cyclases/Protein prenyltransferasescoord: 4..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5630contigL-elsbetiae_contig5630:11947..12066 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5630.13973.1mRNA_L-elsbetiae_contig5630.13973.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5630 11947..12066 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5630.13973.1 ID=prot_L-elsbetiae_contig5630.13973.1|Name=mRNA_L-elsbetiae_contig5630.13973.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=40bp
CDRFGGNEGHDPHILYTLSALQVMALLGELDRVDKDKVCV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008930Terpenoid_cyclase/PrenylTrfase