prot_L-elsbetiae_contig562.13955.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig562.13955.1
Unique Nameprot_L-elsbetiae_contig562.13955.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length461
Homology
BLAST of mRNA_L-elsbetiae_contig562.13955.1 vs. uniprot
Match: A0A6H5KDC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC6_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 1.480e-97
Identity = 259/416 (62.26%), Postives = 291/416 (69.95%), Query Frame = 0
Query:    1 MRSTNRGDVPNPHVAPGQDKNAADPSEDVVFDPGSLSFVKDWVVDGGDSGSAGAGAVDIEPAREDPRQSNPNRRLGVGAQPKKSKQERPEPSALEKKLLRKRQRQELSDAIAGEMDTHGVVSDDKDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAAAKKKSXXXXXXXQDGAEAAVTAVTGGGDETAAXXXXXXXXXXXRKXXXXXXXXXSAXTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVEA-----------------ETADQGEPKKQRRGWGKARPKPA-AASVPARGADQSSDAVEGERKVDERRPRKKTRSRQKNIRKDKRPMEKRPSYLRAGDPEFSGRGLTDETRKFLGLPADDFGNAPPAGWGKPGKMAATPVCLVDKKPRRLPEHLAAEGGD 398
            MR+TNRGDVP  HV P Q K  A+  +DVVFD GSLSFV+DWVVDGGD+ +A A A ++EP REDPR++NPNRRLGVGA PKK KQ+RPEPSALEKK+LRKRQRQELSDAIAGEMDTHGVV DDK+G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AA               EA V +  G    + A             XXXXXXXXX  X  XXXXXXXXXXXXXXXXXXXXXX          V E                  ETA+ GE KKQRRGW KAR K A AA+  A   DQ+ DA     ++DE R RKKTRSRQKNIRKD RP ++RP+YLRA +PEFSGRGLT+ETRKFLGLP  DFG+APPAGWGK GK+  T   ++DKKPRRLP++L  + GD
Sbjct:    1 MRTTNRGDVPARHVPPSQAKGVAEDVDDVVFDAGSLSFVQDWVVDGGDTSAAAAAAAEVEPRREDPRKTNPNRRLGVGAHPKKPKQDRPEPSALEKKMLRKRQRQELSDAIAGEMDTHGVVDDDKEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPAATAAEDTKSRKKNGAVEAVVGSGNGNSGGSCAGDAVDDGEKPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPDKKFATVVEETSPMTAAEAEAGGGGKGTETAEPGESKKQRRGWRKARSKSAGAAADTAENVDQAKDAGGRSGRMDEHRSRKKTRSRQKNIRKDNRPADERPAYLRAENPEFSGRGLTEETRKFLGLPQADFGDAPPAGWGKHGKVRPTASWVIDKKPRRLPKYLEPDAGD 416          
BLAST of mRNA_L-elsbetiae_contig562.13955.1 vs. uniprot
Match: D7G6V5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6V5_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 1.490e-52
Identity = 99/143 (69.23%), Postives = 113/143 (79.02%), Query Frame = 0
Query:  257 AETADQGEPKKQRRGWGKARPKPA-AASVPARGADQSSDAVEGERKVDERRPRKKTRSRQKNIRKDKRPMEKRPSYLRAGDPEFSGRGLTDETRKFLGLPADDFGNAPPAGWGKPGKMAATPVCLVDKKPRRLPEHLAAEGGD 398
            A TA+ GE KKQRRGWGKAR   A AA+  A   + + DA E   + DE RPRKKTRSRQKNIRKDKRP +KRP+YLRAGDPEFSGRGLT+ETRKFLGLP DDFG+APPAGWGKPGK+  T   ++DKKPRRLP+HL  + GD
Sbjct:   15 AGTAEPGESKKQRRGWGKARSTSAGAAADTAENVNHAKDAGERNGRTDEHRPRKKTRSRQKNIRKDKRPADKRPAYLRAGDPEFSGRGLTEETRKFLGLPQDDFGDAPPAGWGKPGKVGPTASWVIDKKPRRLPKHLEPDAGD 157          
BLAST of mRNA_L-elsbetiae_contig562.13955.1 vs. uniprot
Match: A0A836CE61_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE61_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 9.760e-7
Identity = 44/97 (45.36%), Postives = 60/97 (61.86%), Query Frame = 0
Query:  289 ADQSSDAVEGERKVDERRPRKKTRSRQKNIRKDKRPMEKRPSYLRAGDPEFSGRGLTDETRKFLGLPADDFGNAPPAGWGKPGKMAATPVCLVDKKP 385
            A+ S   V+G+ +  +R+ R KTRSRQKNIR+DKR   +RP++L+ G  +F GR +TDETR+ LGLP+         G G  G  AA     VDK+P
Sbjct:  231 ANASYSNVDGDGQAAQRK-RTKTRSRQKNIRRDKRDTAQRPAHLQPGSDDFRGRAMTDETRQRLGLPS---------GAGDDG--AAMLTWAVDKQP 315          
BLAST of mRNA_L-elsbetiae_contig562.13955.1 vs. uniprot
Match: K0SN52_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SN52_THAOC)

HSP 1 Score: 57.0 bits (136), Expect = 3.760e-5
Identity = 36/71 (50.70%), Postives = 45/71 (63.38%), Query Frame = 0
Query:  288 GADQSSDAVEGERKVDERRPRKKTRSRQKNIRKDKRPMEKRPSYLRAGDPEFSGRGLTDETRKFLGLPADD 358
            G +   D V G  K    R RKKTRSRQKNIRKD R +E RP++L  G  +++GR LT ET+K LG+   D
Sbjct:  126 GDNTEEDGVAGRNK----RKRKKTRSRQKNIRKDNRSIEDRPTHLVRGSADYAGRPLTFETKKKLGIARTD 192          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig562.13955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KDC6_9PHAE1.480e-9762.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6V5_ECTSI1.490e-5269.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CE61_9STRA9.760e-745.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K0SN52_THAOC3.760e-550.70Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig562contigL-elsbetiae_contig562:11097..13393 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig562.13955.1mRNA_L-elsbetiae_contig562.13955.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig562 10595..13431 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig562.13955.1 ID=prot_L-elsbetiae_contig562.13955.1|Name=mRNA_L-elsbetiae_contig562.13955.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=461bp
MRSTNRGDVPNPHVAPGQDKNAADPSEDVVFDPGSLSFVKDWVVDGGDSG
SAGAGAVDIEPAREDPRQSNPNRRLGVGAQPKKSKQERPEPSALEKKLLR
KRQRQELSDAIAGEMDTHGVVSDDKDGDGESKTASFKKSNKKREGQGEGD
ATALAPLPASAAAKKKSKKSKKDKQDGAEAAVTAVTGGGDETAAGEEDGE
GEKQGRKRKARRKKSKSAATEVVAERAGAAAAAGAEAAPQTSSAIVEEQQ
SSVVVEAETADQGEPKKQRRGWGKARPKPAAASVPARGADQSSDAVEGER
KVDERRPRKKTRSRQKNIRKDKRPMEKRPSYLRAGDPEFSGRGLTDETRK
FLGLPADDFGNAPPAGWGKPGKMAATPVCLVDKKPRRLPEHLAAEGGDGS
DDGGDDGGGGGGGGRVETVEAGADIGVAMEPTGQRAPSTAAGRKKAPAKK
YKKSKYKNLA*
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