prot_L-elsbetiae_contig560.13925.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig560.13925.1
Unique Nameprot_L-elsbetiae_contig560.13925.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length856
Homology
BLAST of mRNA_L-elsbetiae_contig560.13925.1 vs. uniprot
Match: D7FH18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH18_ECTSI)

HSP 1 Score: 570 bits (1468), Expect = 2.170e-187
Identity = 430/902 (47.67%), Postives = 505/902 (55.99%), Query Frame = 0
Query:    1 GGVEDDLTPLGERRHKLPLQRKVKQLERPWKAAET--QAAEPHNLTWASSQQGNKDLPRVGVRPRSGALACRNRSRSRGSSRRMRNSASASSGXXXG-----RRRPSTGLSPSSPGVRRQRIWDNQPSSPLSVDPTWNGFDRTHWDGNGTCISRPGKPEQAHIAAVHGCGYRPGPCGGEGNGHAELVGNNQSLQTAADATLTSAISSRSSVA--------PAGAAVEVGGGEDVDVIPKASRPVS-PSSCDSSNNHDEEDSVNNKSNVSLGSVGHVSLSVSVGSGVT---LGRPNSAGVSTARDTSIHPLVIKGDKAVR-PRTAGSNRQGRAVYPRSASGESRLDERDRTPS--RPGPEKGGCP-VMSWTDEALDTGSLLECKTSVSVILPTLEEGSDTRDKRFSLGSAREISTRGESETGRGSLGQAEGLVVDIRGFQSKAKNSPEAHAQESWRRSDDTSQ------QRERGVQ---------SGSTHSNRDSTLLGPRAPHISALGYFVGGSRRPVMRS-STALHGRALVGNHH--PRPSISKQSLPSPPAITPGEQPYGVAHPLSPTSMGSPSRRHRNSNWGEEGVRLAAEEMENCRQTVPFIVSGTLLGWKLSTRERKKSLEDSLKNSDYSEHHLIPVYGFRRGNEDTNESEVVGGEGCNGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERRERAEGGAGGAAFARAMCRRATARAEWIQKMGDVLDVRKYNVCRGSSPEELRAYRKRVRDRLQGERMRQRTVKGLPSRRPPRISAITSRADFPSACRKTNNLTTNIDTAVGKRACGDERDGPDCNGDGLIPDE-LGLIRDELGREPYLMLVRAKKTTS--QEGGATHGGGITGAVVGTSV--PFCAECLGCCQGACSPSGTQVAK 856
            GG + DLTPLG+RR +LPLQRKVKQLERPWK  +   Q   PH+ TWASSQ  +KD      RPR+     R +SR+      MR S SA S    G     R RPSTGLSPSS      R+          + P W+  +        T  +     E   IA + GCGY   P  G    +   VGN + +Q + DATLTSAISS S +A        PA A+ E  GG+  D I  A + VS PS               +K+N S+ S  HVS + +V  G       RPNSA +  AR +S++PL  +    VR PRTAG +R G AV P   S +S +  R  T    RP  EK GC  V +W +E    GS +EC+ SVSV LP LE+ +DTRD+RFS GSA E STRGE             L VD R   S     PE        R  +  +      Q + G+          SG   S+RD  LLG  +PHISALGYF+   R     S S  LHGRAL G++H  PR S S+  LP PPAITPGEQPYG AHPLSPTSMGSP RRHRNSNWGEEG RLAAEE EN RQT+PF+VSGTLLGWKLSTRERKKSLEDSLK SDYSEHHLIPVYGFR  N+D  + +  GG    GR                             ERR RAEGGAGGAAFARAM RRA ARAEWIQKMGDVLDVRK NVCRGSSPE L AYRKRVR+RL GER+RQR  +GLPSR+PPRISA+TSRADFPSA  K                                    + LI+DELGREPYLMLVRA+   S  QE  +  GG     V  TS+   FC++C+G C+G CSP G + ++
Sbjct:   25 GGADGDLTPLGQRRSRLPLQRKVKQLERPWKHTDAGAQVITPHHPTWASSQPVSKDGRYPDARPRTSTPVAR-KSRASVCGVMMRTSVSAKSVRPTGCGTTARPRPSTGLSPSS-----SRL----------LSPAWSTSEPVLLSTTRTTDTAEPAVEPG-IAFIRGCGYSLDP--GRRGDNEGAVGNKRPVQISTDATLTSAISSPSLLAAMSVTTTGPA-ASTEGDGGDPDDKIVGARQVVSTPSXXXXXXXXXXXXXXXSKNNPSVESARHVSSADAVAHGAARRAAKRPNSAAI--ARASSLNPLAQRAKTDVRRPRTAGCSR-GHAVDPYLLSDDSAVIGRSITSVSFRPDLEKEGCAAVANWENE----GSSIECRPSVSVTLPMLEDCNDTRDRRFSPGSATETSTRGE-------------LGVDSRPSCSTVNCGPEEFNTAPRERPGEPRRLGVAIAQSKAGLDNRKNEALRHSGENCSSRD-PLLGTHSPHISALGYFIEEPRPQAAPSASPGLHGRALFGSNHRRPRSSPSRPPLPPPPAITPGEQPYGDAHPLSPTSMGSPPRRHRNSNWGEEGARLAAEEAENARQTIPFVVSGTLLGWKLSTRERKKSLEDSLKASDYSEHHLIPVYGFRS-NDDKEQEDDPGGTEGGGRRDRTMGVEERRKELRRVEARALAAERASMERRSRAEGGAGGAAFARAMSRRALARAEWIQKMGDVLDVRKDNVCRGSSPEVLCAYRKRVRNRLNGERLRQRKARGLPSRKPPRISAVTSRADFPSAAAKNKAQPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVSLIQDELGREPYLMLVRARSRYSLEQELSSRGGGSNKKFVASTSICARFCSDCVGGCKGTCSPDGARSSR 884          
BLAST of mRNA_L-elsbetiae_contig560.13925.1 vs. uniprot
Match: A0A6H5K6K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K0_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 9.490e-48
Identity = 120/158 (75.95%), Postives = 125/158 (79.11%), Query Frame = 0
Query:  531 MGSPSRRHRNSNWGEEGVRLAAEEMENCRQTVPFIVSGTLLGWKLSTRERKKSLEDSLKNSDYSEHHLIPVYGFRRGNEDTNESEVVGGE--GCNGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERRERAEGGAGGAAFARAMCRRATARAEWIQK 686
            MGSP RRHRNSNWGEEG RLAAEE EN RQT+PF+VSGTLLGWKLSTRERKKSLEDSLK SDYSEHHLIPVYGFR  ++   E +  G E  GC  R         XXXXXXXXXXXXXXXXXXXX R   AEGGAGGAAFARAM RRA ARAEWIQK
Sbjct:    1 MGSPPRRHRNSNWGEEGARLAAEEAENARQTIPFVVSGTLLGWKLSTRERKKSLEDSLKASDYSEHHLIPVYGFRSSDDKEKEDDPGGTEEGGCRDRTMGVEERRVXXXXXXXXXXXXXXXXXXXXXR---AEGGAGGAAFARAMSRRALARAEWIQK 155          
BLAST of mRNA_L-elsbetiae_contig560.13925.1 vs. uniprot
Match: A0A6H5K4K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4K6_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 4.540e-38
Identity = 153/399 (38.35%), Postives = 200/399 (50.13%), Query Frame = 0
Query:    1 GGVEDDLTPLGERRHKLPLQRKVKQLERPWKAAETQAAEPHNLTWASSQQGNKDLPRVGVRPRSGALACRNRSRSRGSSRRMRNSASASSGXXXG-----RRRPSTGLSPSSPGVRRQRIWDNQPSSPLSVDPTWNGFDRTHWDGNGTCISRPGKPEQAHIAAVHGCGYRPGPCGGEGNGHAELVGNNQSLQTAADATLTSAISSRS-----SVAPAGAAVEVGGGEDVDVIPKASRPV--SPSSCDSSNNHDEEDSVNNKSNVSLGSVGHVSLSVSVGSGVT---LGRPNSAGVSTARDTSIHPLVIKGDKAVR-PRTAGSNRQGRAVYPRSASGESRLDERDRTPS--RPGPEKGGCP-VMSWTDEALDTGSLLECKTSVSVILPTLEEGSDTRDKR 380
            GG + DLTPLG+RR++LPLQRKVKQ+             PH+ TWASSQ  +KD      RPR+     R  + S G    MR S SA S    G     R RPS GLSPSS G+R                P W+  +        T  +     E      + GCGYR  P  G G  +   +GN   +QT+  ATLTS ISS S     SVA  G A    G  D D     +R +  +PS   + N +D+E+  N+++N  +GS  HVS + +V  G       RPNSA +  AR +S+HPL  +    VR PRTAG +R G+A+ P     +S +  R  T +  RP  EK GC  V +W +E    GS +E + SVSV LP LEE +DTRD+R
Sbjct:   25 GGADSDLTPLGQRRNRLPLQRKVKQV-----------TTPHHPTWASSQPISKDGRYPDARPRTSTPVGRRTAASVGGVM-MRTSVSAKSVRSTGCGTAARTRPSNGLSPSSSGLR---------------SPAWSTSEPVRLSTTRTTDTAESAVELG-TTFIRGCGYRLDP--GRGGDNEGALGNKHPVQTSTGATLTSTISSPSLLAAMSVATTGPAASTEGDGDPDDKIGGARQIGSTPSGSSNKNFNDDEEDGNSENNPPMGSARHVSSADAVAHGGARRAAKRPNSAAI--ARASSLHPLARRAKTDVRRPRTAGCSR-GQAIDPYLLLDDSAVIGRSITSASFRPDLEKEGCAAVANWENE----GSSIEWRPSVSVTLPMLEECNDTRDRR 386          
BLAST of mRNA_L-elsbetiae_contig560.13925.1 vs. uniprot
Match: A0A6H5K5A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A9_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 2.160e-36
Identity = 88/174 (50.57%), Postives = 105/174 (60.34%), Query Frame = 0
Query:  687 MGDVLDVRKYNVCRGSSPEELRAYRKRVRDRLQGERMRQRTVKGLPSRRPPRISAITSRADFPSACRKTNNLTTNIDTAVGKRACGDERDGPDCNGDGLIPDELGLIRDELGREPYLMLVRAKKTTS--QEGGATHGGGITGAVVGTSVP--FCAECLGCCQGACSPSGTQVAK 856
            MGDVLDVRK NVCRGSSPE L AYRKRVR+RL GER RQR  +GLPSR+PPRISAITSRADFPSA                                      + LI+DELGREPYLMLVRA+  +S  QE  +  GG    +V  T++   FC++C+G C+G CSP G +  +
Sbjct:    1 MGDVLDVRKENVCRGSSPEVLCAYRKRVRNRLNGERRRQRMARGLPSRKPPRISAITSRADFPSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSLIQDELGREPYLMLVRARSRSSLEQELSSRGGGSNKKSVASTNISARFCSDCVGGCKGTCSPDGARSGR 174          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig560.13925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FH18_ECTSI2.170e-18747.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6K0_9PHAE9.490e-4875.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4K6_9PHAE4.540e-3838.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A9_9PHAE2.160e-3650.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 632..652

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig560contigL-elsbetiae_contig560:12741..16930 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig560.13925.1mRNA_L-elsbetiae_contig560.13925.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig560 12741..16930 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig560.13925.1 ID=prot_L-elsbetiae_contig560.13925.1|Name=mRNA_L-elsbetiae_contig560.13925.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=856bp
GGVEDDLTPLGERRHKLPLQRKVKQLERPWKAAETQAAEPHNLTWASSQQ
GNKDLPRVGVRPRSGALACRNRSRSRGSSRRMRNSASASSGSSSGRRRPS
TGLSPSSPGVRRQRIWDNQPSSPLSVDPTWNGFDRTHWDGNGTCISRPGK
PEQAHIAAVHGCGYRPGPCGGEGNGHAELVGNNQSLQTAADATLTSAISS
RSSVAPAGAAVEVGGGEDVDVIPKASRPVSPSSCDSSNNHDEEDSVNNKS
NVSLGSVGHVSLSVSVGSGVTLGRPNSAGVSTARDTSIHPLVIKGDKAVR
PRTAGSNRQGRAVYPRSASGESRLDERDRTPSRPGPEKGGCPVMSWTDEA
LDTGSLLECKTSVSVILPTLEEGSDTRDKRFSLGSAREISTRGESETGRG
SLGQAEGLVVDIRGFQSKAKNSPEAHAQESWRRSDDTSQQRERGVQSGST
HSNRDSTLLGPRAPHISALGYFVGGSRRPVMRSSTALHGRALVGNHHPRP
SISKQSLPSPPAITPGEQPYGVAHPLSPTSMGSPSRRHRNSNWGEEGVRL
AAEEMENCRQTVPFIVSGTLLGWKLSTRERKKSLEDSLKNSDYSEHHLIP
VYGFRRGNEDTNESEVVGGEGCNGRGGGGCGAEERRMELRRLEARALAAE
RMSLERRERAEGGAGGAAFARAMCRRATARAEWIQKMGDVLDVRKYNVCR
GSSPEELRAYRKRVRDRLQGERMRQRTVKGLPSRRPPRISAITSRADFPS
ACRKTNNLTTNIDTAVGKRACGDERDGPDCNGDGLIPDELGLIRDELGRE
PYLMLVRAKKTTSQEGGATHGGGITGAVVGTSVPFCAECLGCCQGACSPS
GTQVAK
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