prot_L-elsbetiae_contig5595.13913.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5595.13913.1
Unique Nameprot_L-elsbetiae_contig5595.13913.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length300
Homology
BLAST of mRNA_L-elsbetiae_contig5595.13913.1 vs. uniprot
Match: A0A6H5KXH5_9PHAE (CMD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXH5_9PHAE)

HSP 1 Score: 354 bits (909), Expect = 5.670e-118
Identity = 182/295 (61.69%), Postives = 221/295 (74.92%), Query Frame = 0
Query:    1 MGPAAGDDVKMNAIQRFYTTKDPDLAFPLVEGESRV-NHDFGAWSISHRDGEPKPIPCTPDQVPEFLGTVMLFGMLNRIVDAFVSKQDSGPMFPLPIRMMMRSPTATPMVQRMMGRMMSWMMKGEDKKIAAGKVLKDINTVTPIIKGFEGAADEPPLPLPEAMSWAATGSDETIGVTFAFLAAEAEIMAQCYVSSALKTHMKSWVSKWDG--AKTRPTKEWLES--QVAESGFGADDKADVAMLRLMLVTVTASHAIDDTLLSECQAMLGFRGTHAAVLWSSFLAGQRLCQRAFA 290
            MGPAAGDDV  ++++ FY T+D D AFP+ EG+  + N+   +WSI HRDG+ +  PCTP+Q+PE +GT MLF +LNR+VD FVSK ++GPMFPLP+RMMM+   ATP++QR M  MMSWMM GED K+ AGKVLK+IN V PIIKGF G ADE P+ LPE +SWA TG DETI   FAFLAAEAE++A  +V  A+K+  +SWVS WDG  A+    +EWL    +V  SG G  DK DV MLRLMLVT+ ASH  DDTLLSECQA+ GFRGTHAAVLWS+FLAGQR CQ A A
Sbjct:  128 MGPAAGDDVDFDSLRLFYQTQDADAAFPVGEGQDPMSNNTLASWSIRHRDGKEQAAPCTPEQLPEVVGTAMLFDILNRVVDTFVSKTEAGPMFPLPMRMMMKVQPATPLLQRAMSWMMSWMMHGEDVKVEAGKVLKEINEVHPIIKGFRGCADETPMALPEQLSWA-TGGDETIAAAFAFLAAEAELLAHAFVPPAVKSFTESWVSSWDGGAAQIGELEEWLGPTVRVTASGLGEGDKGDVVMLRLMLVTIVASHRTDDTLLSECQAIHGFRGTHAAVLWSAFLAGQRSCQLAIA 421          
BLAST of mRNA_L-elsbetiae_contig5595.13913.1 vs. uniprot
Match: A0A7K1L942_9ACTN (Carboxymuconolactone decarboxylase n=5 Tax=Actinomadura TaxID=1988 RepID=A0A7K1L942_9ACTN)

HSP 1 Score: 54.7 bits (130), Expect = 7.140e-5
Identity = 70/245 (28.57%), Postives = 103/245 (42.04%), Query Frame = 0
Query:   56 PCTPDQVPEFLGTVMLFGMLNRIVDAFVSKQDSGPMFPLPIRMMMRSPTATPMVQRMMGRMMSWMMKGEDKKIAAGKVLKDINTVTPIIKGFEGAADEPPLPLPEAMSWAATGSDETIGVTFAFL-AAEAEIMAQCYVSSALKTHMKSWVSKWDGAKTRPTKEWLESQVAESGFGADDKADVAMLRLMLVTVTASHAIDDTLLSECQAMLGFRGTHAAVL-WSSFLAGQRLCQRAFAAGLVAPSG 298
            P   +  PE++G ++ F  LNR+V+ F+      P  P   R         PM+ R++GRM         ++I +  V                AA  P  PLP  ++WAA     T  V  AF  AA A   A   V   ++  +++ V+ WDG+    +K W     AE   GA    D    RL L+T  ASH +    ++  +A+    GT   +  W+SF A +    R  AAG  A  G
Sbjct:  124 PFPDEHAPEYIGVLVTFEYLNRMVNLFLDDSPLPPSVPGAAR--------DPMM-RLLGRMTR-------RRIRSPGV---------------SAALLPAAPLPGDLAWAA----RTPHVAEAFARAAAAFXXAGAAVPPPVRDLVRAQVAAWDGSPKGLSKGW-----AEEAAGALHPVDRPAGRLALLTAFASHQVGARDVAAFRAVRPDDGTLVGLAAWASFTAARAAGARVHAAGPSAERG 328          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5595.13913.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KXH5_9PHAE5.670e-11861.69CMD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7K1L942_9ACTN7.140e-528.57Carboxymuconolactone decarboxylase n=5 Tax=Actinom... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5595contigL-elsbetiae_contig5595:4387..9017 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5595.13913.1mRNA_L-elsbetiae_contig5595.13913.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5595 2411..9102 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5595.13913.1 ID=prot_L-elsbetiae_contig5595.13913.1|Name=mRNA_L-elsbetiae_contig5595.13913.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=300bp
MGPAAGDDVKMNAIQRFYTTKDPDLAFPLVEGESRVNHDFGAWSISHRDG
EPKPIPCTPDQVPEFLGTVMLFGMLNRIVDAFVSKQDSGPMFPLPIRMMM
RSPTATPMVQRMMGRMMSWMMKGEDKKIAAGKVLKDINTVTPIIKGFEGA
ADEPPLPLPEAMSWAATGSDETIGVTFAFLAAEAEIMAQCYVSSALKTHM
KSWVSKWDGAKTRPTKEWLESQVAESGFGADDKADVAMLRLMLVTVTASH
AIDDTLLSECQAMLGFRGTHAAVLWSSFLAGQRLCQRAFAAGLVAPSGD*
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