prot_L-elsbetiae_contig5590.13910.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5590.13910.1
Unique Nameprot_L-elsbetiae_contig5590.13910.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length152
Homology
BLAST of mRNA_L-elsbetiae_contig5590.13910.1 vs. uniprot
Match: D8LHI3_ECTSI (ARL2_Bind_BART domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHI3_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 1.880e-42
Identity = 66/85 (77.65%), Postives = 81/85 (95.29%), Query Frame = 0
Query:   68 ARKHHEPFLETAGEGEWSSPGGVEHKLEFTEIYHLFLRHFEDKISGFLKDEAGGTDEQFQRECKKALATLDEFSPRRFFVEILLA 152
            +RKHHEPFL+TA EG+W+SPG VEHKLEFTE+Y+LFLRHFE+KISGF+++EAGGT EQFQ+EC++AL TL+EFSPRRFF+EILLA
Sbjct:   37 SRKHHEPFLDTADEGQWTSPGEVEHKLEFTEVYNLFLRHFENKISGFIEEEAGGTVEQFQQECEEALQTLEEFSPRRFFIEILLA 121          
BLAST of mRNA_L-elsbetiae_contig5590.13910.1 vs. uniprot
Match: A0A6H5JKV0_9PHAE (ARL2_Bind_BART domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKV0_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 1.530e-41
Identity = 66/84 (78.57%), Postives = 77/84 (91.67%), Query Frame = 0
Query:   69 RKHHEPFLETAGEGEWSSPGGVEHKLEFTEIYHLFLRHFEDKISGFLKDEAGGTDEQFQRECKKALATLDEFSPRRFFVEILLA 152
            RKHHEPFL TA EG+W+SP  VEHKLEFTE+Y+LFL HFEDKISGF+++EAGGT EQFQ+ECK+AL TL+EFSPRRFF+EILLA
Sbjct:   38 RKHHEPFLNTADEGQWTSPAEVEHKLEFTEVYNLFLTHFEDKISGFIEEEAGGTVEQFQQECKEALLTLEEFSPRRFFIEILLA 121          
BLAST of mRNA_L-elsbetiae_contig5590.13910.1 vs. uniprot
Match: F0XZQ0_AURAN (ARL2_Bind_BART domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZQ0_AURAN)

HSP 1 Score: 67.4 bits (163), Expect = 3.610e-10
Identity = 45/137 (32.85%), Postives = 65/137 (47.45%), Query Frame = 0
Query:   16 DNVGKRMADNRGDDSMGXXXXXXXXXAASFALLDKVQEFCASQFLEEDFEEFARKHHEPFLETAGEGEWSSPGGVEHKLEFTEIYHLFLRHFEDKISGFLKDEAGGTDEQFQRECKKALATLDEFSPRRFFVEILLA 152
            D  GK  +D R   S G          A   L+ +V++         +FE FA KH EPFL+   +GE  +  G +H   F + Y ++L HFE ++   +   AG T   F    ++AL    +F P RFF+E LLA
Sbjct: 1123 DRFGKIASDRR--SSKGGEEKEERKMGAD-GLIGEVRKVLMGAEFVREFETFAEKHIEPFLDALVKGESPTSDGGDHSHSFYDTYKVYLEHFERRVEQHIV-AAGATVGDFMAVAREALENASDFDPNRFFLEALLA 1255          
BLAST of mRNA_L-elsbetiae_contig5590.13910.1 vs. uniprot
Match: A0A7S2SVE5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVE5_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.020e-8
Identity = 29/62 (46.77%), Postives = 41/62 (66.13%), Query Frame = 0
Query:   91 EHKLEFTEIYHLFLRHFEDKISGFLKDEAGGTDEQFQRECKKALATLDEFSPRRFFVEILLA 152
            EH+LE+ ++Y  +L  FE KI  F+ +  G + ++FQ  C+K L    EFSP+RFFVE LLA
Sbjct:   31 EHRLEYYDVYREYLDEFEKKIHTFI-ERTGHSVDEFQTACQKVLEEEGEFSPKRFFVEALLA 91          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5590.13910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LHI3_ECTSI1.880e-4277.65ARL2_Bind_BART domain-containing protein n=1 Tax=E... [more]
A0A6H5JKV0_9PHAE1.530e-4178.57ARL2_Bind_BART domain-containing protein n=1 Tax=E... [more]
F0XZQ0_AURAN3.610e-1032.85ARL2_Bind_BART domain-containing protein n=1 Tax=A... [more]
A0A7S2SVE5_9STRA1.020e-846.77Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042541BART domain superfamilyGENE3D1.20.58.1900coord: 37..152
e-value: 6.7E-7
score: 31.0
IPR023379BART domainPFAMPF11527ARL2_Bind_BARTcoord: 47..138
e-value: 4.3E-7
score: 30.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5590contigL-elsbetiae_contig5590:3588..10780 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5590.13910.1mRNA_L-elsbetiae_contig5590.13910.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5590 3586..10780 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5590.13910.1 ID=prot_L-elsbetiae_contig5590.13910.1|Name=mRNA_L-elsbetiae_contig5590.13910.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=152bp
GGLWCSGLSLHGVVHDNVGKRMADNRGDDSMGESKGEAKEEAASFALLDK
VQEFCASQFLEEDFEEFARKHHEPFLETAGEGEWSSPGGVEHKLEFTEIY
HLFLRHFEDKISGFLKDEAGGTDEQFQRECKKALATLDEFSPRRFFVEIL
LA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042541BART_sf
IPR023379BART_dom