prot_L-elsbetiae_contig5578.13894.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5578.13894.1
Unique Nameprot_L-elsbetiae_contig5578.13894.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length574
Homology
BLAST of mRNA_L-elsbetiae_contig5578.13894.1 vs. uniprot
Match: D8LJP0_ECTSI (Sart3 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJP0_ECTSI)

HSP 1 Score: 493 bits (1269), Expect = 1.320e-159
Identity = 386/573 (67.36%), Postives = 420/573 (73.30%), Query Frame = 0
Query:    1 QARRQWERVLRHSGKCLASWAEAVKWERGTTGDLAACRRLYARSLKEVQDFPQAACTAYLNFEQETGSLQDWDAANKEVFSSRAARGLLSRDLPLASRAWTGGAAAQPLHQPTQRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVESGDAARSGGTKDGNKXXXXXXXXXXXXXXEQATTAIREPAGKKRGRGYQDEEGAAKTGGGGDVEGLTAFVVNLPFSTTHAGLKDMFKACGAEITGTRVLTNPKGRPKGLGYVTFASEEALVKALALDGTDIDGRAVSVQRALPRGARPAKGATAPKAATPKPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIKWPVHPTTVFVRGLGMSATSEDLRGAFVGAGAVVEARVVEDKKTRETKGYGLVQFEEAEAVEKALAMDGTGMCGGTAKVTRSRHPAVVVAPXXXXXXGGSKETTRESDAPAXXXXXXXXXXXXNSSGGRRANDWDCPGAGCDNVCFSFRTSCNRCGTGRDGAPPPTGFRQAGXXXXXXXGGLDGEPVVATLHRPRLQLG 573
            QARRQW+RVLRHSGK L SW EA+KWER +TGDLAACRRLYARSL EVQD+P+AACTAYLNFE+E GSL+DWDAANK VF+SRA+RGLLSRDLPLASR+W GG AA+PLHQPTQRQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    XXXXXXXXXXXXX              +G+G    + AA  GG G VEGLT FV+NLPFS   AGL+ +F+ CG E+  TRVLT P GR KGLGYVTFA+EEAL KALALDGTD+DGR +SVQR+LPRG+R  KG +           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         GIKWP HPTTVFVRGLG+SATS+DLR AFVG G +VEARVVEDK+TRETKGYGLVQFEE EAVEKALA+DGT MCGGTA++TRSRHPAVV APXXXXXX              X               GRRANDWDCP   CDNVCFSFRT CNRCG G+DG PPP   +                 VVAT HRPRLQLG
Sbjct:  487 QARRQWDRVLRHSGKRLVSWEEAIKWERRSTGDLAACRRLYARSLNEVQDYPEAACTAYLNFEEEIGSLEDWDAANKGVFNSRASRGLLSRDLPLASRSWAGGVAARPLHQPTQRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXADKGKGLPGNQAAAG-GGPGGVEGLTVFVMNLPFSAADAGLRGVFQGCG-EVASTRVLTGPNGRSKGLGYVTFANEEALAKALALDGTDMDGRTLSVQRSLPRGSRSVKGGS-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEVVVAASGIKWPAHPTTVFVRGLGLSATSQDLREAFVGVGPMVEARVVEDKRTRETKGYGLVQFEEGEAVEKALALDGTSMCGGTAQITRSRHPAVVAAPXXXXXXXXXXXXXXXXXXXXXADGK-----------GRRANDWDCPSPDCDNVCFSFRTKCNRCGMGKDGTPPPKELQXX----------XXXNSVVATQHRPRLQLG 1020          
BLAST of mRNA_L-elsbetiae_contig5578.13894.1 vs. uniprot
Match: A0A7S4VPP0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VPP0_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 2.680e-10
Identity = 65/230 (28.26%), Postives = 92/230 (40.00%), Query Frame = 0
Query:  225 TAFVVNLPFSTTHAGLKDMFKACGAEITGTRVLTNPK-GRPKGLGYVTFASEEALVKALALDGTDIDGRAVSVQRALPRGARPAKGATAPKAATPKPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIKWPVHPTTVFVRGLGMSATSEDLRGAFVGAGAVVEARVVEDKKTRETKGYGLVQFEEAEAVEKALAMDGTGMCGGTAKV 453
            + FV NL FS     ++D FK CG  IT  R   + + G  KG  ++ F   EA  KA+A++GT+I GRAV V  A+     P +        +  P                                                    G K       VF+  L  +   + LRGAF   G +   R  ED++T E KG+  ++FEE EA +KA+AM GT + G   +V
Sbjct:  110 SVFVANLSFSIDEETVRDTFKDCGT-ITAIRFGEDRETGEFKGYAFMDFEETEATDKAVAMNGTEIMGRAVRVDHAIKPTFTPGRXXXXXXXXSFTPSEKEE-----------------------------------------------GCK------QVFIGNLSFNIDEDSLRGAFKDCGTITSIRFGEDRETGEFKGFAHMEFEETEATDKAVAMAGTDIMGRAVRV 285          
BLAST of mRNA_L-elsbetiae_contig5578.13894.1 vs. uniprot
Match: A0A7S1B5U4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B5U4_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 3.690e-10
Identity = 40/91 (43.96%), Postives = 55/91 (60.44%), Query Frame = 0
Query:  374 IKWPVHPTTVFVRGLGMSATSEDLRGAFVGAGAVVEARVVEDK---KTRETKGYGLVQFEEAEAVEKALAMDGT-GMCGGTAKVTRSRHPA 460
            +++P HPTT+ V GL    T  +L    +  G V+  RVV  +   +  E+KGYGLVQF++  +V+ AL MDG  G+ GGT KV RS  PA
Sbjct:  159 LEYPAHPTTIHVSGLRADVTDRELVDLLLPCGPVIHGRVVRHRAGPRRFESKGYGLVQFQDQGSVDSALKMDGERGLRGGTVKVVRSHVPA 249          
BLAST of mRNA_L-elsbetiae_contig5578.13894.1 vs. uniprot
Match: A0A507C539_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C539_9FUNG)

HSP 1 Score: 72.8 bits (177), Expect = 9.360e-10
Identity = 64/243 (26.34%), Postives = 103/243 (42.39%), Query Frame = 0
Query:  222 EGLTAFVVNLPFSTTHAGLKDMFKACGAEITGTRVLTNPK-GRPKGLGYVTFASEEALVKALALDGTDIDGRAVSVQRALP---RGARPAKGATAPK------AATPKPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIKWPVHPTTVFVRGLGMSATSEDLRGAFVGAGAVVEARVVEDKKTRETKGYGLVQFEEAEAVEKAL-AMDGTGMCGGTAKV 453
            E  T FV NL ++ T   L + F + G E+   R++T+ + G+PKG GYVTFAS E    A++++G+D+DGRA+ +  A P   +G RP+ G  A K      A T  P A                                                           T+FV  +    + + LR  F   G V   R+  D+++   KG+  V+F + +  +KAL  ++GT + G + ++
Sbjct:  380 ESNTIFVGNLSWNVTEEWLVEHFGSSG-EVASARIITDRESGKPKGFGYVTFASTEGAKSAMSMNGSDLDGRALRIDIAAPPTPKGDRPSNGRDAGKFGGRAEAPTSPPSA-----------------------------------------------------------TLFVANMSFGCSEDTLRDVFGTYGDVSSVRIPTDRESGRPKGFAYVEFFDVDTAKKALEGVNGTDIEGRSVRI 562          
BLAST of mRNA_L-elsbetiae_contig5578.13894.1 vs. uniprot
Match: A0A813IX37_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IX37_POLGL)

HSP 1 Score: 70.9 bits (172), Expect = 9.990e-10
Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = 0
Query:  198 AGKKRGRGYQDEEGAAKTGGGGDVEGLTAFVVNLPFSTTHAGLKDMFKACGAEITGTRVLTNPKGRPKGLGYVTFASEEALVKALALDGTDIDGRAVSVQRALPRGARPAKGA 310
            AG KR +   D+  AA      D   L  FV  +PFS+     +  F+ACG+ I+   +  + +GR KG+ ++TF S+E + KAL  DGTD DGR +SV  A  R     +GA
Sbjct:  168 AGGKRKKAGDDK--AATKDAPSDKNHLKVFVGGIPFSSDEKSFRGFFQACGS-ISSLNLQRDDQGRLKGIAFITFKSKEGVTKALEYDGTDYDGRTLSVNMASQRSGGAKQGA 277          
BLAST of mRNA_L-elsbetiae_contig5578.13894.1 vs. uniprot
Match: A0A3A6P0U8_9DELT (RNA-binding protein n=1 Tax=Desulfarculus sp. TaxID=2093367 RepID=A0A3A6P0U8_9DELT)

HSP 1 Score: 64.3 bits (155), Expect = 3.040e-9
Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 0
Query:  223 GLTAFVVNLPFSTTHAGLKDMFKACGAEITGTRVLTNPKGRPKGLGYVTFASEEALVKALALDGTDIDGRAVSVQRALPRGARPAK 308
            G   +V NL F+TT  GL+  F+  G  ++   +     GRP+G G+V    + A     A++G ++DGRA+ V  A PR ARP K
Sbjct:    2 GKNIYVGNLAFNTTEEGLRSAFEEYGTVLSAKIITDRDTGRPRGFGFVEMEGDGAEAAIQAMNGQELDGRALKVNEARPREARPPK 87          
BLAST of mRNA_L-elsbetiae_contig5578.13894.1 vs. uniprot
Match: A0A836CBQ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBQ9_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 3.250e-9
Identity = 71/238 (29.83%), Postives = 99/238 (41.60%), Query Frame = 0
Query:  222 EGLTAFVVNLPFSTTHAGLKDMFKACGAEITGTRVLTNPKGRPKGLGYVTFASE-EALVKALALDGTDIDGRAVSVQRALPRGARPAKGATAPKAATPKPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIKWPVHPTTVFVRGLGMSATSEDLRGAFVGAGAVVEARVVEDKKTRETKGYGLVQFEEAEAVEKALA-MDGTGMCGGTAKVTRSR 457
            +G   +V NL + TT   L+  F   G     T V     G  +G G++T++S  EA   A  LDG ++DGR + V  + PR  R                                                           XXXXXXXX     V  + +FV  LG   TSEDL+ AF   G VV+A+VV D++T  ++G+G V F+  EA E A+  MDG  + G   +V  S+
Sbjct:  178 DGCKLYVGNLGYDTTADQLESRFAEYGTISDLTVVTDRDTGNSRGFGFITYSSAAEAAAAADNLDGAEVDGRTIRVNISRPRAER---------------------------------------------------NTFSEGGGXXXXXXXXXXDSAVDSSKLFVGNLGWDTTSEDLQQAFAQYGDVVDAKVVTDRETGNSRGFGFVTFQSTEAAENAIGGMDGMELDGREIRVNISQ 364          
BLAST of mRNA_L-elsbetiae_contig5578.13894.1 vs. uniprot
Match: A0A4Y7PFV3_9AGAM (RNA-binding domain-containing protein n=1 Tax=Rickenella mellea TaxID=50990 RepID=A0A4Y7PFV3_9AGAM)

HSP 1 Score: 70.5 bits (171), Expect = 4.100e-9
Identity = 55/221 (24.89%), Postives = 87/221 (39.37%), Query Frame = 0
Query:  219 GDVEGLTAFVVNLPFSTTHAGLKDMFKACGAEITGTRVLTNPKGRPKGLGYVTFASEEALVKALALDGTDIDGRAVSVQRALPRGARPAKGATAPKAATPKPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIKWPVHPTTVFVRGLGMSATSEDLRGAFVGAGAVVEARVVEDKKTRETKGYGLVQFEEAEAVEKAL 439
            GD    + FV  L ++  +  L   F  CG  ++    +    G+ +G GYV FA+ EA+ KA+AL+G +IDGRAV++ ++ PR   P K A A      +P +                                                           T+FV  +    T ++L   F   G V   R+  D+ T+  KG+G V+F + E+ +KA 
Sbjct:  255 GDEATKSIFVGRLSWNVDNDWLAQEFAECGEVVSARVQMDRNTGKSRGFGYVEFATAEAVEKAVALNGKEIDGRAVNIDKSSPRAPNPEKRAKAFGDVASEPSS-----------------------------------------------------------TLFVGNVSFDTTEDNLWEVFAEYGEVKSVRLPTDRDTQRPKGFGYVEFTDLESAKKAF 416          
BLAST of mRNA_L-elsbetiae_contig5578.13894.1 vs. uniprot
Match: Q4UFE0_THEAN (Nucleolar, RNA-binding protein, putative n=2 Tax=Theileria annulata TaxID=5874 RepID=Q4UFE0_THEAN)

HSP 1 Score: 70.1 bits (170), Expect = 5.800e-9
Identity = 37/84 (44.05%), Postives = 56/84 (66.67%), Query Frame = 0
Query:  230 NLPFSTTHAGLKDMFKACGAEITGTRVLTNPK----GRPKGLGYVTFASEEALVKALALDGTDIDGRAVSVQRALPRGARPAKG 309
            NL F+++  GL+++F  CG ++T   V   PK    G+P G+G+++F + EA  +A+  D TDIDGR VS+Q ALPRG R ++G
Sbjct:  427 NLNFNSSEEGLRELFSECG-QVTRCYV---PKFQDTGKPMGIGFISFTTVEAAKRAVEYDNTDIDGRTVSIQFALPRGGRSSRG 506          
BLAST of mRNA_L-elsbetiae_contig5578.13894.1 vs. uniprot
Match: A0A0C9YYR7_9AGAM (Uncharacterized protein n=1 Tax=Pisolithus microcarpus 441 TaxID=765257 RepID=A0A0C9YYR7_9AGAM)

HSP 1 Score: 70.1 bits (170), Expect = 6.320e-9
Identity = 65/249 (26.10%), Postives = 99/249 (39.76%), Query Frame = 0
Query:  210 EGAAKTGGGGDVEGLTAFVVNLPFSTTHAGLKDMFKACGAEITGTRVLTNPKGRPKGLGYVTFASEEALVKALALDGTDIDGRAVSVQRALPRGARPAKGATAPKAATPKPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIKWPVHPTTVFVRGLGMSATSEDLRGAFVGAGAVVEARVVEDKKTRETKGYGLVQFEEAEAVEKAL-AMDGTGMCGGTAKVTRSR 457
            +GAA+     D +  + FV  L ++  +  L   F +CG   +    +    GR +G GYV F S +A+ KALA+DG +IDGR + V R+      P K A+A K A                                                        G K     + +FV  L  +AT +DL   F   G V   R+  D++T   KG+  V+F + EA +KA  A++G    G   ++  S+
Sbjct:  335 DGAAEPTATSDEDSKSIFVGKLSWNVDNDWLAQEFSSCGEVESAHVQMDRTTGRSRGFGYVHFTSADAVEKALAMDGKEIDGRPIRVDRST----SPDKKASADKRAQ-----------------------------------------------------AFGDKQSPASSVLFVGNLSFNATEDDLWETFGEHGDVKSVRIPTDRETGRAKGFAYVEFSDMEAAKKAYDALNGFDFDGRAVRLDFSQ 526          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5578.13894.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJP0_ECTSI1.320e-15967.36Sart3 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
A0A7S4VPP0_9STRA2.680e-1028.26Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1B5U4_9STRA3.690e-1043.96Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A507C539_9FUNG9.360e-1026.34Uncharacterized protein n=1 Tax=Synchytrium microb... [more]
A0A813IX37_POLGL9.990e-1038.05Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A3A6P0U8_9DELT3.040e-937.21RNA-binding protein n=1 Tax=Desulfarculus sp. TaxI... [more]
A0A836CBQ9_9STRA3.250e-929.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4Y7PFV3_9AGAM4.100e-924.89RNA-binding domain-containing protein n=1 Tax=Rick... [more]
Q4UFE0_THEAN5.800e-944.05Nucleolar, RNA-binding protein, putative n=2 Tax=T... [more]
A0A0C9YYR7_9AGAM6.320e-926.10Uncharacterized protein n=1 Tax=Pisolithus microca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 382..454
e-value: 9.9E-16
score: 68.3
coord: 225..297
e-value: 1.5E-13
score: 61.0
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 383..445
e-value: 1.2E-13
score: 50.6
coord: 227..294
e-value: 3.2E-13
score: 49.3
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 224..301
score: 14.948
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 381..458
score: 15.426
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 110..311
e-value: 1.9E-21
score: 78.7
coord: 314..460
e-value: 1.5E-19
score: 72.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..91
e-value: 1.3E-5
score: 26.5
NoneNo IPR availableGENE3D4.10.1060.10coord: 497..537
e-value: 3.4E-9
score: 37.8
NoneNo IPR availablePANTHERPTHR23003:SF3FI21236P1coord: 227..457
coord: 120..297
NoneNo IPR availablePANTHERPTHR23003RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEINcoord: 227..457
coord: 120..297
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 504..535
score: 8.569
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 496..535
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 218..305
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 377..460

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5578contigL-elsbetiae_contig5578:675..7307 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5578.13894.1mRNA_L-elsbetiae_contig5578.13894.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5578 675..7307 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5578.13894.1 ID=prot_L-elsbetiae_contig5578.13894.1|Name=mRNA_L-elsbetiae_contig5578.13894.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=574bp
QARRQWERVLRHSGKCLASWAEAVKWERGTTGDLAACRRLYARSLKEVQD
FPQAACTAYLNFEQETGSLQDWDAANKEVFSSRAARGLLSRDLPLASRAW
TGGAAAQPLHQPTQRQQQPRLKKQQQEAGDRGNKRASANNKRSAPGPPPP
SAGTAGVESGDAARSGGTKDGNKRARTTAAAVDGAGGEQATTAIREPAGK
KRGRGYQDEEGAAKTGGGGDVEGLTAFVVNLPFSTTHAGLKDMFKACGAE
ITGTRVLTNPKGRPKGLGYVTFASEEALVKALALDGTDIDGRAVSVQRAL
PRGARPAKGATAPKAATPKPEAAAAGDGDGGGDGDGDTEGANKKAKKKKK
KKAEGDVVVFGAGSGGGGGGGGGIKWPVHPTTVFVRGLGMSATSEDLRGA
FVGAGAVVEARVVEDKKTRETKGYGLVQFEEAEAVEKALAMDGTGMCGGT
AKVTRSRHPAVVVAPAPAPAPGGSKETTRESDAPAAGAAGAAGGGDGNSS
GGRRANDWDCPGAGCDNVCFSFRTSCNRCGTGRDGAPPPTGFRQAGGGGG
GRGGGLDGEPVVATLHRPRLQLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR011990TPR-like_helical_dom_sf
IPR001876Znf_RanBP2
IPR036443Znf_RanBP2_sf
IPR035979RBD_domain_sf